RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 EIF5P55010 431 aaKnown RBP16.63■□□□□ 0.25
LIMK1-208ENST00000538333 METTL24Q5JXM2 366 aa16.63■□□□□ 0.25
LIMK1-208ENST00000538333 DHX32Q7L7V1 743 aaKnown RBP16.63■□□□□ 0.25
LIMK1-208ENST00000538333 ZFYP08048 801 aaPredicted RBP16.62■□□□□ 0.25
LIMK1-208ENST00000538333 ZAP70P43403 619 aa16.62■□□□□ 0.25
LIMK1-208ENST00000538333 EXOSC10Q01780 885 aaKnown RBP16.62■□□□□ 0.25
LIMK1-208ENST00000538333 DDB1Q16531 1140 aa16.62■□□□□ 0.25
LIMK1-208ENST00000538333 LRRFIP1Q32MZ4 808 aaKnown RBP16.62■□□□□ 0.25
LIMK1-208ENST00000538333 MYH14Q7Z406 1995 aaKnown RBP16.62■□□□□ 0.25
LIMK1-208ENST00000538333 PHF14O94880 888 aa16.62■□□□□ 0.25
LIMK1-208ENST00000538333 ADAMTS2O95450 1211 aa16.62■□□□□ 0.25
LIMK1-208ENST00000538333 INTS5Q6P9B9 1019 aaKnown RBP16.62■□□□□ 0.25
LIMK1-208ENST00000538333 ANP32BQ92688 251 aaKnown RBP16.62■□□□□ 0.25
LIMK1-208ENST00000538333 BRF1Q92994 677 aa16.62■□□□□ 0.25
LIMK1-208ENST00000538333 LRRC2Q9BYS8 371 aa16.62■□□□□ 0.25
LIMK1-208ENST00000538333 MYO5AQ9Y4I1 1855 aaKnown RBP16.61■□□□□ 0.25
LIMK1-208ENST00000538333 E7EWF7 191 aa16.61■□□□□ 0.25
LIMK1-208ENST00000538333 CSPP1Q1MSJ5 1256 aa16.61■□□□□ 0.25
LIMK1-208ENST00000538333 PI16Q6UXB8 463 aa16.61■□□□□ 0.25
LIMK1-208ENST00000538333 PDLIM2Q96JY6 352 aa16.61■□□□□ 0.25
LIMK1-208ENST00000538333 ZNF512BQ96KM6 892 aaPredicted RBP16.61■□□□□ 0.25
LIMK1-208ENST00000538333 ARAP2Q8WZ64 1704 aa16.61■□□□□ 0.25
LIMK1-208ENST00000538333 JAK2O60674 1132 aa16.61■□□□□ 0.25
LIMK1-208ENST00000538333 MCAMP43121 646 aa16.61■□□□□ 0.25
LIMK1-208ENST00000538333 CCDC183Q5T5S1 534 aa16.61■□□□□ 0.25
LIMK1-208ENST00000538333 MARCH10Q8NA82 808 aaPredicted RBP16.61■□□□□ 0.25
LIMK1-208ENST00000538333 TRIM44Q96DX7 344 aaPredicted RBP16.61■□□□□ 0.25
LIMK1-208ENST00000538333 CNNM1Q9NRU3 951 aa16.61■□□□□ 0.25
LIMK1-208ENST00000538333 PFKFB2O60825 505 aa16.6■□□□□ 0.25
LIMK1-208ENST00000538333 SCRN1Q12765 414 aa16.6■□□□□ 0.25
LIMK1-208ENST00000538333 APPBP2Q92624 585 aa16.6■□□□□ 0.25
LIMK1-208ENST00000538333 TSPY26PQ9H489 355 aa16.6■□□□□ 0.25
LIMK1-208ENST00000538333 CCDC87Q9NVE4 849 aa16.6■□□□□ 0.25
LIMK1-208ENST00000538333 ESPNB1AK53 854 aa16.6■□□□□ 0.25
LIMK1-208ENST00000538333 PDE8BO95263 885 aa16.6■□□□□ 0.25
LIMK1-208ENST00000538333 TTLL5Q6EMB2 1281 aa16.6■□□□□ 0.25
LIMK1-208ENST00000538333 FERMT3Q86UX7 667 aa16.6■□□□□ 0.25
LIMK1-208ENST00000538333 SMARCC2Q8TAQ2 1214 aa16.6■□□□□ 0.25
LIMK1-208ENST00000538333 AK7Q96M32 723 aa16.6■□□□□ 0.25
LIMK1-208ENST00000538333 SPATA31A5Q5VU36 1347 aa16.6■□□□□ 0.25
LIMK1-208ENST00000538333 SPATA31A7Q8IWB4 1347 aa16.6■□□□□ 0.25
LIMK1-208ENST00000538333 DDX60Q8IY21 1712 aaKnown RBP16.59■□□□□ 0.25
LIMK1-208ENST00000538333 HSP90B1P14625 803 aaKnown RBP16.59■□□□□ 0.25
LIMK1-208ENST00000538333 CLCN1P35523 988 aa16.59■□□□□ 0.25
LIMK1-208ENST00000538333 CRKLP46109 303 aaKnown RBP16.59■□□□□ 0.25
LIMK1-208ENST00000538333 ELP1O95163 1332 aa16.58■□□□□ 0.25
LIMK1-208ENST00000538333 PRKCSHP14314 528 aaPredicted RBP16.58■□□□□ 0.25
LIMK1-208ENST00000538333 KRT85P78386 507 aa16.58■□□□□ 0.25
LIMK1-208ENST00000538333 TTC6Q86TZ1 520 aa16.58■□□□□ 0.25
LIMK1-208ENST00000538333 FBXL16Q8N461 479 aa16.58■□□□□ 0.25
LIMK1-208ENST00000538333 LLPHQ9BRT6 129 aaKnown RBP16.58■□□□□ 0.25
LIMK1-208ENST00000538333 PUS7LQ9H0K6 701 aaKnown RBP16.58■□□□□ 0.25
LIMK1-208ENST00000538333 LOC102724428A0A0B4J2F2 783 aa16.58■□□□□ 0.24
LIMK1-208ENST00000538333 ATP6V1AP38606 617 aa16.58■□□□□ 0.24
LIMK1-208ENST00000538333 SIK1P57059 783 aa16.58■□□□□ 0.24
LIMK1-208ENST00000538333 WASHC4Q2M389 1173 aa16.58■□□□□ 0.24
LIMK1-208ENST00000538333 SUSD4Q5VX71 490 aa16.58■□□□□ 0.24
LIMK1-208ENST00000538333 FAM173BQ6P4H8 233 aa16.58■□□□□ 0.24
LIMK1-208ENST00000538333 ACSBG1Q96GR2 724 aa16.58■□□□□ 0.24
LIMK1-208ENST00000538333 LAMB2P55268 1798 aa16.58■□□□□ 0.24
LIMK1-208ENST00000538333 ATRNO75882 1429 aa16.57■□□□□ 0.24
LIMK1-208ENST00000538333 APOBRQ0VD83 1088 aa16.57■□□□□ 0.24
LIMK1-208ENST00000538333 ITPK1Q13572 414 aa16.57■□□□□ 0.24
LIMK1-208ENST00000538333 CTNNA3Q9UI47 895 aa16.57■□□□□ 0.24
LIMK1-208ENST00000538333 COL5A3P25940 1745 aaPredicted RBP16.57■□□□□ 0.24
LIMK1-208ENST00000538333 MYH15Q9Y2K3 1946 aa16.57■□□□□ 0.24
LIMK1-208ENST00000538333 CAMTA2O94983 1202 aa16.57■□□□□ 0.24
LIMK1-208ENST00000538333 LETM1O95202 739 aaPredicted RBP16.57■□□□□ 0.24
LIMK1-208ENST00000538333 FGFR2P21802 821 aa16.57■□□□□ 0.24
LIMK1-208ENST00000538333 FGD1P98174 961 aa16.57■□□□□ 0.24
LIMK1-208ENST00000538333 BARGINQ6ZT62 677 aa16.57■□□□□ 0.24
LIMK1-208ENST00000538333 NSUN7Q8NE18 718 aaKnown RBP16.57■□□□□ 0.24
LIMK1-208ENST00000538333 CTDNEP1O95476 244 aa16.56■□□□□ 0.24
LIMK1-208ENST00000538333 FGAP02671 866 aa16.56■□□□□ 0.24
LIMK1-208ENST00000538333 ARID4AP29374 1257 aaPredicted RBP16.56■□□□□ 0.24
LIMK1-208ENST00000538333 ADD2P35612 726 aa16.56■□□□□ 0.24
LIMK1-208ENST00000538333 KLHL34Q8N239 644 aa16.56■□□□□ 0.24
LIMK1-208ENST00000538333 RNF214Q8ND24 703 aa16.56■□□□□ 0.24
LIMK1-208ENST00000538333 SALL1Q9NSC2 1324 aa16.56■□□□□ 0.24
LIMK1-208ENST00000538333 GPAA1O43292 621 aa16.55■□□□□ 0.24
LIMK1-208ENST00000538333 EVCP57679 992 aa16.55■□□□□ 0.24
LIMK1-208ENST00000538333 CCDC102BQ68D86 513 aa16.55■□□□□ 0.24
LIMK1-208ENST00000538333 ZNF274Q96GC6 653 aaPredicted RBP16.55■□□□□ 0.24
LIMK1-208ENST00000538333 MROH5Q6ZUA9 1318 aa16.55■□□□□ 0.24
LIMK1-208ENST00000538333 DOCK2Q92608 1830 aa16.55■□□□□ 0.24
LIMK1-208ENST00000538333 PHKA1P46020 1223 aa16.55■□□□□ 0.24
LIMK1-208ENST00000538333 RESTQ13127 1097 aa16.55■□□□□ 0.24
LIMK1-208ENST00000538333 PUM3Q15397 648 aaKnown RBP16.55■□□□□ 0.24
LIMK1-208ENST00000538333 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.55■□□□□ 0.24
LIMK1-208ENST00000538333 BCORQ6W2J9 1755 aa16.55■□□□□ 0.24
LIMK1-208ENST00000538333 ZNF831Q5JPB2 1677 aa16.55■□□□□ 0.24
LIMK1-208ENST00000538333 HCLS1P14317 486 aaPredicted RBP16.54■□□□□ 0.24
LIMK1-208ENST00000538333 TTF1Q15361 905 aaPredicted RBP16.54■□□□□ 0.24
LIMK1-208ENST00000538333 IMMTQ16891 758 aaKnown RBP16.54■□□□□ 0.24
LIMK1-208ENST00000538333 LPIN2Q92539 896 aa16.54■□□□□ 0.24
LIMK1-208ENST00000538333 DDX11Q96FC9 970 aa16.54■□□□□ 0.24
LIMK1-208ENST00000538333 FUCA2Q9BTY2 467 aa16.54■□□□□ 0.24
LIMK1-208ENST00000538333 UTP14AQ9BVJ6 771 aaKnown RBP16.54■□□□□ 0.24
LIMK1-208ENST00000538333 SCAND2PQ9GZW5 306 aaPredicted RBP16.54■□□□□ 0.24
LIMK1-208ENST00000538333 PIH1D3Q9NQM4 214 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms