RNA–Protein interactions for RNA: ENST00000536437.5

KDM2B-205, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best) BASIC

Gene KDM2B, Length 2,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-205ENST00000536437 PHF8Q9UPP1 1060 aa17.17■□□□□ 0.34
KDM2B-205ENST00000536437 SMC2O95347 1197 aa17.16■□□□□ 0.34
KDM2B-205ENST00000536437 E4F1Q66K89 784 aaPredicted RBP17.16■□□□□ 0.34
KDM2B-205ENST00000536437 NAT10Q9H0A0 1025 aaKnown RBP17.16■□□□□ 0.34
KDM2B-205ENST00000536437 ZNF446Q9NWS9 450 aa17.16■□□□□ 0.34
KDM2B-205ENST00000536437 PCDHA7Q9UN72 937 aa17.16■□□□□ 0.34
KDM2B-205ENST00000536437 DPCR1Q3MIW9 517 aa17.16■□□□□ 0.34
KDM2B-205ENST00000536437 CHST3Q7LGC8 479 aa17.16■□□□□ 0.34
KDM2B-205ENST00000536437 FMR1NBQ8N0W7 255 aaPredicted RBP17.16■□□□□ 0.34
KDM2B-205ENST00000536437 XAGE3Q8WTP9 111 aa17.16■□□□□ 0.34
KDM2B-205ENST00000536437 OSBPL5Q9H0X9 879 aaPredicted RBP17.16■□□□□ 0.34
KDM2B-205ENST00000536437 PTPN12Q05209 780 aaKnown RBP17.15■□□□□ 0.34
KDM2B-205ENST00000536437 SLC39A6Q13433 755 aa17.15■□□□□ 0.34
KDM2B-205ENST00000536437 TMC6Q7Z403 805 aa17.15■□□□□ 0.34
KDM2B-205ENST00000536437 MRPS27Q92552 414 aaKnown RBP17.15■□□□□ 0.34
KDM2B-205ENST00000536437 PPP1R13BQ96KQ4 1090 aa17.15■□□□□ 0.34
KDM2B-205ENST00000536437 XPO4Q9C0E2 1151 aaKnown RBP17.15■□□□□ 0.34
KDM2B-205ENST00000536437 COPRSQ9NQ92 184 aa17.15■□□□□ 0.34
KDM2B-205ENST00000536437 FAM53CQ9NYF3 392 aa17.15■□□□□ 0.34
KDM2B-205ENST00000536437 ERCC6LQ2NKX8 1250 aa17.15■□□□□ 0.34
KDM2B-205ENST00000536437 ARMCX5Q6P1M9 558 aa17.15■□□□□ 0.34
KDM2B-205ENST00000536437 SYT10Q6XYQ8 523 aa17.15■□□□□ 0.34
KDM2B-205ENST00000536437 HAUS7Q99871 368 aa17.15■□□□□ 0.34
KDM2B-205ENST00000536437 KCND1Q9NSA2 647 aa17.15■□□□□ 0.34
KDM2B-205ENST00000536437 IFNKQ9P0W0 207 aa17.15■□□□□ 0.34
KDM2B-205ENST00000536437 RFX5P48382 616 aaPredicted RBP17.14■□□□□ 0.33
KDM2B-205ENST00000536437 NDUFA8P51970 172 aa17.14■□□□□ 0.33
KDM2B-205ENST00000536437 TAF3Q5VWG9 929 aa17.14■□□□□ 0.33
KDM2B-205ENST00000536437 OTUD7BQ6GQQ9 843 aa17.14■□□□□ 0.33
KDM2B-205ENST00000536437 FMNL2Q96PY5 1086 aa17.14■□□□□ 0.33
KDM2B-205ENST00000536437 SALL1Q9NSC2 1324 aa17.14■□□□□ 0.33
KDM2B-205ENST00000536437 KIF2AO00139 706 aaPredicted RBP17.13■□□□□ 0.33
KDM2B-205ENST00000536437 BIN1O00499 593 aa17.13■□□□□ 0.33
KDM2B-205ENST00000536437 HMGB1P09429 215 aaKnown RBP17.13■□□□□ 0.33
KDM2B-205ENST00000536437 PIP4K2AP48426 406 aaPredicted RBP17.13■□□□□ 0.33
KDM2B-205ENST00000536437 COPS6Q7L5N1 327 aa17.13■□□□□ 0.33
KDM2B-205ENST00000536437 RBM33Q96EV2 1170 aaKnown RBP17.13■□□□□ 0.33
KDM2B-205ENST00000536437 RFX7Q2KHR2 1363 aa17.13■□□□□ 0.33
KDM2B-205ENST00000536437 ATL3Q6DD88 541 aa17.13■□□□□ 0.33
KDM2B-205ENST00000536437 EXOSC10Q01780 885 aaKnown RBP17.12■□□□□ 0.33
KDM2B-205ENST00000536437 ZRSR1Q15695 479 aaKnown RBP17.12■□□□□ 0.33
KDM2B-205ENST00000536437 METTL22Q9BUU2 404 aaPredicted RBP17.12■□□□□ 0.33
KDM2B-205ENST00000536437 IMPACTQ9P2X3 320 aa17.12■□□□□ 0.33
KDM2B-205ENST00000536437 CARMIL3Q8ND23 1372 aa17.12■□□□□ 0.33
KDM2B-205ENST00000536437 ERICH4A6NGS2 130 aa17.12■□□□□ 0.33
KDM2B-205ENST00000536437 PDIA3P30101 505 aaKnown RBP17.12■□□□□ 0.33
KDM2B-205ENST00000536437 UBE3BQ7Z3V4 1068 aa17.12■□□□□ 0.33
KDM2B-205ENST00000536437 KBTBD3Q8NAB2 608 aa17.12■□□□□ 0.33
KDM2B-205ENST00000536437 L2HGDHQ9H9P8 463 aa17.12■□□□□ 0.33
KDM2B-205ENST00000536437 KIAA1468Q9P260 1216 aa17.12■□□□□ 0.33
KDM2B-205ENST00000536437 ARHGAP23Q9P227 1491 aa17.12■□□□□ 0.33
KDM2B-205ENST00000536437 GOLIM4O00461 696 aa17.11■□□□□ 0.33
KDM2B-205ENST00000536437 SFPQP23246 707 aaKnown RBP eCLIP17.11■□□□□ 0.33
KDM2B-205ENST00000536437 CCDC150Q8NCX0 1101 aa17.11■□□□□ 0.33
KDM2B-205ENST00000536437 CLIC4Q9Y696 253 aa17.11■□□□□ 0.33
KDM2B-205ENST00000536437 SH3TC1Q8TE82 1336 aa17.11■□□□□ 0.33
KDM2B-205ENST00000536437 ABCC6O95255 1503 aa17.11■□□□□ 0.33
KDM2B-205ENST00000536437 E7EWF7 191 aa17.11■□□□□ 0.33
KDM2B-205ENST00000536437 SF3A1Q15459 793 aaKnown RBP17.11■□□□□ 0.33
KDM2B-205ENST00000536437 ADALQ6DHV7 355 aa17.11■□□□□ 0.33
KDM2B-205ENST00000536437 FDPSP14324 419 aaKnown RBP17.11■□□□□ 0.33
KDM2B-205ENST00000536437 STK38Q15208 465 aa17.11■□□□□ 0.33
KDM2B-205ENST00000536437 GORABQ5T7V8 394 aa17.11■□□□□ 0.33
KDM2B-205ENST00000536437 RTEL1Q9NZ71 1219 aa17.11■□□□□ 0.33
KDM2B-205ENST00000536437 OVOS2A0A0G2JMS6 1433 aa17.1■□□□□ 0.33
KDM2B-205ENST00000536437 NEDD4P46934 1319 aa17.1■□□□□ 0.33
KDM2B-205ENST00000536437 POLR3DP05423 398 aaPredicted RBP17.1■□□□□ 0.33
KDM2B-205ENST00000536437 H2AFXP16104 143 aaPredicted RBP17.1■□□□□ 0.33
KDM2B-205ENST00000536437 PSME1Q06323 249 aa17.1■□□□□ 0.33
KDM2B-205ENST00000536437 KCNH5Q8NCM2 988 aa17.1■□□□□ 0.33
KDM2B-205ENST00000536437 AGXT2Q9BYV1 514 aa17.1■□□□□ 0.33
KDM2B-205ENST00000536437 GPHNQ9NQX3 736 aaPredicted RBP17.1■□□□□ 0.33
KDM2B-205ENST00000536437 LINC00301Q8NCQ3 95 aa17.1■□□□□ 0.33
KDM2B-205ENST00000536437 ANKRD24Q8TF21 1146 aa17.1■□□□□ 0.33
KDM2B-205ENST00000536437 SIPA1L3O60292 1781 aaPredicted RBP17.09■□□□□ 0.33
KDM2B-205ENST00000536437 PSDA5PKW4 1024 aaPredicted RBP17.09■□□□□ 0.33
KDM2B-205ENST00000536437 CCDC93Q567U6 631 aa17.09■□□□□ 0.33
KDM2B-205ENST00000536437 C5P01031 1676 aa17.09■□□□□ 0.33
KDM2B-205ENST00000536437 A0A1W2PQ27 194 aa17.09■□□□□ 0.33
KDM2B-205ENST00000536437 A0A1W2PQ64 194 aa17.09■□□□□ 0.33
KDM2B-205ENST00000536437 A0A1W2PQD8 194 aa17.09■□□□□ 0.33
KDM2B-205ENST00000536437 ATP5J2-PTCD1G3V325 749 aa17.09■□□□□ 0.33
KDM2B-205ENST00000536437 PTCD1O75127 700 aaKnown RBP17.09■□□□□ 0.33
KDM2B-205ENST00000536437 CLCN6P51797 869 aa17.09■□□□□ 0.33
KDM2B-205ENST00000536437 ISM2Q6H9L7 571 aa17.09■□□□□ 0.33
KDM2B-205ENST00000536437 ZNF790Q6PG37 636 aa17.09■□□□□ 0.33
KDM2B-205ENST00000536437 HOMER1Q86YM7 354 aa17.09■□□□□ 0.33
KDM2B-205ENST00000536437 NEUROD6Q96NK8 337 aa17.09■□□□□ 0.33
KDM2B-205ENST00000536437 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■■■□□ 19
KDM2B-205ENST00000536437 ZBTB22O15209 634 aa17.08■□□□□ 0.33
KDM2B-205ENST00000536437 HSPD1P10809 573 aaKnown RBP17.08■□□□□ 0.33
KDM2B-205ENST00000536437 TTLL5Q6EMB2 1281 aa17.08■□□□□ 0.33
KDM2B-205ENST00000536437 DSCC1Q9BVC3 393 aa17.08■□□□□ 0.33
KDM2B-205ENST00000536437 PAG1Q9NWQ8 432 aa17.08■□□□□ 0.33
KDM2B-205ENST00000536437 SLC3A2P08195 630 aaKnown RBP17.08■□□□□ 0.32
KDM2B-205ENST00000536437 LMOD1P29536 600 aaPredicted RBP17.08■□□□□ 0.32
KDM2B-205ENST00000536437 BMS1Q14692 1282 aaKnown RBP17.08■□□□□ 0.32
KDM2B-205ENST00000536437 ARHGAP29Q52LW3 1261 aa17.08■□□□□ 0.32
KDM2B-205ENST00000536437 ANKRD13DQ6ZTN6 518 aa17.08■□□□□ 0.32
KDM2B-205ENST00000536437 BPIFA3Q9BQP9 254 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms