RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 PHF14O94880 888 aa18.58■□□□□ 0.57
MKS1-204ENST00000537529 FGD1P98174 961 aa18.58■□□□□ 0.57
MKS1-204ENST00000537529 SCARF1Q14162 830 aa18.58■□□□□ 0.57
MKS1-204ENST00000537529 LRSAM1Q6UWE0 723 aa18.58■□□□□ 0.57
MKS1-204ENST00000537529 DHX32Q7L7V1 743 aaKnown RBP18.58■□□□□ 0.57
MKS1-204ENST00000537529 GTF3C6Q969F1 213 aa18.58■□□□□ 0.57
MKS1-204ENST00000537529 OSBP2Q969R2 916 aa18.58■□□□□ 0.57
MKS1-204ENST00000537529 KAT6BQ8WYB5 2073 aa18.58■□□□□ 0.56
MKS1-204ENST00000537529 TOM1O60784 492 aa18.58■□□□□ 0.56
MKS1-204ENST00000537529 STK3Q13188 491 aa18.58■□□□□ 0.56
MKS1-204ENST00000537529 WASHC4Q2M389 1173 aa18.58■□□□□ 0.56
MKS1-204ENST00000537529 PARP10Q53GL7 1025 aa18.58■□□□□ 0.56
MKS1-204ENST00000537529 APPBP2Q92624 585 aa18.58■□□□□ 0.56
MKS1-204ENST00000537529 UTP14AQ9BVJ6 771 aaKnown RBP18.58■□□□□ 0.56
MKS1-204ENST00000537529 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.58■□□□□ 0.561e-6■■■■■ 38.5
MKS1-204ENST00000537529 CTNNA3Q9UI47 895 aa18.58■□□□□ 0.56
MKS1-204ENST00000537529 MROH5Q6ZUA9 1318 aa18.57■□□□□ 0.56
MKS1-204ENST00000537529 GADD45BO75293 160 aaPredicted RBP18.57■□□□□ 0.56
MKS1-204ENST00000537529 PDE8BO95263 885 aa18.57■□□□□ 0.56
MKS1-204ENST00000537529 ZSCAN25Q6NSZ9 544 aa18.57■□□□□ 0.56
MKS1-204ENST00000537529 SYCE3A1L190 88 aa18.56■□□□□ 0.56
MKS1-204ENST00000537529 CAMTA2O94983 1202 aa18.56■□□□□ 0.56
MKS1-204ENST00000537529 UBE2HP62256 183 aa18.56■□□□□ 0.56
MKS1-204ENST00000537529 ITPK1Q13572 414 aa18.56■□□□□ 0.56
MKS1-204ENST00000537529 SUSD4Q5VX71 490 aa18.56■□□□□ 0.56
MKS1-204ENST00000537529 E7EWF7 191 aa18.56■□□□□ 0.56
MKS1-204ENST00000537529 PIP4K2BP78356 416 aa18.56■□□□□ 0.56
MKS1-204ENST00000537529 TTF1Q15361 905 aaPredicted RBP18.56■□□□□ 0.56
MKS1-204ENST00000537529 FIBPO43427 364 aa18.55■□□□□ 0.56
MKS1-204ENST00000537529 UQCRFS1P1P0C7P4 283 aa18.55■□□□□ 0.56
MKS1-204ENST00000537529 MCAMP43121 646 aa18.55■□□□□ 0.56
MKS1-204ENST00000537529 CCDC173Q0VFZ6 552 aa18.55■□□□□ 0.56
MKS1-204ENST00000537529 PUM3Q15397 648 aaKnown RBP18.55■□□□□ 0.56
MKS1-204ENST00000537529 BRF1Q92994 677 aa18.55■□□□□ 0.56
MKS1-204ENST00000537529 DTNBO60941 627 aa18.54■□□□□ 0.56
MKS1-204ENST00000537529 EXOSC10Q01780 885 aaKnown RBP18.54■□□□□ 0.56
MKS1-204ENST00000537529 DNM1Q05193 864 aaKnown RBP18.54■□□□□ 0.56
MKS1-204ENST00000537529 LPIN2Q92539 896 aa18.54■□□□□ 0.56
MKS1-204ENST00000537529 RBSNQ9H1K0 784 aa18.54■□□□□ 0.56
MKS1-204ENST00000537529 PFKFB2O60825 505 aa18.53■□□□□ 0.56
MKS1-204ENST00000537529 HCLS1P14317 486 aaPredicted RBP18.53■□□□□ 0.56
MKS1-204ENST00000537529 ARID4AP29374 1257 aaPredicted RBP18.53■□□□□ 0.56
MKS1-204ENST00000537529 IMMTQ16891 758 aaKnown RBP18.53■□□□□ 0.56
MKS1-204ENST00000537529 PI16Q6UXB8 463 aa18.53■□□□□ 0.56
MKS1-204ENST00000537529 CDC37L1Q7L3B6 337 aa18.53■□□□□ 0.56
MKS1-204ENST00000537529 LLPHQ9BRT6 129 aaKnown RBP18.53■□□□□ 0.56
MKS1-204ENST00000537529 ZNF652Q9Y2D9 606 aa18.53■□□□□ 0.56
MKS1-204ENST00000537529 LRRC2Q9BYS8 371 aa18.53■□□□□ 0.56
MKS1-204ENST00000537529 AGXT2Q9BYV1 514 aa18.53■□□□□ 0.56
MKS1-204ENST00000537529 ARAP2Q8WZ64 1704 aa18.53■□□□□ 0.56
MKS1-204ENST00000537529 RTL9Q8NET4 1388 aa18.52■□□□□ 0.56
MKS1-204ENST00000537529 ATRNO75882 1429 aa18.52■□□□□ 0.56
MKS1-204ENST00000537529 SLC5A1P13866 664 aa18.52■□□□□ 0.56
MKS1-204ENST00000537529 KRT85P78386 507 aa18.52■□□□□ 0.56
MKS1-204ENST00000537529 CCDC152Q4G0S7 254 aa18.52■□□□□ 0.56
MKS1-204ENST00000537529 CCDC183Q5T5S1 534 aa18.52■□□□□ 0.56
MKS1-204ENST00000537529 CCDC102BQ68D86 513 aa18.52■□□□□ 0.56
MKS1-204ENST00000537529 CHMP4CQ96CF2 233 aa18.52■□□□□ 0.56
MKS1-204ENST00000537529 LAMA4Q16363 1823 aa18.51■□□□□ 0.55
MKS1-204ENST00000537529 FAM177BA6PVY3 158 aa18.51■□□□□ 0.55
MKS1-204ENST00000537529 FGFR2P21802 821 aa18.51■□□□□ 0.55
MKS1-204ENST00000537529 TRIM44Q96DX7 344 aaPredicted RBP18.51■□□□□ 0.55
MKS1-204ENST00000537529 PPP1R9BQ96SB3 815 aa18.51■□□□□ 0.55
MKS1-204ENST00000537529 MPHOSPH8Q99549 860 aa18.51■□□□□ 0.55
MKS1-204ENST00000537529 TSPY26PQ9H489 355 aa18.51■□□□□ 0.55
MKS1-204ENST00000537529 NIP7Q9Y221 180 aaKnown RBP eCLIP18.51■□□□□ 0.55
MKS1-204ENST00000537529 ZNF831Q5JPB2 1677 aa18.51■□□□□ 0.55
MKS1-204ENST00000537529 GPAA1O43292 621 aa18.51■□□□□ 0.55
MKS1-204ENST00000537529 NTSR2O95665 410 aa18.51■□□□□ 0.55
MKS1-204ENST00000537529 ADD2P35612 726 aa18.51■□□□□ 0.55
MKS1-204ENST00000537529 TTLL5Q6EMB2 1281 aa18.51■□□□□ 0.55
MKS1-204ENST00000537529 PUS7LQ9H0K6 701 aaKnown RBP18.51■□□□□ 0.55
MKS1-204ENST00000537529 LAMB2P55268 1798 aa18.51■□□□□ 0.55
MKS1-204ENST00000537529 A0A0G2JLW4 131 aa18.5■□□□□ 0.55
MKS1-204ENST00000537529 FOXP2O15409 715 aa18.5■□□□□ 0.55
MKS1-204ENST00000537529 JAK2O60674 1132 aa18.5■□□□□ 0.55
MKS1-204ENST00000537529 LETM1O95202 739 aaPredicted RBP18.5■□□□□ 0.55
MKS1-204ENST00000537529 PHKA1P46020 1223 aa18.5■□□□□ 0.55
MKS1-204ENST00000537529 SCRN1Q12765 414 aa18.5■□□□□ 0.55
MKS1-204ENST00000537529 KIF3AQ9Y496 699 aa18.5■□□□□ 0.55
MKS1-204ENST00000537529 MYH7P12883 1935 aa18.5■□□□□ 0.55
MKS1-204ENST00000537529 COL5A3P25940 1745 aaPredicted RBP18.5■□□□□ 0.55
MKS1-204ENST00000537529 APOBRQ0VD83 1088 aa18.5■□□□□ 0.55
MKS1-204ENST00000537529 UBE3CQ15386 1083 aa18.5■□□□□ 0.55
MKS1-204ENST00000537529 SMARCC2Q8TAQ2 1214 aa18.5■□□□□ 0.55
MKS1-204ENST00000537529 PIH1D3Q9NQM4 214 aaKnown RBP18.5■□□□□ 0.55
MKS1-204ENST00000537529 KCNQ2O43526 872 aa18.49■□□□□ 0.55
MKS1-204ENST00000537529 FGAP02671 866 aa18.49■□□□□ 0.55
MKS1-204ENST00000537529 IGHMBP2P38935 993 aaKnown RBP18.49■□□□□ 0.55
MKS1-204ENST00000537529 HMGN5P82970 282 aaKnown RBP18.49■□□□□ 0.55
MKS1-204ENST00000537529 VPS72Q15906 364 aa18.49■□□□□ 0.55
MKS1-204ENST00000537529 FAM98CQ17RN3 349 aaKnown RBP18.49■□□□□ 0.55
MKS1-204ENST00000537529 SLC9C2Q5TAH2 1124 aa18.49■□□□□ 0.55
MKS1-204ENST00000537529 BCORQ6W2J9 1755 aa18.49■□□□□ 0.55
MKS1-204ENST00000537529 FERMT3Q86UX7 667 aa18.49■□□□□ 0.55
MKS1-204ENST00000537529 DDX60Q8IY21 1712 aaKnown RBP18.49■□□□□ 0.55
MKS1-204ENST00000537529 FBXL16Q8N461 479 aa18.49■□□□□ 0.55
MKS1-204ENST00000537529 FAM184AQ8NB25 1140 aa18.49■□□□□ 0.55
MKS1-204ENST00000537529 AKAP11Q9UKA4 1901 aa18.49■□□□□ 0.55
MKS1-204ENST00000537529 KLHL34Q8N239 644 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms