RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 GMPSP49915 693 aaPredicted RBP16.43■□□□□ 0.22
COPS7A-207ENST00000538375 EAPPQ56P03 285 aaPredicted RBP16.43■□□□□ 0.22
COPS7A-207ENST00000538375 PODNQ7Z5L7 613 aa16.43■□□□□ 0.22
COPS7A-207ENST00000538375 CLEC11AQ9Y240 323 aa16.43■□□□□ 0.22
COPS7A-207ENST00000538375 MVPQ14764 893 aaKnown RBP16.42■□□□□ 0.22
COPS7A-207ENST00000538375 L3MBTL3Q96JM7 780 aaPredicted RBP16.42■□□□□ 0.22
COPS7A-207ENST00000538375 COA1Q9GZY4 146 aa16.42■□□□□ 0.22
COPS7A-207ENST00000538375 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
COPS7A-207ENST00000538375 PDE8BO95263 885 aa16.41■□□□□ 0.22
COPS7A-207ENST00000538375 EPHX2P34913 555 aa16.41■□□□□ 0.22
COPS7A-207ENST00000538375 EPS15P42566 896 aa16.41■□□□□ 0.22
COPS7A-207ENST00000538375 UBE4AQ14139 1066 aa16.41■□□□□ 0.22
COPS7A-207ENST00000538375 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
COPS7A-207ENST00000538375 SMC1BQ8NDV3 1235 aa16.41■□□□□ 0.22
COPS7A-207ENST00000538375 TAF1DQ9H5J8 278 aaPredicted RBP16.41■□□□□ 0.22
COPS7A-207ENST00000538375 CEP126Q9P2H0 1117 aa16.41■□□□□ 0.22
COPS7A-207ENST00000538375 DDX19BQ9UMR2 479 aa16.41■□□□□ 0.22
COPS7A-207ENST00000538375 LTBP1Q14766 1721 aa16.4■□□□□ 0.22
COPS7A-207ENST00000538375 WDR90Q96KV7 1748 aa16.4■□□□□ 0.22
COPS7A-207ENST00000538375 PNMA6EA0A0J9YXQ4 647 aa16.4■□□□□ 0.22
COPS7A-207ENST00000538375 USP17L3A6NCW0 530 aa16.4■□□□□ 0.22
COPS7A-207ENST00000538375 USP17L4A6NCW7 530 aa16.4■□□□□ 0.22
COPS7A-207ENST00000538375 SCNN1DP51172 638 aa16.4■□□□□ 0.22
COPS7A-207ENST00000538375 ATP8B2P98198 1209 aa16.4■□□□□ 0.22
COPS7A-207ENST00000538375 PDE3AQ14432 1141 aa16.4■□□□□ 0.22
COPS7A-207ENST00000538375 USP17L1Q7RTZ2 530 aa16.4■□□□□ 0.22
COPS7A-207ENST00000538375 ZNF804AQ7Z570 1209 aa16.4■□□□□ 0.22
COPS7A-207ENST00000538375 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
COPS7A-207ENST00000538375 CD209Q9NNX6 404 aa16.4■□□□□ 0.22
COPS7A-207ENST00000538375 COPRSQ9NQ92 184 aa16.4■□□□□ 0.22
COPS7A-207ENST00000538375 CNOT7Q9UIV1 285 aaKnown RBP16.4■□□□□ 0.22
COPS7A-207ENST00000538375 PCNTO95613 3336 aa16.4■□□□□ 0.22
COPS7A-207ENST00000538375 H7C1D1 291 aa16.39■□□□□ 0.21
COPS7A-207ENST00000538375 CIAO1O76071 339 aa16.39■□□□□ 0.21
COPS7A-207ENST00000538375 IL15P40933 162 aaPredicted RBP16.39■□□□□ 0.21
COPS7A-207ENST00000538375 GYG1P46976 350 aa16.39■□□□□ 0.21
COPS7A-207ENST00000538375 G3BP1Q13283 466 aaKnown RBP eCLIP16.39■□□□□ 0.21
COPS7A-207ENST00000538375 MTX1Q13505 466 aa16.39■□□□□ 0.21
COPS7A-207ENST00000538375 ATG9AQ7Z3C6 839 aa16.39■□□□□ 0.21
COPS7A-207ENST00000538375 PNMA8AQ86V59 439 aaPredicted RBP16.39■□□□□ 0.21
COPS7A-207ENST00000538375 VPS37DQ86XT2 251 aa16.39■□□□□ 0.21
COPS7A-207ENST00000538375 GPRC5DQ9NZD1 345 aa16.39■□□□□ 0.21
COPS7A-207ENST00000538375 FBXO3Q9UK99 471 aa16.39■□□□□ 0.21
COPS7A-207ENST00000538375 VIL1P09327 827 aaKnown RBP16.38■□□□□ 0.21
COPS7A-207ENST00000538375 IFIT1P09914 478 aaKnown RBP16.38■□□□□ 0.21
COPS7A-207ENST00000538375 HIBADHP31937 336 aaKnown RBP16.38■□□□□ 0.21
COPS7A-207ENST00000538375 GTF2IP78347 998 aa16.38■□□□□ 0.21
COPS7A-207ENST00000538375 PUM3Q15397 648 aaKnown RBP16.38■□□□□ 0.21
COPS7A-207ENST00000538375 CAVIN4Q5BKX8 364 aa16.38■□□□□ 0.21
COPS7A-207ENST00000538375 RBM26Q5T8P6 1007 aaKnown RBP16.38■□□□□ 0.21
COPS7A-207ENST00000538375 TTLL5Q6EMB2 1281 aa16.38■□□□□ 0.21
COPS7A-207ENST00000538375 C15orf52Q6ZUT6 534 aaKnown RBP16.38■□□□□ 0.21
COPS7A-207ENST00000538375 FRAT2O75474 233 aaPredicted RBP16.37■□□□□ 0.21
COPS7A-207ENST00000538375 POTEIP0CG38 1075 aa16.37■□□□□ 0.21
COPS7A-207ENST00000538375 POTEJP0CG39 1038 aa16.37■□□□□ 0.21
COPS7A-207ENST00000538375 SLC5A1P13866 664 aa16.37■□□□□ 0.21
COPS7A-207ENST00000538375 OS9Q13438 667 aaPredicted RBP16.37■□□□□ 0.21
COPS7A-207ENST00000538375 RSBN1LQ6PCB5 846 aaPredicted RBP16.37■□□□□ 0.21
COPS7A-207ENST00000538375 MICALL2Q8IY33 904 aa16.37■□□□□ 0.21
COPS7A-207ENST00000538375 VGLL2Q8N8G2 317 aa16.37■□□□□ 0.21
COPS7A-207ENST00000538375 MXD3Q9BW11 206 aa16.37■□□□□ 0.21
COPS7A-207ENST00000538375 SHTN1A0MZ66 631 aa16.36■□□□□ 0.21
COPS7A-207ENST00000538375 SURF6O75683 361 aaKnown RBP16.36■□□□□ 0.21
COPS7A-207ENST00000538375 RPS12P25398 132 aaKnown RBP16.36■□□□□ 0.21
COPS7A-207ENST00000538375 RRP1P56182 461 aaKnown RBP16.36■□□□□ 0.21
COPS7A-207ENST00000538375 DPF2Q92785 391 aa16.36■□□□□ 0.21
COPS7A-207ENST00000538375 FAM84BQ96KN1 310 aaPredicted RBP16.36■□□□□ 0.21
COPS7A-207ENST00000538375 ADARB2Q9NS39 739 aaKnown RBP16.36■□□□□ 0.21
COPS7A-207ENST00000538375 JAG2Q9Y219 1238 aa16.36■□□□□ 0.21
COPS7A-207ENST00000538375 TFCP2Q12800 502 aa16.35■□□□□ 0.21
COPS7A-207ENST00000538375 ATP2B3Q16720 1220 aa16.35■□□□□ 0.21
COPS7A-207ENST00000538375 STRIP1Q5VSL9 837 aa16.35■□□□□ 0.21
COPS7A-207ENST00000538375 CHADLQ6NUI6 762 aa16.35■□□□□ 0.21
COPS7A-207ENST00000538375 USP50Q70EL3 339 aaPredicted RBP16.35■□□□□ 0.21
COPS7A-207ENST00000538375 LDHDQ86WU2 507 aa16.35■□□□□ 0.21
COPS7A-207ENST00000538375 SSH3Q8TE77 659 aa16.35■□□□□ 0.21
COPS7A-207ENST00000538375 LPIN2Q92539 896 aa16.35■□□□□ 0.21
COPS7A-207ENST00000538375 ZBTB40Q9NUA8 1239 aa16.35■□□□□ 0.21
COPS7A-207ENST00000538375 IQSEC3Q9UPP2 1182 aaPredicted RBP16.35■□□□□ 0.21
COPS7A-207ENST00000538375 IL1R1P14778 569 aa16.34■□□□□ 0.21
COPS7A-207ENST00000538375 BCAMP50895 628 aa16.34■□□□□ 0.21
COPS7A-207ENST00000538375 POLA2Q14181 598 aa16.34■□□□□ 0.21
COPS7A-207ENST00000538375 TBC1D10BQ4KMP7 808 aaPredicted RBP16.34■□□□□ 0.21
COPS7A-207ENST00000538375 DACT2Q5SW24 774 aa16.34■□□□□ 0.21
COPS7A-207ENST00000538375 COL13A1Q5TAT6 717 aaPredicted RBP16.34■□□□□ 0.21
COPS7A-207ENST00000538375 CEP85Q6P2H3 762 aa16.34■□□□□ 0.21
COPS7A-207ENST00000538375 SAMD7Q7Z3H4 446 aa16.34■□□□□ 0.21
COPS7A-207ENST00000538375 AGBL3Q8NEM8 1001 aa16.34■□□□□ 0.21
COPS7A-207ENST00000538375 NEUROD6Q96NK8 337 aa16.34■□□□□ 0.21
COPS7A-207ENST00000538375 IRS2Q9Y4H2 1338 aa16.34■□□□□ 0.21
COPS7A-207ENST00000538375 USP17L8P0C7I0 530 aa16.33■□□□□ 0.2
COPS7A-207ENST00000538375 FGFR2P21802 821 aa16.33■□□□□ 0.2
COPS7A-207ENST00000538375 TIMM10P62072 90 aa16.33■□□□□ 0.2
COPS7A-207ENST00000538375 FBXO33Q7Z6M2 555 aa16.33■□□□□ 0.2
COPS7A-207ENST00000538375 AKAP2Q9Y2D5 859 aa16.33■□□□□ 0.2
COPS7A-207ENST00000538375 SCN4AP35499 1836 aa16.33■□□□□ 0.2
COPS7A-207ENST00000538375 F8W031 263 aaPredicted RBP16.32■□□□□ 0.2
COPS7A-207ENST00000538375 SASH1O94885 1247 aa16.32■□□□□ 0.2
COPS7A-207ENST00000538375 CHAF1AQ13111 956 aaPredicted RBP16.32■□□□□ 0.2
COPS7A-207ENST00000538375 MAP1SQ66K74 1059 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms