RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 G3V3G9 751 aa14.24□□□□□ -0.13
VTN-202ENST00000539746 ARID4AP29374 1257 aaPredicted RBP14.24□□□□□ -0.13
VTN-202ENST00000539746 MAP3K12Q12852 859 aa14.24□□□□□ -0.13
VTN-202ENST00000539746 WASHC4Q2M389 1173 aa14.24□□□□□ -0.13
VTN-202ENST00000539746 DCAF8Q5TAQ9 597 aa14.24□□□□□ -0.13
VTN-202ENST00000539746 SLF2Q8IX21 1173 aa14.24□□□□□ -0.13
VTN-202ENST00000539746 RTKN2Q8IZC4 609 aa14.24□□□□□ -0.13
VTN-202ENST00000539746 DBNDD2Q9BQY9 259 aa14.24□□□□□ -0.13
VTN-202ENST00000539746 PUS3Q9BZE2 481 aaKnown RBP14.24□□□□□ -0.13
VTN-202ENST00000539746 CD2APQ9Y5K6 639 aa14.24□□□□□ -0.13
VTN-202ENST00000539746 DUOX1Q9NRD9 1551 aa14.23□□□□□ -0.13
VTN-202ENST00000539746 TIMM10P62072 90 aa14.23□□□□□ -0.13
VTN-202ENST00000539746 MSL1Q68DK7 614 aa14.23□□□□□ -0.13
VTN-202ENST00000539746 KBTBD3Q8NAB2 608 aa14.23□□□□□ -0.13
VTN-202ENST00000539746 TBC1D22AQ8WUA7 517 aa14.23□□□□□ -0.13
VTN-202ENST00000539746 CELF1Q92879 486 aaKnown RBP14.23□□□□□ -0.13
VTN-202ENST00000539746 ZNF622Q969S3 477 aaKnown RBP eCLIP14.23□□□□□ -0.13
VTN-202ENST00000539746 TSHZ2Q9NRE2 1034 aa14.23□□□□□ -0.13
VTN-202ENST00000539746 DAXXQ9UER7 740 aaPredicted RBP14.23□□□□□ -0.13
VTN-202ENST00000539746 C10orf71Q711Q0 1435 aa14.23□□□□□ -0.13
VTN-202ENST00000539746 TUBGCP6Q96RT7 1819 aa14.22□□□□□ -0.13
VTN-202ENST00000539746 GSPT1P15170 499 aaKnown RBP14.22□□□□□ -0.13
VTN-202ENST00000539746 HIBADHP31937 336 aaKnown RBP14.22□□□□□ -0.13
VTN-202ENST00000539746 C8orf34Q49A92 452 aa14.22□□□□□ -0.13
VTN-202ENST00000539746 RNF20Q5VTR2 975 aa14.22□□□□□ -0.13
VTN-202ENST00000539746 CCDC102BQ68D86 513 aa14.22□□□□□ -0.13
VTN-202ENST00000539746 DPP8Q6V1X1 898 aaPredicted RBP14.22□□□□□ -0.13
VTN-202ENST00000539746 TBC1D9Q6ZT07 1266 aa14.22□□□□□ -0.13
VTN-202ENST00000539746 SMIM5Q71RC9 77 aa14.22□□□□□ -0.13
VTN-202ENST00000539746 TTLL6Q8N841 843 aa14.22□□□□□ -0.13
VTN-202ENST00000539746 WDR66Q8TBY9 1149 aa14.22□□□□□ -0.13
VTN-202ENST00000539746 DNAJC2Q99543 621 aaKnown RBP14.22□□□□□ -0.13
VTN-202ENST00000539746 BOLA2Q9H3K6 86 aa14.22□□□□□ -0.13
VTN-202ENST00000539746 MED23Q9ULK4 1368 aa14.22□□□□□ -0.13
VTN-202ENST00000539746 GSTO1P78417 241 aa14.21□□□□□ -0.13
VTN-202ENST00000539746 MPNDQ8N594 471 aa14.21□□□□□ -0.13
VTN-202ENST00000539746 SPATA5Q8NB90 893 aa14.21□□□□□ -0.13
VTN-202ENST00000539746 ZC3H12CQ9C0D7 883 aaKnown RBP14.21□□□□□ -0.13
VTN-202ENST00000539746 SPON1Q9HCB6 807 aa14.21□□□□□ -0.13
VTN-202ENST00000539746 HELLSQ9NRZ9 838 aa14.21□□□□□ -0.13
VTN-202ENST00000539746 NSFL1CQ9UNZ2 370 aaKnown RBP14.21□□□□□ -0.13
VTN-202ENST00000539746 UFL1O94874 794 aa14.2□□□□□ -0.14
VTN-202ENST00000539746 MMP14P50281 582 aa14.2□□□□□ -0.14
VTN-202ENST00000539746 FKBP4Q02790 459 aaKnown RBP eCLIP14.2□□□□□ -0.14
VTN-202ENST00000539746 OTUD7AQ8TE49 926 aaPredicted RBP14.2□□□□□ -0.14
VTN-202ENST00000539746 PIM2Q9P1W9 311 aa14.2□□□□□ -0.14
VTN-202ENST00000539746 SUGT1Q9Y2Z0 365 aa14.2□□□□□ -0.14
VTN-202ENST00000539746 C6orf229H3BNL8 230 aa14.19□□□□□ -0.14
VTN-202ENST00000539746 GNAT2P19087 354 aa14.19□□□□□ -0.14
VTN-202ENST00000539746 CHMLP26374 656 aa14.19□□□□□ -0.14
VTN-202ENST00000539746 BECN1Q14457 450 aa14.19□□□□□ -0.14
VTN-202ENST00000539746 R3HDM1Q15032 1099 aaKnown RBP14.19□□□□□ -0.14
VTN-202ENST00000539746 CCDC93Q567U6 631 aa14.19□□□□□ -0.14
VTN-202ENST00000539746 NOL10Q9BSC4 688 aaKnown RBP14.19□□□□□ -0.14
VTN-202ENST00000539746 COA1Q9GZY4 146 aa14.19□□□□□ -0.14
VTN-202ENST00000539746 CTNNA3Q9UI47 895 aa14.19□□□□□ -0.14
VTN-202ENST00000539746 ARAP2Q8WZ64 1704 aa14.18□□□□□ -0.14
VTN-202ENST00000539746 MAST3O60307 1309 aa14.18□□□□□ -0.14
VTN-202ENST00000539746 GOLIM4O00461 696 aa14.18□□□□□ -0.14
VTN-202ENST00000539746 TAF5LO75529 589 aa14.18□□□□□ -0.14
VTN-202ENST00000539746 ZKSCAN1P17029 563 aaPredicted RBP14.18□□□□□ -0.14
VTN-202ENST00000539746 NT5C2P49902 561 aa14.18□□□□□ -0.14
VTN-202ENST00000539746 ANAPC15P60006 121 aa14.18□□□□□ -0.14
VTN-202ENST00000539746 C3orf67Q6ZVT6 689 aa14.18□□□□□ -0.14
VTN-202ENST00000539746 ESYT1Q9BSJ8 1104 aa14.18□□□□□ -0.14
VTN-202ENST00000539746 TLR7Q9NYK1 1049 aaKnown RBP14.18□□□□□ -0.14
VTN-202ENST00000539746 LRP2BPQ9P2M1 347 aa14.18□□□□□ -0.14
VTN-202ENST00000539746 RNF113AO15541 343 aaKnown RBP14.17□□□□□ -0.14
VTN-202ENST00000539746 LDHCP07864 332 aa14.17□□□□□ -0.14
VTN-202ENST00000539746 UBE3CQ15386 1083 aa14.17□□□□□ -0.14
VTN-202ENST00000539746 MCMDC2Q4G0Z9 681 aa14.17□□□□□ -0.14
VTN-202ENST00000539746 PRPF40BQ6NWY9 871 aaKnown RBP14.17□□□□□ -0.14
VTN-202ENST00000539746 FBXO33Q7Z6M2 555 aa14.17□□□□□ -0.14
VTN-202ENST00000539746 HELBQ8NG08 1087 aaPredicted RBP14.17□□□□□ -0.14
VTN-202ENST00000539746 C22orf23Q9BZE7 217 aa14.17□□□□□ -0.14
VTN-202ENST00000539746 RPAP1Q9BWH6 1393 aaPredicted RBP14.17□□□□□ -0.14
VTN-202ENST00000539746 SALL1Q9NSC2 1324 aa14.16□□□□□ -0.14
VTN-202ENST00000539746 KRT32Q14532 448 aa14.16□□□□□ -0.14
VTN-202ENST00000539746 DALRD3Q5D0E6 543 aaKnown RBP14.16□□□□□ -0.14
VTN-202ENST00000539746 PODNQ7Z5L7 613 aa14.16□□□□□ -0.14
VTN-202ENST00000539746 NACAP1Q9BZK3 213 aa14.16□□□□□ -0.14
VTN-202ENST00000539746 ANO2Q9NQ90 1003 aa14.16□□□□□ -0.14
VTN-202ENST00000539746 HMG20BQ9P0W2 317 aa14.16□□□□□ -0.14
VTN-202ENST00000539746 TNRC6CQ9HCJ0 1690 aaKnown RBP14.16□□□□□ -0.14
VTN-202ENST00000539746 SGSM2O43147 1006 aa14.15□□□□□ -0.14
VTN-202ENST00000539746 ZBTB7AO95365 584 aa14.15□□□□□ -0.14
VTN-202ENST00000539746 MAP4K4O95819 1239 aaPredicted RBP14.15□□□□□ -0.14
VTN-202ENST00000539746 PLCG2P16885 1265 aa14.15□□□□□ -0.14
VTN-202ENST00000539746 ERICH6Q7L0X2 663 aa14.15□□□□□ -0.14
VTN-202ENST00000539746 CCDC24Q8N4L8 307 aa14.15□□□□□ -0.14
VTN-202ENST00000539746 TBC1D16Q8TBP0 767 aa14.15□□□□□ -0.14
VTN-202ENST00000539746 APPBP2Q92624 585 aa14.15□□□□□ -0.14
VTN-202ENST00000539746 PSMD1Q99460 953 aa14.15□□□□□ -0.14
VTN-202ENST00000539746 RTFDC1Q9BY42 306 aaPredicted RBP14.15□□□□□ -0.14
VTN-202ENST00000539746 SNRKQ9NRH2 765 aa14.15□□□□□ -0.14
VTN-202ENST00000539746 IDH1O75874 414 aaKnown RBP14.14□□□□□ -0.15
VTN-202ENST00000539746 BAG3O95817 575 aa14.14□□□□□ -0.15
VTN-202ENST00000539746 IL1R1P14778 569 aa14.14□□□□□ -0.15
VTN-202ENST00000539746 ADORA1P30542 326 aa14.14□□□□□ -0.15
VTN-202ENST00000539746 PHKA1P46020 1223 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms