RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 FTSJ3Q8IY81 847 aaKnown RBP22.89■■□□□ 1.25
SNRPA1-203ENST00000540017 YTHDC1Q96MU7 727 aaKnown RBP22.89■■□□□ 1.25
SNRPA1-203ENST00000540017 COA1Q9GZY4 146 aa22.89■■□□□ 1.25
SNRPA1-203ENST00000540017 MROH5Q6ZUA9 1318 aa22.88■■□□□ 1.25
SNRPA1-203ENST00000540017 PSME4Q14997 1843 aa22.88■■□□□ 1.25
SNRPA1-203ENST00000540017 PNMA8AQ86V59 439 aaPredicted RBP22.88■■□□□ 1.25
SNRPA1-203ENST00000540017 VGLL2Q8N8G2 317 aa22.88■■□□□ 1.25
SNRPA1-203ENST00000540017 PANK1Q8TE04 598 aa22.88■■□□□ 1.25
SNRPA1-203ENST00000540017 DPF2Q92785 391 aa22.88■■□□□ 1.25
SNRPA1-203ENST00000540017 CNOT7Q9UIV1 285 aaKnown RBP22.88■■□□□ 1.25
SNRPA1-203ENST00000540017 HDAC5Q9UQL6 1122 aa22.88■■□□□ 1.25
SNRPA1-203ENST00000540017 ATG9AQ7Z3C6 839 aa22.87■■□□□ 1.25
SNRPA1-203ENST00000540017 MICALL2Q8IY33 904 aa22.87■■□□□ 1.25
SNRPA1-203ENST00000540017 ADARB2Q9NS39 739 aaKnown RBP22.87■■□□□ 1.25
SNRPA1-203ENST00000540017 PA2G4Q9UQ80 394 aaKnown RBP22.87■■□□□ 1.25
SNRPA1-203ENST00000540017 ZNF646O15015 1829 aaPredicted RBP22.87■■□□□ 1.25
SNRPA1-203ENST00000540017 USP17L3A6NCW0 530 aa22.86■■□□□ 1.25
SNRPA1-203ENST00000540017 USP17L4A6NCW7 530 aa22.86■■□□□ 1.25
SNRPA1-203ENST00000540017 EYA2O00167 538 aa22.86■■□□□ 1.25
SNRPA1-203ENST00000540017 UBE4AQ14139 1066 aa22.86■■□□□ 1.25
SNRPA1-203ENST00000540017 METTL24Q5JXM2 366 aa22.86■■□□□ 1.25
SNRPA1-203ENST00000540017 RSBN1LQ6PCB5 846 aaPredicted RBP22.86■■□□□ 1.25
SNRPA1-203ENST00000540017 USP17L1Q7RTZ2 530 aa22.86■■□□□ 1.25
SNRPA1-203ENST00000540017 ITPRIPQ8IWB1 547 aa22.86■■□□□ 1.25
SNRPA1-203ENST00000540017 CD209Q9NNX6 404 aa22.86■■□□□ 1.25
SNRPA1-203ENST00000540017 CLEC11AQ9Y240 323 aa22.86■■□□□ 1.25
SNRPA1-203ENST00000540017 GNAI2P04899 355 aa22.85■■□□□ 1.25
SNRPA1-203ENST00000540017 RPS12P25398 132 aaKnown RBP22.85■■□□□ 1.25
SNRPA1-203ENST00000540017 HIRAP54198 1017 aaPredicted RBP22.85■■□□□ 1.25
SNRPA1-203ENST00000540017 MTX1Q13505 466 aa22.85■■□□□ 1.25
SNRPA1-203ENST00000540017 USP50Q70EL3 339 aaPredicted RBP22.85■■□□□ 1.25
SNRPA1-203ENST00000540017 TRPM4Q8TD43 1214 aa22.85■■□□□ 1.25
SNRPA1-203ENST00000540017 GMLQ99445 158 aa22.85■■□□□ 1.25
SNRPA1-203ENST00000540017 MXD3Q9BW11 206 aa22.85■■□□□ 1.25
SNRPA1-203ENST00000540017 SIL1Q9H173 461 aa22.85■■□□□ 1.25
SNRPA1-203ENST00000540017 CEP350Q5VT06 3117 aa22.85■■□□□ 1.25
SNRPA1-203ENST00000540017 ZBTB7BO15156 539 aaPredicted RBP22.84■■□□□ 1.25
SNRPA1-203ENST00000540017 EGFRP00533 1210 aa22.84■■□□□ 1.25
SNRPA1-203ENST00000540017 DACT2Q5SW24 774 aa22.84■■□□□ 1.25
SNRPA1-203ENST00000540017 MAP1SQ66K74 1059 aaPredicted RBP22.84■■□□□ 1.25
SNRPA1-203ENST00000540017 PDE8BO95263 885 aa22.83■■□□□ 1.25
SNRPA1-203ENST00000540017 SAMD7Q7Z3H4 446 aa22.83■■□□□ 1.25
SNRPA1-203ENST00000540017 ZNF609O15014 1411 aa22.82■■□□□ 1.24
SNRPA1-203ENST00000540017 H7C1D1 291 aa22.82■■□□□ 1.24
SNRPA1-203ENST00000540017 SRGAP3O43295 1099 aa22.82■■□□□ 1.24
SNRPA1-203ENST00000540017 ITGBL1O95965 494 aaPredicted RBP22.82■■□□□ 1.24
SNRPA1-203ENST00000540017 GYG1P46976 350 aa22.82■■□□□ 1.24
SNRPA1-203ENST00000540017 STRIP1Q5VSL9 837 aa22.82■■□□□ 1.24
SNRPA1-203ENST00000540017 ZNF804AQ7Z570 1209 aa22.82■■□□□ 1.24
SNRPA1-203ENST00000540017 AGBL3Q8NEM8 1001 aa22.82■■□□□ 1.24
SNRPA1-203ENST00000540017 FBXW7Q969H0 707 aa22.82■■□□□ 1.24
SNRPA1-203ENST00000540017 FAM84BQ96KN1 310 aaPredicted RBP22.82■■□□□ 1.24
SNRPA1-203ENST00000540017 C1orf115Q9H7X2 142 aa22.82■■□□□ 1.24
SNRPA1-203ENST00000540017 COPRSQ9NQ92 184 aa22.82■■□□□ 1.24
SNRPA1-203ENST00000540017 PNMA6EA0A0J9YXQ4 647 aa22.81■■□□□ 1.24
SNRPA1-203ENST00000540017 CIAO1O76071 339 aa22.81■■□□□ 1.24
SNRPA1-203ENST00000540017 IL1R1P14778 569 aa22.81■■□□□ 1.24
SNRPA1-203ENST00000540017 FGFR2P21802 821 aa22.81■■□□□ 1.24
SNRPA1-203ENST00000540017 GTF2IP78347 998 aa22.81■■□□□ 1.24
SNRPA1-203ENST00000540017 HTRA3P83110 453 aa22.81■■□□□ 1.24
SNRPA1-203ENST00000540017 TTLL5Q6EMB2 1281 aa22.81■■□□□ 1.24
SNRPA1-203ENST00000540017 TBC1D10BQ4KMP7 808 aaPredicted RBP22.8■■□□□ 1.24
SNRPA1-203ENST00000540017 CNTROBQ8N137 903 aa22.8■■□□□ 1.24
SNRPA1-203ENST00000540017 FBXO3Q9UK99 471 aa22.8■■□□□ 1.24
SNRPA1-203ENST00000540017 PASKQ96RG2 1323 aa22.8■■□□□ 1.24
SNRPA1-203ENST00000540017 APLP1P51693 650 aa22.79■■□□□ 1.24
SNRPA1-203ENST00000540017 RBM26Q5T8P6 1007 aaKnown RBP22.79■■□□□ 1.24
SNRPA1-203ENST00000540017 HIBADHP31937 336 aaKnown RBP22.78■■□□□ 1.24
SNRPA1-203ENST00000540017 ZNF280AP59817 542 aaPredicted RBP22.78■■□□□ 1.24
SNRPA1-203ENST00000540017 FMR1Q06787 632 aaKnown RBP eCLIP22.78■■□□□ 1.24
SNRPA1-203ENST00000540017 C20orf194Q5TEA3 1177 aa22.78■■□□□ 1.24
SNRPA1-203ENST00000540017 FBXO33Q7Z6M2 555 aa22.78■■□□□ 1.24
SNRPA1-203ENST00000540017 TDRD7Q8NHU6 1098 aaKnown RBP22.78■■□□□ 1.24
SNRPA1-203ENST00000540017 PGAP2Q9UHJ9 254 aa22.78■■□□□ 1.24
SNRPA1-203ENST00000540017 JAG2Q9Y219 1238 aa22.78■■□□□ 1.24
SNRPA1-203ENST00000540017 USP17L8P0C7I0 530 aa22.77■■□□□ 1.24
SNRPA1-203ENST00000540017 PUM3Q15397 648 aaKnown RBP22.77■■□□□ 1.24
SNRPA1-203ENST00000540017 CERS5Q8N5B7 392 aa22.77■■□□□ 1.24
SNRPA1-203ENST00000540017 COG6Q9Y2V7 657 aa22.77■■□□□ 1.24
SNRPA1-203ENST00000540017 MS4A1P11836 297 aa22.76■■□□□ 1.23
SNRPA1-203ENST00000540017 IL15P40933 162 aaPredicted RBP22.76■■□□□ 1.23
SNRPA1-203ENST00000540017 KIF4BQ2VIQ3 1234 aa22.76■■□□□ 1.23
SNRPA1-203ENST00000540017 CEP126Q9P2H0 1117 aa22.76■■□□□ 1.23
SNRPA1-203ENST00000540017 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.76■■□□□ 1.23
SNRPA1-203ENST00000540017 BCAMP50895 628 aa22.75■■□□□ 1.23
SNRPA1-203ENST00000540017 ATP8B2P98198 1209 aa22.75■■□□□ 1.23
SNRPA1-203ENST00000540017 POLA2Q14181 598 aa22.75■■□□□ 1.23
SNRPA1-203ENST00000540017 MVPQ14764 893 aaKnown RBP22.75■■□□□ 1.23
SNRPA1-203ENST00000540017 ZC3H15Q8WU90 426 aaKnown RBP22.75■■□□□ 1.23
SNRPA1-203ENST00000540017 IQSEC3Q9UPP2 1182 aaPredicted RBP22.75■■□□□ 1.23
SNRPA1-203ENST00000540017 ASTN2O75129 1339 aaPredicted RBP22.75■■□□□ 1.23
SNRPA1-203ENST00000540017 MYO3BQ8WXR4 1341 aa22.75■■□□□ 1.23
SNRPA1-203ENST00000540017 TRAF5O00463 557 aa22.74■■□□□ 1.23
SNRPA1-203ENST00000540017 SASH1O94885 1247 aa22.74■■□□□ 1.23
SNRPA1-203ENST00000540017 KIAA0825Q8IV33 1275 aa22.74■■□□□ 1.23
SNRPA1-203ENST00000540017 SSH3Q8TE77 659 aa22.74■■□□□ 1.23
SNRPA1-203ENST00000540017 LPIN2Q92539 896 aa22.74■■□□□ 1.23
SNRPA1-203ENST00000540017 IFIT1P09914 478 aaKnown RBP22.73■■□□□ 1.23
SNRPA1-203ENST00000540017 ATP2B3Q16720 1220 aa22.73■■□□□ 1.23
SNRPA1-203ENST00000540017 DNAJC5GQ8N7S2 189 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms