RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 PRPF38BQ5VTL8 546 aaKnown RBP11.28□□□□□ -0.6
RTN4IP1-204ENST00000539449 SLC51AQ86UW1 340 aa11.28□□□□□ -0.6
RTN4IP1-204ENST00000539449 AACSQ86V21 672 aa11.28□□□□□ -0.6
RTN4IP1-204ENST00000539449 STAP2Q9UGK3 403 aa11.28□□□□□ -0.6
RTN4IP1-204ENST00000539449 RTL9Q8NET4 1388 aa11.28□□□□□ -0.6
RTN4IP1-204ENST00000539449 THSD7BQ9C0I4 1608 aa11.27□□□□□ -0.6
RTN4IP1-204ENST00000539449 ITGBL1O95965 494 aaPredicted RBP11.27□□□□□ -0.61
RTN4IP1-204ENST00000539449 MX1P20591 662 aa11.27□□□□□ -0.61
RTN4IP1-204ENST00000539449 IL15P40933 162 aaPredicted RBP11.27□□□□□ -0.61
RTN4IP1-204ENST00000539449 CCDC152Q4G0S7 254 aa11.27□□□□□ -0.61
RTN4IP1-204ENST00000539449 TNNI3KQ59H18 835 aa11.27□□□□□ -0.61
RTN4IP1-204ENST00000539449 TAF7LQ5H9L4 462 aa11.27□□□□□ -0.61
RTN4IP1-204ENST00000539449 LDHDQ86WU2 507 aa11.27□□□□□ -0.61
RTN4IP1-204ENST00000539449 CNBD1Q8NA66 436 aa11.27□□□□□ -0.61
RTN4IP1-204ENST00000539449 CELF1Q92879 486 aaKnown RBP11.27□□□□□ -0.61
RTN4IP1-204ENST00000539449 BACH2Q9BYV9 841 aa11.27□□□□□ -0.61
RTN4IP1-204ENST00000539449 OSBPL3Q9H4L5 887 aa11.27□□□□□ -0.61
RTN4IP1-204ENST00000539449 FPGT-TNNI3KV9GXZ4 949 aa11.27□□□□□ -0.61
RTN4IP1-204ENST00000539449 AK9Q5TCS8 1911 aa11.27□□□□□ -0.61
RTN4IP1-204ENST00000539449 CASP8AP2Q9UKL3 1982 aa11.27□□□□□ -0.61
RTN4IP1-204ENST00000539449 TIMM10P62072 90 aa11.26□□□□□ -0.61
RTN4IP1-204ENST00000539449 LDHAL6AQ6ZMR3 332 aa11.26□□□□□ -0.61
RTN4IP1-204ENST00000539449 CLASRPQ8N2M8 674 aaKnown RBP11.26□□□□□ -0.61
RTN4IP1-204ENST00000539449 HELBQ8NG08 1087 aaPredicted RBP11.26□□□□□ -0.61
RTN4IP1-204ENST00000539449 PI4K2BQ8TCG2 481 aa11.26□□□□□ -0.61
RTN4IP1-204ENST00000539449 NLRP3Q96P20 1036 aa11.26□□□□□ -0.61
RTN4IP1-204ENST00000539449 DBNDD2Q9BQY9 259 aa11.26□□□□□ -0.61
RTN4IP1-204ENST00000539449 SCN4AP35499 1836 aa11.25□□□□□ -0.61
RTN4IP1-204ENST00000539449 WTIPA6NIX2 430 aaPredicted RBP11.25□□□□□ -0.61
RTN4IP1-204ENST00000539449 SNAP23O00161 211 aa11.25□□□□□ -0.61
RTN4IP1-204ENST00000539449 SEC24BO95487 1268 aa11.25□□□□□ -0.61
RTN4IP1-204ENST00000539449 ADORA1P30542 326 aa11.25□□□□□ -0.61
RTN4IP1-204ENST00000539449 BMP2KLQ5H9B9 411 aa11.25□□□□□ -0.61
RTN4IP1-204ENST00000539449 VGLL2Q8N8G2 317 aa11.25□□□□□ -0.61
RTN4IP1-204ENST00000539449 BEGAINQ9BUH8 593 aa11.25□□□□□ -0.61
RTN4IP1-204ENST00000539449 CNNM1Q9NRU3 951 aa11.25□□□□□ -0.61
RTN4IP1-204ENST00000539449 CEP126Q9P2H0 1117 aa11.25□□□□□ -0.61
RTN4IP1-204ENST00000539449 DBNLQ9UJU6 430 aaKnown RBP11.25□□□□□ -0.61
RTN4IP1-204ENST00000539449 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
RTN4IP1-204ENST00000539449 COL11A2P13942 1736 aaPredicted RBP11.25□□□□□ -0.61
RTN4IP1-204ENST00000539449 ZNF609O15014 1411 aa11.25□□□□□ -0.61
RTN4IP1-204ENST00000539449 LTBP1Q14766 1721 aa11.24□□□□□ -0.61
RTN4IP1-204ENST00000539449 CACNA1SQ13698 1873 aa11.24□□□□□ -0.61
RTN4IP1-204ENST00000539449 NPHP1O15259 732 aa11.24□□□□□ -0.61
RTN4IP1-204ENST00000539449 DDNO94850 711 aaPredicted RBP11.24□□□□□ -0.61
RTN4IP1-204ENST00000539449 MAP4K4O95819 1239 aaPredicted RBP11.24□□□□□ -0.61
RTN4IP1-204ENST00000539449 IFIT2P09913 472 aaKnown RBP11.24□□□□□ -0.61
RTN4IP1-204ENST00000539449 HSP90B1P14625 803 aaKnown RBP11.24□□□□□ -0.61
RTN4IP1-204ENST00000539449 SDSP20132 328 aa11.24□□□□□ -0.61
RTN4IP1-204ENST00000539449 METTL24Q5JXM2 366 aa11.24□□□□□ -0.61
RTN4IP1-204ENST00000539449 GPR108Q9NPR9 543 aa11.24□□□□□ -0.61
RTN4IP1-204ENST00000539449 TSKSQ9UJT2 592 aa11.24□□□□□ -0.61
RTN4IP1-204ENST00000539449 ARAP2Q8WZ64 1704 aa11.23□□□□□ -0.61
RTN4IP1-204ENST00000539449 FER1L6Q2WGJ9 1857 aa11.23□□□□□ -0.61
RTN4IP1-204ENST00000539449 A0A1B0GUL7 405 aa11.23□□□□□ -0.61
RTN4IP1-204ENST00000539449 TAF5LO75529 589 aa11.23□□□□□ -0.61
RTN4IP1-204ENST00000539449 IGHMBP2P38935 993 aaKnown RBP11.23□□□□□ -0.61
RTN4IP1-204ENST00000539449 ST5P78524 1137 aa11.23□□□□□ -0.61
RTN4IP1-204ENST00000539449 TTLL6Q8N841 843 aa11.23□□□□□ -0.61
RTN4IP1-204ENST00000539449 NEUROD6Q96NK8 337 aa11.23□□□□□ -0.61
RTN4IP1-204ENST00000539449 ECHDC1Q9NTX5 307 aa11.23□□□□□ -0.61
RTN4IP1-204ENST00000539449 AOX1Q06278 1338 aa11.23□□□□□ -0.61
RTN4IP1-204ENST00000539449 KLRG2A4D1S0 409 aaPredicted RBP11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 IQCA1LA6NCM1 817 aa11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 FGFR2P21802 821 aa11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 RPS8P62241 208 aaKnown RBP11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 CHRNDQ07001 517 aa11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 DGKZQ13574 1117 aa11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 CRY2Q49AN0 593 aa11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 TTC41PQ6P2S7 1318 aa11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 ANKRD18AQ8IVF6 992 aa11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 CDC5LQ99459 802 aaKnown RBP11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 MPHOSPH8Q99549 860 aa11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 TAF1DQ9H5J8 278 aaPredicted RBP11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 AKAP11Q9UKA4 1901 aa11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 ABT1Q9ULW3 272 aaKnown RBP11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 MYO5AQ9Y4I1 1855 aaKnown RBP11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 NDUFB9Q9Y6M9 179 aa11.22□□□□□ -0.61
RTN4IP1-204ENST00000539449 ADAMTSL1Q8N6G6 1762 aa11.21□□□□□ -0.61
RTN4IP1-204ENST00000539449 PDE8BO95263 885 aa11.21□□□□□ -0.61
RTN4IP1-204ENST00000539449 ATP2B3Q16720 1220 aa11.21□□□□□ -0.61
RTN4IP1-204ENST00000539449 DDX46Q7L014 1031 aaKnown RBP11.21□□□□□ -0.61
RTN4IP1-204ENST00000539449 EDC3Q96F86 508 aaKnown RBP11.21□□□□□ -0.61
RTN4IP1-204ENST00000539449 XAGE2Q96GT9 111 aa11.21□□□□□ -0.61
RTN4IP1-204ENST00000539449 CAPNS2Q96L46 248 aa11.21□□□□□ -0.61
RTN4IP1-204ENST00000539449 BOLA2Q9H3K6 86 aa11.21□□□□□ -0.61
RTN4IP1-204ENST00000539449 FOXD4L1Q9NU39 408 aa11.21□□□□□ -0.61
RTN4IP1-204ENST00000539449 BSDC1Q9NW68 430 aaPredicted RBP11.21□□□□□ -0.61
RTN4IP1-204ENST00000539449 MINPP1Q9UNW1 487 aa11.21□□□□□ -0.61
RTN4IP1-204ENST00000539449 MROH5Q6ZUA9 1318 aa11.2□□□□□ -0.62
RTN4IP1-204ENST00000539449 SOX10P56693 466 aa11.2□□□□□ -0.62
RTN4IP1-204ENST00000539449 GRAPQ13588 217 aa11.2□□□□□ -0.62
RTN4IP1-204ENST00000539449 EAPPQ56P03 285 aaPredicted RBP11.2□□□□□ -0.62
RTN4IP1-204ENST00000539449 TBC1D9Q6ZT07 1266 aa11.2□□□□□ -0.62
RTN4IP1-204ENST00000539449 GRAPLQ8TC17 118 aaPredicted RBP11.2□□□□□ -0.62
RTN4IP1-204ENST00000539449 BRIP1Q9BX63 1249 aa11.2□□□□□ -0.62
RTN4IP1-204ENST00000539449 CLEC11AQ9Y240 323 aa11.2□□□□□ -0.62
RTN4IP1-204ENST00000539449 TRIM6-TRIM34B2RNG4 842 aa11.19□□□□□ -0.62
RTN4IP1-204ENST00000539449 GLRX3O76003 335 aaKnown RBP11.19□□□□□ -0.62
RTN4IP1-204ENST00000539449 ATP5JP18859 108 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms