RNA–Protein interactions for RNA: ENST00000539426.5

DDB1-214, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-214ENST00000539426 USP17L8P0C7I0 530 aa13.95□□□□□ -0.18
DDB1-214ENST00000539426 CCT4P50991 539 aaKnown RBP13.95□□□□□ -0.18
DDB1-214ENST00000539426 ZNF157P51786 506 aaPredicted RBP13.95□□□□□ -0.18
DDB1-214ENST00000539426 CASP7P55210 303 aa13.95□□□□□ -0.18
DDB1-214ENST00000539426 KIF23Q02241 960 aaPredicted RBP13.95□□□□□ -0.18
DDB1-214ENST00000539426 FLIIQ13045 1269 aa13.95□□□□□ -0.18
DDB1-214ENST00000539426 FAM161AQ3B820 660 aa13.95□□□□□ -0.18
DDB1-214ENST00000539426 TXNRD3Q86VQ6 643 aa13.95□□□□□ -0.18
DDB1-214ENST00000539426 MYOZ2Q9NPC6 264 aa13.95□□□□□ -0.18
DDB1-214ENST00000539426 A0A1B0GUL6 1792 aa13.95□□□□□ -0.18
DDB1-214ENST00000539426 PDE4DIPQ5VU43 2346 aa13.95□□□□□ -0.18
DDB1-214ENST00000539426 IL16Q14005 1332 aa13.94□□□□□ -0.18
DDB1-214ENST00000539426 FANCIQ9NVI1 1328 aa13.94□□□□□ -0.18
DDB1-214ENST00000539426 SLC10A3P09131 477 aa13.94□□□□□ -0.18
DDB1-214ENST00000539426 KLRK1P26718 216 aa13.94□□□□□ -0.18
DDB1-214ENST00000539426 GCKRQ14397 625 aa13.94□□□□□ -0.18
DDB1-214ENST00000539426 DACT2Q5SW24 774 aa13.94□□□□□ -0.18
DDB1-214ENST00000539426 CCDC102AQ96A19 550 aa13.94□□□□□ -0.18
DDB1-214ENST00000539426 PLA2G12BQ9BX93 195 aa13.94□□□□□ -0.18
DDB1-214ENST00000539426 PITPNM2Q9BZ72 1349 aa13.93□□□□□ -0.18
DDB1-214ENST00000539426 ITGA6P23229 1130 aa13.93□□□□□ -0.18
DDB1-214ENST00000539426 NBPF9Q3BBW0 867 aa13.93□□□□□ -0.18
DDB1-214ENST00000539426 RASAL3Q86YV0 1011 aa13.93□□□□□ -0.18
DDB1-214ENST00000539426 DNAAF4Q8WXU2 420 aa13.93□□□□□ -0.18
DDB1-214ENST00000539426 IGHMBP2P38935 993 aaKnown RBP13.92□□□□□ -0.18
DDB1-214ENST00000539426 FKBP5Q13451 457 aaPredicted RBP13.92□□□□□ -0.18
DDB1-214ENST00000539426 DGKZQ13574 1117 aa13.92□□□□□ -0.18
DDB1-214ENST00000539426 PRAMEF18Q5VWM3 479 aa13.92□□□□□ -0.18
DDB1-214ENST00000539426 MOB2Q70IA6 237 aa13.92□□□□□ -0.18
DDB1-214ENST00000539426 FBXW7Q969H0 707 aa13.92□□□□□ -0.18
DDB1-214ENST00000539426 CSRNP1Q96S65 589 aa13.92□□□□□ -0.18
DDB1-214ENST00000539426 WNT10BO00744 389 aa13.91□□□□□ -0.18
DDB1-214ENST00000539426 VAMP4O75379 141 aa13.91□□□□□ -0.18
DDB1-214ENST00000539426 TRPA1O75762 1119 aa13.91□□□□□ -0.18
DDB1-214ENST00000539426 CSF1RP07333 972 aa13.91□□□□□ -0.18
DDB1-214ENST00000539426 COA1Q9GZY4 146 aa13.91□□□□□ -0.18
DDB1-214ENST00000539426 MRS2Q9HD23 443 aa13.91□□□□□ -0.18
DDB1-214ENST00000539426 RNF186Q9NXI6 227 aa13.91□□□□□ -0.18
DDB1-214ENST00000539426 SAGE1Q9NXZ1 904 aa13.91□□□□□ -0.18
DDB1-214ENST00000539426 LEMD3Q9Y2U8 911 aa13.91□□□□□ -0.18
DDB1-214ENST00000539426 SALL2Q9Y467 1007 aaPredicted RBP13.91□□□□□ -0.18
DDB1-214ENST00000539426 ZNF804BA4D1E1 1349 aa13.9□□□□□ -0.18
DDB1-214ENST00000539426 SNAP23O00161 211 aa13.9□□□□□ -0.18
DDB1-214ENST00000539426 NCBP3Q53F19 620 aaKnown RBP13.9□□□□□ -0.18
DDB1-214ENST00000539426 STRIP1Q5VSL9 837 aa13.9□□□□□ -0.18
DDB1-214ENST00000539426 LINS1Q8NG48 757 aa13.9□□□□□ -0.18
DDB1-214ENST00000539426 MYH16Q9H6N6 1097 aa13.9□□□□□ -0.18
DDB1-214ENST00000539426 TNRC18O15417 2968 aaPredicted RBP13.9□□□□□ -0.18
DDB1-214ENST00000539426 F6X3S4 739 aa13.89□□□□□ -0.19
DDB1-214ENST00000539426 SASH1O94885 1247 aa13.89□□□□□ -0.19
DDB1-214ENST00000539426 RGS19P49795 217 aa13.89□□□□□ -0.19
DDB1-214ENST00000539426 FKBP1BP68106 108 aa13.89□□□□□ -0.19
DDB1-214ENST00000539426 EXOSC9Q06265 439 aaKnown RBP13.89□□□□□ -0.19
DDB1-214ENST00000539426 CHRNDQ07001 517 aa13.89□□□□□ -0.19
DDB1-214ENST00000539426 TTLL5Q6EMB2 1281 aa13.89□□□□□ -0.19
DDB1-214ENST00000539426 MPHOSPH8Q99549 860 aa13.89□□□□□ -0.19
DDB1-214ENST00000539426 ANKRD2Q9GZV1 360 aa13.89□□□□□ -0.19
DDB1-214ENST00000539426 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
DDB1-214ENST00000539426 MYO3BQ8WXR4 1341 aa13.89□□□□□ -0.19
DDB1-214ENST00000539426 IRS2Q9Y4H2 1338 aa13.89□□□□□ -0.19
DDB1-214ENST00000539426 UBE2Q2LH0YL09 131 aa13.88□□□□□ -0.19
DDB1-214ENST00000539426 KIAA0825Q8IV33 1275 aa13.88□□□□□ -0.19
DDB1-214ENST00000539426 OGFOD1Q8N543 542 aa13.88□□□□□ -0.19
DDB1-214ENST00000539426 ECM29Q5VYK3 1845 aa13.87□□□□□ -0.19
DDB1-214ENST00000539426 TAF5LO75529 589 aa13.87□□□□□ -0.19
DDB1-214ENST00000539426 GTF2IP78347 998 aa13.87□□□□□ -0.19
DDB1-214ENST00000539426 FOXO4P98177 505 aa13.87□□□□□ -0.19
DDB1-214ENST00000539426 MLLT1Q03111 559 aaPredicted RBP13.87□□□□□ -0.19
DDB1-214ENST00000539426 BEND3Q5T5X7 828 aa13.87□□□□□ -0.19
DDB1-214ENST00000539426 WDR63Q8IWG1 891 aa13.87□□□□□ -0.19
DDB1-214ENST00000539426 HELBQ8NG08 1087 aaPredicted RBP13.87□□□□□ -0.19
DDB1-214ENST00000539426 ZBED3Q96IU2 234 aaPredicted RBP13.87□□□□□ -0.19
DDB1-214ENST00000539426 CD209Q9NNX6 404 aa13.87□□□□□ -0.19
DDB1-214ENST00000539426 ANKRD18BA2A2Z9 1011 aa13.86□□□□□ -0.19
DDB1-214ENST00000539426 KCNJ4P48050 445 aa13.86□□□□□ -0.19
DDB1-214ENST00000539426 EPHA10Q5JZY3 1008 aa13.86□□□□□ -0.19
DDB1-214ENST00000539426 CERS5Q8N5B7 392 aa13.86□□□□□ -0.19
DDB1-214ENST00000539426 TTLL12Q14166 644 aaPredicted RBP13.85□□□□□ -0.19
DDB1-214ENST00000539426 CHMP3Q9Y3E7 222 aa13.85□□□□□ -0.19
DDB1-214ENST00000539426 ANP32CO43423 234 aa13.84□□□□□ -0.19
DDB1-214ENST00000539426 PTPN12Q05209 780 aaKnown RBP13.84□□□□□ -0.19
DDB1-214ENST00000539426 MKRN3Q13064 507 aaKnown RBP13.84□□□□□ -0.19
DDB1-214ENST00000539426 IFIT5Q13325 482 aaKnown RBP13.84□□□□□ -0.19
DDB1-214ENST00000539426 PRKG1Q13976 671 aa13.84□□□□□ -0.19
DDB1-214ENST00000539426 C15orf52Q6ZUT6 534 aaKnown RBP13.84□□□□□ -0.19
DDB1-214ENST00000539426 REM2Q8IYK8 340 aaPredicted RBP13.84□□□□□ -0.19
DDB1-214ENST00000539426 ZNF594Q96JF6 807 aaPredicted RBP13.84□□□□□ -0.19
DDB1-214ENST00000539426 HDAC9Q9UKV0 1011 aa13.84□□□□□ -0.19
DDB1-214ENST00000539426 FZD1Q9UP38 647 aa13.84□□□□□ -0.19
DDB1-214ENST00000539426 PCDHAC2Q9Y5I4 1007 aa13.84□□□□□ -0.19
DDB1-214ENST00000539426 IL1R1P14778 569 aa13.83□□□□□ -0.2
DDB1-214ENST00000539426 NF2P35240 595 aa13.83□□□□□ -0.2
DDB1-214ENST00000539426 MMP14P50281 582 aa13.83□□□□□ -0.2
DDB1-214ENST00000539426 LMBR1LQ6UX01 489 aa13.83□□□□□ -0.2
DDB1-214ENST00000539426 APOBEC3FQ8IUX4 373 aaKnown RBP13.83□□□□□ -0.2
DDB1-214ENST00000539426 JAG2Q9Y219 1238 aa13.83□□□□□ -0.2
DDB1-214ENST00000539426 AOX1Q06278 1338 aa13.83□□□□□ -0.2
DDB1-214ENST00000539426 SSC5DA1L4H1 1573 aa13.83□□□□□ -0.2
DDB1-214ENST00000539426 GRM8O00222 908 aa13.82□□□□□ -0.2
DDB1-214ENST00000539426 CTU1Q7Z7A3 348 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms