RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 SPATA31A7Q8IWB4 1347 aa13.53□□□□□ -0.24
SLC28A1-204ENST00000538177 E7EWF7 191 aa13.53□□□□□ -0.24
SLC28A1-204ENST00000538177 FIBPO43427 364 aa13.53□□□□□ -0.24
SLC28A1-204ENST00000538177 PFKFB2O60825 505 aa13.53□□□□□ -0.24
SLC28A1-204ENST00000538177 CDC37L1Q7L3B6 337 aa13.53□□□□□ -0.24
SLC28A1-204ENST00000538177 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
SLC28A1-204ENST00000538177 APPBP2Q92624 585 aa13.53□□□□□ -0.24
SLC28A1-204ENST00000538177 BRF1Q92994 677 aa13.53□□□□□ -0.24
SLC28A1-204ENST00000538177 MYH3P11055 1940 aa13.53□□□□□ -0.24
SLC28A1-204ENST00000538177 PDE8BO95263 885 aa13.52□□□□□ -0.24
SLC28A1-204ENST00000538177 CCDC183Q5T5S1 534 aa13.52□□□□□ -0.24
SLC28A1-204ENST00000538177 TRIM44Q96DX7 344 aaPredicted RBP13.52□□□□□ -0.24
SLC28A1-204ENST00000538177 LLPHQ9BRT6 129 aaKnown RBP13.52□□□□□ -0.24
SLC28A1-204ENST00000538177 TSPY26PQ9H489 355 aa13.52□□□□□ -0.24
SLC28A1-204ENST00000538177 CTNNA3Q9UI47 895 aa13.52□□□□□ -0.24
SLC28A1-204ENST00000538177 LOC102724428A0A0B4J2F2 783 aa13.52□□□□□ -0.25
SLC28A1-204ENST00000538177 FOXP2O15409 715 aa13.52□□□□□ -0.25
SLC28A1-204ENST00000538177 MCAMP43121 646 aa13.52□□□□□ -0.25
SLC28A1-204ENST00000538177 CRKLP46109 303 aaKnown RBP13.52□□□□□ -0.25
SLC28A1-204ENST00000538177 SIK1P57059 783 aa13.52□□□□□ -0.25
SLC28A1-204ENST00000538177 BARGINQ6ZT62 677 aa13.52□□□□□ -0.25
SLC28A1-204ENST00000538177 FBXL16Q8N461 479 aa13.52□□□□□ -0.25
SLC28A1-204ENST00000538177 A0A0G2JLW4 131 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 JAK2O60674 1132 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 LETM1O95202 739 aaPredicted RBP13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 HSP90B1P14625 803 aaKnown RBP13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 ATP6V1AP38606 617 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 KRT85P78386 507 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 WASHC4Q2M389 1173 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 SUSD4Q5VX71 490 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 SMARCC2Q8TAQ2 1214 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 PDLIM2Q96JY6 352 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 LRRC2Q9BYS8 371 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 SLIT2O94813 1529 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 LAMA4Q16363 1823 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 CAMTA2O94983 1202 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 FGD1P98174 961 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 SCRN1Q12765 414 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 TTLL5Q6EMB2 1281 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 PI16Q6UXB8 463 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 ACSBG1Q96GR2 724 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 PHLPP1O60346 1717 aa13.51□□□□□ -0.25
SLC28A1-204ENST00000538177 ELP1O95163 1332 aa13.5□□□□□ -0.25
SLC28A1-204ENST00000538177 ESPNB1AK53 854 aa13.5□□□□□ -0.25
SLC28A1-204ENST00000538177 FGFR2P21802 821 aa13.5□□□□□ -0.25
SLC28A1-204ENST00000538177 TTF1Q15361 905 aaPredicted RBP13.5□□□□□ -0.25
SLC28A1-204ENST00000538177 PARP10Q53GL7 1025 aa13.5□□□□□ -0.25
SLC28A1-204ENST00000538177 ZSCAN25Q6NSZ9 544 aa13.5□□□□□ -0.25
SLC28A1-204ENST00000538177 FERMT3Q86UX7 667 aa13.5□□□□□ -0.25
SLC28A1-204ENST00000538177 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.5□□□□□ -0.25
SLC28A1-204ENST00000538177 PUS7LQ9H0K6 701 aaKnown RBP13.5□□□□□ -0.25
SLC28A1-204ENST00000538177 AKAP11Q9UKA4 1901 aa13.5□□□□□ -0.25
SLC28A1-204ENST00000538177 MROH5Q6ZUA9 1318 aa13.5□□□□□ -0.25
SLC28A1-204ENST00000538177 LRP5O75197 1615 aa13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 FGAP02671 866 aa13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 ARID4AP29374 1257 aaPredicted RBP13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 CLCN1P35523 988 aa13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 ITPK1Q13572 414 aa13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 LPIN2Q92539 896 aa13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 ZNF274Q96GC6 653 aaPredicted RBP13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 UTP14AQ9BVJ6 771 aaKnown RBP13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 RREB1Q92766 1687 aa13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 CICQ96RK0 1608 aaPredicted RBP13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 UQCRFS1P1P0C7P4 283 aa13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 ADD2P35612 726 aa13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 EVCP57679 992 aa13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 APOBRQ0VD83 1088 aa13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 PUM3Q15397 648 aaKnown RBP13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 IMMTQ16891 758 aaKnown RBP13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 CCDC102BQ68D86 513 aa13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 TTC6Q86TZ1 520 aa13.49□□□□□ -0.25
SLC28A1-204ENST00000538177 GPAA1O43292 621 aa13.48□□□□□ -0.25
SLC28A1-204ENST00000538177 NSUN7Q8NE18 718 aaKnown RBP13.48□□□□□ -0.25
SLC28A1-204ENST00000538177 SMARCC1Q92922 1105 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-204ENST00000538177 CHMP4CQ96CF2 233 aa13.48□□□□□ -0.25
SLC28A1-204ENST00000538177 SCAND2PQ9GZW5 306 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-204ENST00000538177 CTDNEP1O95476 244 aa13.48□□□□□ -0.25
SLC28A1-204ENST00000538177 HCLS1P14317 486 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-204ENST00000538177 PDIA3P30101 505 aaKnown RBP13.48□□□□□ -0.25
SLC28A1-204ENST00000538177 PHKA1P46020 1223 aa13.48□□□□□ -0.25
SLC28A1-204ENST00000538177 HMGN5P82970 282 aaKnown RBP13.48□□□□□ -0.25
SLC28A1-204ENST00000538177 RESTQ13127 1097 aa13.48□□□□□ -0.25
SLC28A1-204ENST00000538177 UBE3CQ15386 1083 aa13.48□□□□□ -0.25
SLC28A1-204ENST00000538177 HS1BP3Q53T59 392 aa13.48□□□□□ -0.25
SLC28A1-204ENST00000538177 PIH1D3Q9NQM4 214 aaKnown RBP13.48□□□□□ -0.25
SLC28A1-204ENST00000538177 ATRNO75882 1429 aa13.47□□□□□ -0.25
SLC28A1-204ENST00000538177 NUTM2BA6NNL0 878 aaPredicted RBP13.47□□□□□ -0.25
SLC28A1-204ENST00000538177 NUTM2EB1AL46 878 aaPredicted RBP13.47□□□□□ -0.25
SLC28A1-204ENST00000538177 FAM173BQ6P4H8 233 aa13.47□□□□□ -0.25
SLC28A1-204ENST00000538177 NUTM2AQ8IVF1 878 aaPredicted RBP13.47□□□□□ -0.25
SLC28A1-204ENST00000538177 FAM184AQ8NB25 1140 aa13.47□□□□□ -0.25
SLC28A1-204ENST00000538177 ZSCAN16Q9H4T2 348 aaPredicted RBP13.47□□□□□ -0.25
SLC28A1-204ENST00000538177 NWD2Q9ULI1 1742 aa13.47□□□□□ -0.25
SLC28A1-204ENST00000538177 RTL9Q8NET4 1388 aa13.47□□□□□ -0.25
SLC28A1-204ENST00000538177 MYH7P12883 1935 aa13.47□□□□□ -0.25
SLC28A1-204ENST00000538177 A0A0G2JS52 829 aa13.47□□□□□ -0.25
SLC28A1-204ENST00000538177 SLC9C2Q5TAH2 1124 aa13.47□□□□□ -0.25
SLC28A1-204ENST00000538177 NAA16Q6N069 864 aaPredicted RBP13.47□□□□□ -0.25
SLC28A1-204ENST00000538177 DDX11Q96FC9 970 aa13.47□□□□□ -0.25
SLC28A1-204ENST00000538177 KIF3AQ9Y496 699 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms