RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 IRS2Q9Y4H2 1338 aa16.72■□□□□ 0.27
CCDC130-202ENST00000540216 USP17L3A6NCW0 530 aa16.72■□□□□ 0.27
CCDC130-202ENST00000540216 USP17L4A6NCW7 530 aa16.72■□□□□ 0.27
CCDC130-202ENST00000540216 POTEIP0CG38 1075 aa16.72■□□□□ 0.27
CCDC130-202ENST00000540216 POTEJP0CG39 1038 aa16.72■□□□□ 0.27
CCDC130-202ENST00000540216 MTX1Q13505 466 aa16.72■□□□□ 0.27
CCDC130-202ENST00000540216 USP17L1Q7RTZ2 530 aa16.72■□□□□ 0.27
CCDC130-202ENST00000540216 ZNF804AQ7Z570 1209 aa16.72■□□□□ 0.27
CCDC130-202ENST00000540216 TXNRD3Q86VQ6 643 aa16.72■□□□□ 0.27
CCDC130-202ENST00000540216 H7C1D1 291 aa16.71■□□□□ 0.27
CCDC130-202ENST00000540216 EYA2O00167 538 aa16.71■□□□□ 0.27
CCDC130-202ENST00000540216 PLIN1O60240 522 aa16.71■□□□□ 0.27
CCDC130-202ENST00000540216 CIAO1O76071 339 aa16.71■□□□□ 0.27
CCDC130-202ENST00000540216 GNAI2P04899 355 aa16.71■□□□□ 0.27
CCDC130-202ENST00000540216 KLRK1P26718 216 aa16.71■□□□□ 0.27
CCDC130-202ENST00000540216 APLP1P51693 650 aa16.71■□□□□ 0.27
CCDC130-202ENST00000540216 PTPN12Q05209 780 aaKnown RBP16.71■□□□□ 0.27
CCDC130-202ENST00000540216 METTL24Q5JXM2 366 aa16.71■□□□□ 0.27
CCDC130-202ENST00000540216 RSBN1LQ6PCB5 846 aaPredicted RBP16.71■□□□□ 0.27
CCDC130-202ENST00000540216 AGBL3Q8NEM8 1001 aa16.71■□□□□ 0.27
CCDC130-202ENST00000540216 KCNQ5Q9NR82 932 aa16.71■□□□□ 0.27
CCDC130-202ENST00000540216 CNOT7Q9UIV1 285 aaKnown RBP16.71■□□□□ 0.27
CCDC130-202ENST00000540216 MYO3BQ8WXR4 1341 aa16.7■□□□□ 0.26
CCDC130-202ENST00000540216 LRRC24Q50LG9 513 aa16.7■□□□□ 0.26
CCDC130-202ENST00000540216 STRIP1Q5VSL9 837 aa16.7■□□□□ 0.26
CCDC130-202ENST00000540216 ITPRIPQ8IWB1 547 aa16.7■□□□□ 0.26
CCDC130-202ENST00000540216 MICALL2Q8IY33 904 aa16.7■□□□□ 0.26
CCDC130-202ENST00000540216 KLHDC4Q8TBB5 520 aa16.7■□□□□ 0.26
CCDC130-202ENST00000540216 CD209Q9NNX6 404 aa16.7■□□□□ 0.26
CCDC130-202ENST00000540216 CLEC11AQ9Y240 323 aa16.7■□□□□ 0.26
CCDC130-202ENST00000540216 ZBTB12Q9Y330 459 aaPredicted RBP16.7■□□□□ 0.26
CCDC130-202ENST00000540216 SNAP23O00161 211 aa16.69■□□□□ 0.26
CCDC130-202ENST00000540216 PDE8BO95263 885 aa16.69■□□□□ 0.26
CCDC130-202ENST00000540216 RLBP1P12271 317 aa16.69■□□□□ 0.26
CCDC130-202ENST00000540216 VGLL2Q8N8G2 317 aa16.69■□□□□ 0.26
CCDC130-202ENST00000540216 COPRSQ9NQ92 184 aa16.69■□□□□ 0.26
CCDC130-202ENST00000540216 IL1R1P14778 569 aa16.68■□□□□ 0.26
CCDC130-202ENST00000540216 MMP14P50281 582 aa16.68■□□□□ 0.26
CCDC130-202ENST00000540216 DACT2Q5SW24 774 aa16.68■□□□□ 0.26
CCDC130-202ENST00000540216 ZC3H15Q8WU90 426 aaKnown RBP16.68■□□□□ 0.26
CCDC130-202ENST00000540216 GMLQ99445 158 aa16.68■□□□□ 0.26
CCDC130-202ENST00000540216 ZNF646O15015 1829 aaPredicted RBP16.68■□□□□ 0.26
CCDC130-202ENST00000540216 SRGAP3O43295 1099 aa16.67■□□□□ 0.26
CCDC130-202ENST00000540216 PUM3Q15397 648 aaKnown RBP16.67■□□□□ 0.26
CCDC130-202ENST00000540216 TTLL5Q6EMB2 1281 aa16.67■□□□□ 0.26
CCDC130-202ENST00000540216 ZBTB7BO15156 539 aaPredicted RBP16.66■□□□□ 0.26
CCDC130-202ENST00000540216 USP17L8P0C7I0 530 aa16.66■□□□□ 0.26
CCDC130-202ENST00000540216 HIBADHP31937 336 aaKnown RBP16.66■□□□□ 0.26
CCDC130-202ENST00000540216 IL15P40933 162 aaPredicted RBP16.66■□□□□ 0.26
CCDC130-202ENST00000540216 ZNF280AP59817 542 aaPredicted RBP16.66■□□□□ 0.26
CCDC130-202ENST00000540216 ATG9AQ7Z3C6 839 aa16.66■□□□□ 0.26
CCDC130-202ENST00000540216 CNTROBQ8N137 903 aa16.66■□□□□ 0.26
CCDC130-202ENST00000540216 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.66■□□□□ 0.26
CCDC130-202ENST00000540216 SIL1Q9H173 461 aa16.66■□□□□ 0.26
CCDC130-202ENST00000540216 PGAP2Q9UHJ9 254 aa16.66■□□□□ 0.26
CCDC130-202ENST00000540216 PASKQ96RG2 1323 aa16.66■□□□□ 0.26
CCDC130-202ENST00000540216 SHTN1A0MZ66 631 aa16.65■□□□□ 0.26
CCDC130-202ENST00000540216 ITGBL1O95965 494 aaPredicted RBP16.65■□□□□ 0.26
CCDC130-202ENST00000540216 IFIT1P09914 478 aaKnown RBP16.65■□□□□ 0.26
CCDC130-202ENST00000540216 FKBP1AP62942 108 aaKnown RBP16.65■□□□□ 0.26
CCDC130-202ENST00000540216 GTF2IP78347 998 aa16.65■□□□□ 0.26
CCDC130-202ENST00000540216 CAVIN4Q5BKX8 364 aa16.65■□□□□ 0.26
CCDC130-202ENST00000540216 MAP1SQ66K74 1059 aaPredicted RBP16.65■□□□□ 0.26
CCDC130-202ENST00000540216 TRPM4Q8TD43 1214 aa16.65■□□□□ 0.26
CCDC130-202ENST00000540216 PANK1Q8TE04 598 aa16.65■□□□□ 0.26
CCDC130-202ENST00000540216 FBXW7Q969H0 707 aa16.65■□□□□ 0.26
CCDC130-202ENST00000540216 CEP126Q9P2H0 1117 aa16.65■□□□□ 0.26
CCDC130-202ENST00000540216 SASH1O94885 1247 aa16.64■□□□□ 0.25
CCDC130-202ENST00000540216 SLC5A1P13866 664 aa16.64■□□□□ 0.25
CCDC130-202ENST00000540216 FGFR2P21802 821 aa16.64■□□□□ 0.25
CCDC130-202ENST00000540216 KIF4BQ2VIQ3 1234 aa16.64■□□□□ 0.25
CCDC130-202ENST00000540216 SAMD7Q7Z3H4 446 aa16.64■□□□□ 0.25
CCDC130-202ENST00000540216 VPS37DQ86XT2 251 aa16.64■□□□□ 0.25
CCDC130-202ENST00000540216 OGFOD1Q8N543 542 aa16.64■□□□□ 0.25
CCDC130-202ENST00000540216 TDRD7Q8NHU6 1098 aaKnown RBP16.64■□□□□ 0.25
CCDC130-202ENST00000540216 LPIN2Q92539 896 aa16.64■□□□□ 0.25
CCDC130-202ENST00000540216 FAM84BQ96KN1 310 aaPredicted RBP16.64■□□□□ 0.25
CCDC130-202ENST00000540216 CHMP4BQ9H444 224 aaKnown RBP16.64■□□□□ 0.25
CCDC130-202ENST00000540216 PA2G4Q9UQ80 394 aaKnown RBP16.64■□□□□ 0.25
CCDC130-202ENST00000540216 GYG1P46976 350 aa16.63■□□□□ 0.25
CCDC130-202ENST00000540216 HIRAP54198 1017 aaPredicted RBP16.63■□□□□ 0.25
CCDC130-202ENST00000540216 PDE3AQ14432 1141 aa16.63■□□□□ 0.25
CCDC130-202ENST00000540216 MVPQ14764 893 aaKnown RBP16.63■□□□□ 0.25
CCDC130-202ENST00000540216 TBC1D10BQ4KMP7 808 aaPredicted RBP16.63■□□□□ 0.25
CCDC130-202ENST00000540216 FBXO33Q7Z6M2 555 aa16.63■□□□□ 0.25
CCDC130-202ENST00000540216 DDX19BQ9UMR2 479 aa16.63■□□□□ 0.25
CCDC130-202ENST00000540216 FAM205AQ6ZU69 1335 aa16.63■□□□□ 0.25
CCDC130-202ENST00000540216 ATP2B3Q16720 1220 aa16.62■□□□□ 0.25
CCDC130-202ENST00000540216 YTHDC1Q96MU7 727 aaKnown RBP16.62■□□□□ 0.25
CCDC130-202ENST00000540216 MYOZ2Q9NPC6 264 aa16.62■□□□□ 0.25
CCDC130-202ENST00000540216 CREBZFQ9NS37 354 aa16.62■□□□□ 0.25
CCDC130-202ENST00000540216 HDAC9Q9UKV0 1011 aa16.62■□□□□ 0.25
CCDC130-202ENST00000540216 PNMA6EA0A0J9YXQ4 647 aa16.61■□□□□ 0.25
CCDC130-202ENST00000540216 ATP8B2P98198 1209 aa16.61■□□□□ 0.25
CCDC130-202ENST00000540216 POLA2Q14181 598 aa16.61■□□□□ 0.25
CCDC130-202ENST00000540216 SSH3Q8TE77 659 aa16.61■□□□□ 0.25
CCDC130-202ENST00000540216 MXD3Q9BW11 206 aa16.61■□□□□ 0.25
CCDC130-202ENST00000540216 EGFRP00533 1210 aa16.6■□□□□ 0.25
CCDC130-202ENST00000540216 RBM26Q5T8P6 1007 aaKnown RBP16.6■□□□□ 0.25
CCDC130-202ENST00000540216 CDC37L1Q7L3B6 337 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms