RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 COL15A1P39059 1388 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 F6X3S4 739 aa10.16□□□□□ -0.78
DDB1-217ENST00000540166 SIRT2Q8IXJ6 389 aa10.16□□□□□ -0.78
DDB1-217ENST00000540166 ANKRD44Q8N8A2 993 aa10.16□□□□□ -0.78
DDB1-217ENST00000540166 UTP14AQ9BVJ6 771 aaKnown RBP10.16□□□□□ -0.78
DDB1-217ENST00000540166 BRD1O95696 1058 aa10.16□□□□□ -0.78
DDB1-217ENST00000540166 SLFN14P0C7P3 912 aa10.16□□□□□ -0.78
DDB1-217ENST00000540166 SYCP1Q15431 976 aa10.16□□□□□ -0.78
DDB1-217ENST00000540166 CAMK4Q16566 473 aa10.16□□□□□ -0.78
DDB1-217ENST00000540166 CCDC93Q567U6 631 aa10.16□□□□□ -0.78
DDB1-217ENST00000540166 CCDC30Q5VVM6 783 aa10.16□□□□□ -0.78
DDB1-217ENST00000540166 CCAR2Q8N163 923 aaKnown RBP10.16□□□□□ -0.78
DDB1-217ENST00000540166 FAM200AQ8TCP9 573 aa10.16□□□□□ -0.78
DDB1-217ENST00000540166 NFAT5O94916 1531 aa10.16□□□□□ -0.78
DDB1-217ENST00000540166 USP42Q9H9J4 1324 aaKnown RBP10.16□□□□□ -0.78
DDB1-217ENST00000540166 KIF2AO00139 706 aaPredicted RBP10.15□□□□□ -0.78
DDB1-217ENST00000540166 SLU7O95391 586 aaKnown RBP10.15□□□□□ -0.78
DDB1-217ENST00000540166 CYP2E1P05181 493 aaPredicted RBP10.15□□□□□ -0.78
DDB1-217ENST00000540166 TOMM22Q9NS69 142 aa10.15□□□□□ -0.78
DDB1-217ENST00000540166 ANKIB1Q9P2G1 1089 aa10.15□□□□□ -0.78
DDB1-217ENST00000540166 GNAI2P04899 355 aa10.15□□□□□ -0.78
DDB1-217ENST00000540166 ELF2Q15723 593 aa10.15□□□□□ -0.78
DDB1-217ENST00000540166 NIM1KQ8IY84 436 aa10.15□□□□□ -0.78
DDB1-217ENST00000540166 CCDC191Q8NCU4 936 aa10.15□□□□□ -0.78
DDB1-217ENST00000540166 ZBTB9Q96C00 473 aa10.15□□□□□ -0.78
DDB1-217ENST00000540166 MORC2Q9Y6X9 1032 aaPredicted RBP10.15□□□□□ -0.78
DDB1-217ENST00000540166 CCDC171Q6TFL3 1326 aa10.15□□□□□ -0.78
DDB1-217ENST00000540166 FAM193AP78312 1265 aa10.15□□□□□ -0.78
DDB1-217ENST00000540166 PARP10Q53GL7 1025 aa10.15□□□□□ -0.78
DDB1-217ENST00000540166 MASTLQ96GX5 879 aa10.15□□□□□ -0.78
DDB1-217ENST00000540166 ERO1AQ96HE7 468 aa10.15□□□□□ -0.78
DDB1-217ENST00000540166 HNRNPH2P55795 449 aaKnown RBP10.14□□□□□ -0.79
DDB1-217ENST00000540166 BRIP1Q9BX63 1249 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 LRRCC1Q9C099 1032 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 ANXA1P04083 346 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 LMNB1P20700 586 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 KRBA2Q6ZNG9 492 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 AIDAQ96BJ3 306 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 DBF4Q9UBU7 674 aaPredicted RBP10.14□□□□□ -0.79
DDB1-217ENST00000540166 LRRFIP2Q9Y608 721 aaKnown RBP10.14□□□□□ -0.79
DDB1-217ENST00000540166 HEG1Q9ULI3 1381 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 VEGFAP15692 232 aaPredicted RBP10.14□□□□□ -0.79
DDB1-217ENST00000540166 NAA30Q147X3 362 aaPredicted RBP10.14□□□□□ -0.79
DDB1-217ENST00000540166 CEP85Q6P2H3 762 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 COPS6Q7L5N1 327 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 CKAP2LQ8IYA6 745 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 ZNF215Q9UL58 517 aaPredicted RBP10.14□□□□□ -0.79
DDB1-217ENST00000540166 IQCA1LA6NCM1 817 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 CTIFO43310 598 aaKnown RBP10.14□□□□□ -0.79
DDB1-217ENST00000540166 KCNQ3O43525 872 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 MAP4K4O95819 1239 aaPredicted RBP10.14□□□□□ -0.79
DDB1-217ENST00000540166 NUTM1Q86Y26 1132 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 SUPT20HQ8NEM7 779 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 INTS4Q96HW7 963 aaKnown RBP10.14□□□□□ -0.79
DDB1-217ENST00000540166 EFCC1Q9HA90 598 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 IL1RAPL2Q9NP60 686 aa10.14□□□□□ -0.79
DDB1-217ENST00000540166 VIRMAQ69YN4 1812 aaKnown RBP10.13□□□□□ -0.79
DDB1-217ENST00000540166 NPR1P16066 1061 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 CCDC85AQ96PX6 553 aaPredicted RBP10.13□□□□□ -0.79
DDB1-217ENST00000540166 ZNF408Q9H9D4 720 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 C9orf78Q9NZ63 289 aaPredicted RBP10.13□□□□□ -0.79
DDB1-217ENST00000540166 ZDHHC9Q9Y397 364 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 BRWD3Q6RI45 1802 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 NEMFO60524 1076 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 KRT85P78386 507 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 LRMPQ12912 555 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 RTKN2Q8IZC4 609 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 XAGE3Q8WTP9 111 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 ABCC6O95255 1503 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 PPIP5K2O43314 1243 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 STX6O43752 255 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 PDE1AP54750 535 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 C1QTNF8P60827 252 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 VPS37DQ86XT2 251 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 MPHOSPH8Q99549 860 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 HYPKQ9NX55 129 aa10.13□□□□□ -0.79
DDB1-217ENST00000540166 GNAI3P08754 354 aa10.12□□□□□ -0.79
DDB1-217ENST00000540166 LMAN1P49257 510 aa10.12□□□□□ -0.79
DDB1-217ENST00000540166 CCT4P50991 539 aaKnown RBP10.12□□□□□ -0.79
DDB1-217ENST00000540166 TTLL12Q14166 644 aaPredicted RBP10.12□□□□□ -0.79
DDB1-217ENST00000540166 TBC1D9BQ66K14 1250 aa10.12□□□□□ -0.79
DDB1-217ENST00000540166 CLEC4GQ6UXB4 293 aa10.12□□□□□ -0.79
DDB1-217ENST00000540166 TEX2Q8IWB9 1127 aa10.12□□□□□ -0.79
DDB1-217ENST00000540166 LARP6Q9BRS8 491 aaKnown RBP10.12□□□□□ -0.79
DDB1-217ENST00000540166 RRAGCQ9HB90 399 aa10.12□□□□□ -0.79
DDB1-217ENST00000540166 ABCC4O15439 1325 aa10.12□□□□□ -0.79
DDB1-217ENST00000540166 CARMIL3Q8ND23 1372 aa10.12□□□□□ -0.79
DDB1-217ENST00000540166 SURF6O75683 361 aaKnown RBP10.12□□□□□ -0.79
DDB1-217ENST00000540166 ZSCAN22P10073 491 aaPredicted RBP10.12□□□□□ -0.79
DDB1-217ENST00000540166 SKILP12757 684 aa10.12□□□□□ -0.79
DDB1-217ENST00000540166 ANKRD13DQ6ZTN6 518 aa10.12□□□□□ -0.79
DDB1-217ENST00000540166 LUZP1Q86V48 1076 aa10.12□□□□□ -0.79
DDB1-217ENST00000540166 ZNF165P49910 485 aa10.12□□□□□ -0.79
DDB1-217ENST00000540166 SETQ01105 290 aaPredicted RBP10.12□□□□□ -0.79
DDB1-217ENST00000540166 CC2D2BQ6DHV5 1058 aa10.12□□□□□ -0.79
DDB1-217ENST00000540166 DPP8Q6V1X1 898 aaPredicted RBP10.12□□□□□ -0.79
DDB1-217ENST00000540166 NEK11Q8NG66 645 aa10.12□□□□□ -0.79
DDB1-217ENST00000540166 ZC3H12CQ9C0D7 883 aaKnown RBP10.12□□□□□ -0.79
DDB1-217ENST00000540166 ABT1Q9ULW3 272 aaKnown RBP10.12□□□□□ -0.79
DDB1-217ENST00000540166 ATP5J2-PTCD1G3V325 749 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms