RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CXCL9Q07325 125 aa16.3■□□□□ 0.2
CHFR-216ENST00000538235 TFCP2Q12800 502 aa16.3■□□□□ 0.2
CHFR-216ENST00000538235 C15orf52Q6ZUT6 534 aaKnown RBP16.3■□□□□ 0.2
CHFR-216ENST00000538235 EXOC6BQ9Y2D4 811 aa16.3■□□□□ 0.2
CHFR-216ENST00000538235 RAD17O75943 681 aa16.29■□□□□ 0.2
CHFR-216ENST00000538235 GYG1P46976 350 aa16.29■□□□□ 0.2
CHFR-216ENST00000538235 NIM1KQ8IY84 436 aa16.29■□□□□ 0.2
CHFR-216ENST00000538235 MXD3Q9BW11 206 aa16.29■□□□□ 0.2
CHFR-216ENST00000538235 NOP58Q9Y2X3 529 aaKnown RBP16.29■□□□□ 0.2
CHFR-216ENST00000538235 ZNRF3Q9ULT6 936 aa16.28■□□□□ 0.2
CHFR-216ENST00000538235 ECM29Q5VYK3 1845 aa16.27■□□□□ 0.2
CHFR-216ENST00000538235 GLTPD2A6NH11 291 aa16.27■□□□□ 0.2
CHFR-216ENST00000538235 IL15P40933 162 aaPredicted RBP16.27■□□□□ 0.2
CHFR-216ENST00000538235 SCNN1DP51172 638 aa16.27■□□□□ 0.2
CHFR-216ENST00000538235 UBE4AQ14139 1066 aa16.27■□□□□ 0.2
CHFR-216ENST00000538235 FAM84BQ96KN1 310 aaPredicted RBP16.27■□□□□ 0.2
CHFR-216ENST00000538235 EYA3Q99504 573 aa16.27■□□□□ 0.2
CHFR-216ENST00000538235 TMX4Q9H1E5 349 aaPredicted RBP16.27■□□□□ 0.2
CHFR-216ENST00000538235 VPS33BQ9H267 617 aa16.27■□□□□ 0.2
CHFR-216ENST00000538235 FBXO3Q9UK99 471 aa16.27■□□□□ 0.2
CHFR-216ENST00000538235 HDAC5Q9UQL6 1122 aa16.27■□□□□ 0.2
CHFR-216ENST00000538235 DOCK2Q92608 1830 aa16.26■□□□□ 0.19
CHFR-216ENST00000538235 PSMD14O00487 310 aa16.26■□□□□ 0.19
CHFR-216ENST00000538235 SURF6O75683 361 aaKnown RBP16.26■□□□□ 0.19
CHFR-216ENST00000538235 ZC3H12CQ9C0D7 883 aaKnown RBP16.26■□□□□ 0.19
CHFR-216ENST00000538235 CD209Q9NNX6 404 aa16.26■□□□□ 0.19
CHFR-216ENST00000538235 TLR7Q9NYK1 1049 aaKnown RBP16.26■□□□□ 0.19
CHFR-216ENST00000538235 JAG2Q9Y219 1238 aa16.26■□□□□ 0.19
CHFR-216ENST00000538235 ZBTB12Q9Y330 459 aaPredicted RBP16.26■□□□□ 0.19
CHFR-216ENST00000538235 POLR2AP24928 1970 aaKnown RBP16.26■□□□□ 0.19
CHFR-216ENST00000538235 KIF3CO14782 793 aa16.25■□□□□ 0.19
CHFR-216ENST00000538235 KCNJ4P48050 445 aa16.25■□□□□ 0.19
CHFR-216ENST00000538235 PUM3Q15397 648 aaKnown RBP16.25■□□□□ 0.19
CHFR-216ENST00000538235 ATP2B3Q16720 1220 aa16.25■□□□□ 0.19
CHFR-216ENST00000538235 FBXO33Q7Z6M2 555 aa16.25■□□□□ 0.19
CHFR-216ENST00000538235 RPAP2Q8IXW5 612 aaPredicted RBP16.25■□□□□ 0.19
CHFR-216ENST00000538235 CERS5Q8N5B7 392 aa16.25■□□□□ 0.19
CHFR-216ENST00000538235 JDP2Q8WYK2 163 aa16.25■□□□□ 0.19
CHFR-216ENST00000538235 IQSEC3Q9UPP2 1182 aaPredicted RBP16.25■□□□□ 0.19
CHFR-216ENST00000538235 MAST2Q6P0Q8 1798 aa16.24■□□□□ 0.19
CHFR-216ENST00000538235 POTEIP0CG38 1075 aa16.24■□□□□ 0.19
CHFR-216ENST00000538235 POTEJP0CG39 1038 aa16.24■□□□□ 0.19
CHFR-216ENST00000538235 PHKA1P46020 1223 aa16.24■□□□□ 0.19
CHFR-216ENST00000538235 BCAMP50895 628 aa16.24■□□□□ 0.19
CHFR-216ENST00000538235 TIMM10P62072 90 aa16.24■□□□□ 0.19
CHFR-216ENST00000538235 GRIK5Q16478 980 aa16.24■□□□□ 0.19
CHFR-216ENST00000538235 L3MBTL3Q96JM7 780 aaPredicted RBP16.24■□□□□ 0.19
CHFR-216ENST00000538235 GJA3Q9Y6H8 435 aa16.24■□□□□ 0.19
CHFR-216ENST00000538235 A0A1B0GUL7 405 aa16.23■□□□□ 0.19
CHFR-216ENST00000538235 EGFRP00533 1210 aa16.23■□□□□ 0.19
CHFR-216ENST00000538235 IL1R1P14778 569 aa16.23■□□□□ 0.19
CHFR-216ENST00000538235 GMPSP49915 693 aaPredicted RBP16.23■□□□□ 0.19
CHFR-216ENST00000538235 DACT2Q5SW24 774 aa16.23■□□□□ 0.19
CHFR-216ENST00000538235 CIAPIN1Q6FI81 312 aa16.23■□□□□ 0.19
CHFR-216ENST00000538235 TDRD7Q8NHU6 1098 aaKnown RBP16.23■□□□□ 0.19
CHFR-216ENST00000538235 GMLQ99445 158 aa16.23■□□□□ 0.19
CHFR-216ENST00000538235 COA1Q9GZY4 146 aa16.23■□□□□ 0.19
CHFR-216ENST00000538235 CEP126Q9P2H0 1117 aa16.23■□□□□ 0.19
CHFR-216ENST00000538235 TNNI3KQ59H18 835 aa16.22■□□□□ 0.19
CHFR-216ENST00000538235 GPC2Q8N158 579 aa16.22■□□□□ 0.19
CHFR-216ENST00000538235 LPIN2Q92539 896 aa16.22■□□□□ 0.19
CHFR-216ENST00000538235 EAF2Q96CJ1 260 aaPredicted RBP16.22■□□□□ 0.19
CHFR-216ENST00000538235 RRAGCQ9HB90 399 aa16.22■□□□□ 0.19
CHFR-216ENST00000538235 IL1RAPL2Q9NP60 686 aa16.22■□□□□ 0.19
CHFR-216ENST00000538235 FPGT-TNNI3KV9GXZ4 949 aa16.22■□□□□ 0.19
CHFR-216ENST00000538235 APBB1O00213 710 aa16.21■□□□□ 0.19
CHFR-216ENST00000538235 VIL1P09327 827 aaKnown RBP16.21■□□□□ 0.19
CHFR-216ENST00000538235 EPS15P42566 896 aa16.21■□□□□ 0.19
CHFR-216ENST00000538235 EIF6P56537 245 aaKnown RBP16.21■□□□□ 0.19
CHFR-216ENST00000538235 G3BP1Q13283 466 aaKnown RBP eCLIP16.21■□□□□ 0.19
CHFR-216ENST00000538235 SCARF1Q14162 830 aa16.21■□□□□ 0.19
CHFR-216ENST00000538235 XAGE2Q96GT9 111 aa16.21■□□□□ 0.19
CHFR-216ENST00000538235 DBNDD2Q9BQY9 259 aa16.21■□□□□ 0.19
CHFR-216ENST00000538235 DBNLQ9UJU6 430 aaKnown RBP16.21■□□□□ 0.19
CHFR-216ENST00000538235 AOX1Q06278 1338 aa16.2■□□□□ 0.18
CHFR-216ENST00000538235 CDK5RAP2Q96SN8 1893 aa16.2■□□□□ 0.18
CHFR-216ENST00000538235 MYH2Q9UKX2 1941 aa16.2■□□□□ 0.18
CHFR-216ENST00000538235 SMARCA5O60264 1052 aaPredicted RBP16.2■□□□□ 0.18
CHFR-216ENST00000538235 IGHDP01880 384 aa16.2■□□□□ 0.18
CHFR-216ENST00000538235 SLC5A1P13866 664 aa16.2■□□□□ 0.18
CHFR-216ENST00000538235 HIBADHP31937 336 aaKnown RBP16.2■□□□□ 0.18
CHFR-216ENST00000538235 GTF2IP78347 998 aa16.2■□□□□ 0.18
CHFR-216ENST00000538235 PI16Q6UXB8 463 aa16.2■□□□□ 0.18
CHFR-216ENST00000538235 PODNQ7Z5L7 613 aa16.2■□□□□ 0.18
CHFR-216ENST00000538235 RHPN1Q8TCX5 695 aa16.2■□□□□ 0.18
CHFR-216ENST00000538235 TRPM4Q8TD43 1214 aa16.2■□□□□ 0.18
CHFR-216ENST00000538235 PCDHAC2Q9Y5I4 1007 aa16.2■□□□□ 0.18
CHFR-216ENST00000538235 MYH7P12883 1935 aa16.19■□□□□ 0.18
CHFR-216ENST00000538235 ZNF804AQ7Z570 1209 aa16.19■□□□□ 0.18
CHFR-216ENST00000538235 CCDC8Q9H0W5 538 aaPredicted RBP16.19■□□□□ 0.18
CHFR-216ENST00000538235 DCTPP1Q9H773 170 aa16.19■□□□□ 0.18
CHFR-216ENST00000538235 GPBP1L1Q9HC44 474 aaPredicted RBP16.19■□□□□ 0.18
CHFR-216ENST00000538235 GPRC5DQ9NZD1 345 aa16.19■□□□□ 0.18
CHFR-216ENST00000538235 FAM205AQ6ZU69 1335 aa16.19■□□□□ 0.18
CHFR-216ENST00000538235 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
CHFR-216ENST00000538235 USP17L3A6NCW0 530 aa16.18■□□□□ 0.18
CHFR-216ENST00000538235 USP17L4A6NCW7 530 aa16.18■□□□□ 0.18
CHFR-216ENST00000538235 IFIT1P09914 478 aaKnown RBP16.18■□□□□ 0.18
CHFR-216ENST00000538235 HIRAP54198 1017 aaPredicted RBP16.18■□□□□ 0.18
CHFR-216ENST00000538235 OS9Q13438 667 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms