RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CCDC158Q5M9N0 1113 aa21.6■■□□□ 1.05
SFSWAP-207ENST00000538548 KIAA1468Q9P260 1216 aa21.6■■□□□ 1.05
SFSWAP-207ENST00000538548 ANXA1P04083 346 aa21.59■■□□□ 1.05
SFSWAP-207ENST00000538548 LRRFIP1Q32MZ4 808 aaKnown RBP21.59■■□□□ 1.05
SFSWAP-207ENST00000538548 ADALQ6DHV7 355 aa21.59■■□□□ 1.05
SFSWAP-207ENST00000538548 TRIM65Q6PJ69 517 aa21.59■■□□□ 1.05
SFSWAP-207ENST00000538548 U3KPZ7 1027 aaPredicted RBP21.59■■□□□ 1.05
SFSWAP-207ENST00000538548 A0A1W2PQ27 194 aa21.59■■□□□ 1.05
SFSWAP-207ENST00000538548 A0A1W2PQ64 194 aa21.59■■□□□ 1.05
SFSWAP-207ENST00000538548 A0A1W2PQD8 194 aa21.59■■□□□ 1.05
SFSWAP-207ENST00000538548 PTPDC1A2A3K4 754 aa21.59■■□□□ 1.05
SFSWAP-207ENST00000538548 NGDNQ8NEJ9 315 aaKnown RBP21.59■■□□□ 1.05
SFSWAP-207ENST00000538548 PCDHA7Q9UN72 937 aa21.59■■□□□ 1.05
SFSWAP-207ENST00000538548 MAP3K2Q9Y2U5 619 aa21.59■■□□□ 1.05
SFSWAP-207ENST00000538548 ABCC6O95255 1503 aa21.58■■□□□ 1.05
SFSWAP-207ENST00000538548 MED1Q15648 1581 aaPredicted RBP21.58■■□□□ 1.04
SFSWAP-207ENST00000538548 COL15A1P39059 1388 aa21.58■■□□□ 1.04
SFSWAP-207ENST00000538548 HOXC9P31274 260 aa21.58■■□□□ 1.04
SFSWAP-207ENST00000538548 SMARCE1Q969G3 411 aa21.58■■□□□ 1.04
SFSWAP-207ENST00000538548 NCAPD2Q15021 1401 aa21.57■■□□□ 1.04
SFSWAP-207ENST00000538548 CTDNEP1O95476 244 aa21.57■■□□□ 1.04
SFSWAP-207ENST00000538548 TBC1D8O95759 1140 aa21.57■■□□□ 1.04
SFSWAP-207ENST00000538548 FOSBP53539 338 aa21.57■■□□□ 1.04
SFSWAP-207ENST00000538548 PSME1Q06323 249 aa21.57■■□□□ 1.04
SFSWAP-207ENST00000538548 DBF4Q9UBU7 674 aaPredicted RBP21.57■■□□□ 1.04
SFSWAP-207ENST00000538548 KDM3BQ7LBC6 1761 aa21.57■■□□□ 1.04
SFSWAP-207ENST00000538548 URI1O94763 535 aaPredicted RBP21.57■■□□□ 1.04
SFSWAP-207ENST00000538548 SEC31AO94979 1220 aaKnown RBP21.57■■□□□ 1.04
SFSWAP-207ENST00000538548 CYP21A2P08686 494 aa21.57■■□□□ 1.04
SFSWAP-207ENST00000538548 C14orf37Q86TY3 774 aa21.57■■□□□ 1.04
SFSWAP-207ENST00000538548 CARD6Q9BX69 1037 aa21.57■■□□□ 1.04
SFSWAP-207ENST00000538548 PARP3Q9Y6F1 533 aa21.57■■□□□ 1.04
SFSWAP-207ENST00000538548 HMGB1P09429 215 aaKnown RBP21.56■■□□□ 1.04
SFSWAP-207ENST00000538548 OAS2P29728 719 aaKnown RBP21.56■■□□□ 1.04
SFSWAP-207ENST00000538548 HSPA2P54652 639 aa21.56■■□□□ 1.04
SFSWAP-207ENST00000538548 ST5P78524 1137 aa21.56■■□□□ 1.04
SFSWAP-207ENST00000538548 KRBA2Q6ZNG9 492 aa21.56■■□□□ 1.04
SFSWAP-207ENST00000538548 ILDR1Q86SU0 546 aaPredicted RBP21.56■■□□□ 1.04
SFSWAP-207ENST00000538548 A0A1B0GVL5 298 aa21.56■■□□□ 1.04
SFSWAP-207ENST00000538548 NCAPHQ15003 741 aa21.56■■□□□ 1.04
SFSWAP-207ENST00000538548 CC2D1AQ6P1N0 951 aaPredicted RBP21.56■■□□□ 1.04
SFSWAP-207ENST00000538548 KSR2Q6VAB6 950 aa21.56■■□□□ 1.04
SFSWAP-207ENST00000538548 LRRC2Q9BYS8 371 aa21.56■■□□□ 1.04
SFSWAP-207ENST00000538548 RTEL1Q9NZ71 1219 aa21.56■■□□□ 1.04
SFSWAP-207ENST00000538548 SASH3O75995 380 aa21.55■■□□□ 1.04
SFSWAP-207ENST00000538548 NDUFA8P51970 172 aa21.55■■□□□ 1.04
SFSWAP-207ENST00000538548 EVCP57679 992 aa21.55■■□□□ 1.04
SFSWAP-207ENST00000538548 NEDD4P46934 1319 aa21.55■■□□□ 1.04
SFSWAP-207ENST00000538548 SALL1Q9NSC2 1324 aa21.55■■□□□ 1.04
SFSWAP-207ENST00000538548 NLRP12P59046 1061 aa21.55■■□□□ 1.04
SFSWAP-207ENST00000538548 MAPK8IP2Q13387 824 aaPredicted RBP21.55■■□□□ 1.04
SFSWAP-207ENST00000538548 SMC1AQ14683 1233 aaKnown RBP21.55■■□□□ 1.04
SFSWAP-207ENST00000538548 CWF19L2Q2TBE0 894 aaKnown RBP21.55■■□□□ 1.04
SFSWAP-207ENST00000538548 KAZALD1Q96I82 304 aa21.55■■□□□ 1.04
SFSWAP-207ENST00000538548 SUCLG2Q96I99 432 aa21.55■■□□□ 1.04
SFSWAP-207ENST00000538548 RFX7Q2KHR2 1363 aa21.54■■□□□ 1.04
SFSWAP-207ENST00000538548 FANCGO15287 622 aa21.54■■□□□ 1.04
SFSWAP-207ENST00000538548 FCHSD1Q86WN1 690 aa21.54■■□□□ 1.04
SFSWAP-207ENST00000538548 GPR161Q8N6U8 529 aaKnown RBP21.54■■□□□ 1.04
SFSWAP-207ENST00000538548 BICC1Q9H694 974 aaKnown RBP21.54■■□□□ 1.04
SFSWAP-207ENST00000538548 ADAMTSL3P82987 1691 aa21.54■■□□□ 1.04
SFSWAP-207ENST00000538548 GRM8O00222 908 aa21.54■■□□□ 1.04
SFSWAP-207ENST00000538548 FANCCQ00597 558 aa21.54■■□□□ 1.04
SFSWAP-207ENST00000538548 DHX32Q7L7V1 743 aaKnown RBP21.54■■□□□ 1.04
SFSWAP-207ENST00000538548 TMX1Q9H3N1 280 aa21.54■■□□□ 1.04
SFSWAP-207ENST00000538548 PIK3C2AO00443 1686 aa21.54■■□□□ 1.04
SFSWAP-207ENST00000538548 UTYO14607 1347 aa21.53■■□□□ 1.04
SFSWAP-207ENST00000538548 IKBKBO14920 756 aa21.53■■□□□ 1.04
SFSWAP-207ENST00000538548 ZSCAN26Q16670 478 aa21.53■■□□□ 1.04
SFSWAP-207ENST00000538548 REXO1L1PQ8IX06 675 aa21.53■■□□□ 1.04
SFSWAP-207ENST00000538548 FMNL2Q96PY5 1086 aa21.53■■□□□ 1.04
SFSWAP-207ENST00000538548 SLC3A2P08195 630 aaKnown RBP21.53■■□□□ 1.04
SFSWAP-207ENST00000538548 NFATC2IPQ8NCF5 419 aa21.53■■□□□ 1.04
SFSWAP-207ENST00000538548 EDC3Q96F86 508 aaKnown RBP21.53■■□□□ 1.04
SFSWAP-207ENST00000538548 MPHOSPH8Q99549 860 aa21.53■■□□□ 1.04
SFSWAP-207ENST00000538548 SIL1Q9H173 461 aa21.53■■□□□ 1.04
SFSWAP-207ENST00000538548 RGPD8O14715 1765 aaPredicted RBP21.53■■□□□ 1.04
SFSWAP-207ENST00000538548 MRC1P22897 1456 aa21.53■■□□□ 1.04
SFSWAP-207ENST00000538548 ZSCAN12O43309 604 aa21.52■■□□□ 1.04
SFSWAP-207ENST00000538548 KCNQ3O43525 872 aa21.52■■□□□ 1.04
SFSWAP-207ENST00000538548 PLCD3Q8N3E9 789 aa21.52■■□□□ 1.04
SFSWAP-207ENST00000538548 RASSF4Q9H2L5 321 aa21.52■■□□□ 1.04
SFSWAP-207ENST00000538548 ZCCHC17Q9NP64 241 aaKnown RBP21.52■■□□□ 1.04
SFSWAP-207ENST00000538548 CWC15Q9P013 229 aaKnown RBP21.52■■□□□ 1.04
SFSWAP-207ENST00000538548 DIP2AQ14689 1571 aa21.52■■□□□ 1.04
SFSWAP-207ENST00000538548 LINC00301Q8NCQ3 95 aa21.52■■□□□ 1.04
SFSWAP-207ENST00000538548 LINS1Q8NG48 757 aa21.52■■□□□ 1.04
SFSWAP-207ENST00000538548 KCNG4Q8TDN1 519 aa21.52■■□□□ 1.04
SFSWAP-207ENST00000538548 ATP5JP18859 108 aa21.51■■□□□ 1.03
SFSWAP-207ENST00000538548 STOX1Q6ZVD7 989 aa21.51■■□□□ 1.03
SFSWAP-207ENST00000538548 AK7Q96M32 723 aa21.51■■□□□ 1.03
SFSWAP-207ENST00000538548 AGXT2Q9BYV1 514 aa21.51■■□□□ 1.03
SFSWAP-207ENST00000538548 ARFGAP3Q9NP61 516 aa21.51■■□□□ 1.03
SFSWAP-207ENST00000538548 ZNF609O15014 1411 aa21.51■■□□□ 1.03
SFSWAP-207ENST00000538548 LMOD1P29536 600 aaPredicted RBP21.51■■□□□ 1.03
SFSWAP-207ENST00000538548 APOBRQ0VD83 1088 aa21.51■■□□□ 1.03
SFSWAP-207ENST00000538548 SF3A1Q15459 793 aaKnown RBP21.51■■□□□ 1.03
SFSWAP-207ENST00000538548 LGR6Q9HBX8 967 aa21.51■■□□□ 1.03
SFSWAP-207ENST00000538548 PSD3Q9NYI0 1048 aa21.51■■□□□ 1.03
SFSWAP-207ENST00000538548 CBFA2T2O43439 604 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms