RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 CDCA7LQ96GN5 454 aa18.1■□□□□ 0.49
RTN3P1-201ENST00000536295 TLL2Q9Y6L7 1015 aa18.1■□□□□ 0.49
RTN3P1-201ENST00000536295 KRT26Q7Z3Y9 468 aa18.09■□□□□ 0.49
RTN3P1-201ENST00000536295 HELBQ8NG08 1087 aaPredicted RBP18.09■□□□□ 0.49
RTN3P1-201ENST00000536295 DCPSQ96C86 337 aaKnown RBP18.09■□□□□ 0.49
RTN3P1-201ENST00000536295 CAPNS2Q96L46 248 aa18.09■□□□□ 0.49
RTN3P1-201ENST00000536295 ASTN2O75129 1339 aaPredicted RBP18.08■□□□□ 0.49
RTN3P1-201ENST00000536295 ADM5C9JUS6 153 aa18.08■□□□□ 0.48
RTN3P1-201ENST00000536295 FOXN1O15353 648 aa18.08■□□□□ 0.48
RTN3P1-201ENST00000536295 TAF5LO75529 589 aa18.08■□□□□ 0.48
RTN3P1-201ENST00000536295 CCDC57Q2TAC2 916 aa18.08■□□□□ 0.48
RTN3P1-201ENST00000536295 TAF7LQ5H9L4 462 aa18.08■□□□□ 0.48
RTN3P1-201ENST00000536295 SSH1Q8WYL5 1049 aa18.08■□□□□ 0.48
RTN3P1-201ENST00000536295 AIDAQ96BJ3 306 aa18.08■□□□□ 0.48
RTN3P1-201ENST00000536295 ZNF594Q96JF6 807 aaPredicted RBP18.08■□□□□ 0.48
RTN3P1-201ENST00000536295 MXD3Q9BW11 206 aa18.08■□□□□ 0.48
RTN3P1-201ENST00000536295 COA1Q9GZY4 146 aa18.08■□□□□ 0.48
RTN3P1-201ENST00000536295 GGA3Q9NZ52 723 aa18.08■□□□□ 0.48
RTN3P1-201ENST00000536295 CCER2I3L3R5 266 aa18.07■□□□□ 0.48
RTN3P1-201ENST00000536295 SNAP23O00161 211 aa18.07■□□□□ 0.48
RTN3P1-201ENST00000536295 USP17L8P0C7I0 530 aa18.07■□□□□ 0.48
RTN3P1-201ENST00000536295 ECE1P42892 770 aa18.07■□□□□ 0.48
RTN3P1-201ENST00000536295 ZNF280AP59817 542 aaPredicted RBP18.07■□□□□ 0.48
RTN3P1-201ENST00000536295 SAPCD2Q86UD0 394 aa18.07■□□□□ 0.48
RTN3P1-201ENST00000536295 GMLQ99445 158 aa18.07■□□□□ 0.48
RTN3P1-201ENST00000536295 NBPF7P0C2Y1 421 aaPredicted RBP18.06■□□□□ 0.48
RTN3P1-201ENST00000536295 SCARF1Q14162 830 aa18.06■□□□□ 0.48
RTN3P1-201ENST00000536295 DACT2Q5SW24 774 aa18.06■□□□□ 0.48
RTN3P1-201ENST00000536295 SUCLG2Q96I99 432 aa18.06■□□□□ 0.48
RTN3P1-201ENST00000536295 MYOZ2Q9NPC6 264 aa18.06■□□□□ 0.48
RTN3P1-201ENST00000536295 PSME4Q14997 1843 aa18.06■□□□□ 0.48
RTN3P1-201ENST00000536295 ZNF609O15014 1411 aa18.06■□□□□ 0.48
RTN3P1-201ENST00000536295 PLIN1O60240 522 aa18.05■□□□□ 0.48
RTN3P1-201ENST00000536295 ANGEL2Q5VTE6 544 aaKnown RBP18.05■□□□□ 0.48
RTN3P1-201ENST00000536295 LDHAL6AQ6ZMR3 332 aa18.05■□□□□ 0.48
RTN3P1-201ENST00000536295 SULF1Q8IWU6 871 aa18.05■□□□□ 0.48
RTN3P1-201ENST00000536295 TNS4Q8IZW8 715 aa18.05■□□□□ 0.48
RTN3P1-201ENST00000536295 CNNM1Q9NRU3 951 aa18.05■□□□□ 0.48
RTN3P1-201ENST00000536295 WBP1LQ9NX94 342 aa18.05■□□□□ 0.48
RTN3P1-201ENST00000536295 PTPRCP08575 1304 aa18.04■□□□□ 0.48
RTN3P1-201ENST00000536295 AOC2O75106 756 aa18.04■□□□□ 0.48
RTN3P1-201ENST00000536295 MAP2K1Q02750 393 aaPredicted RBP18.04■□□□□ 0.48
RTN3P1-201ENST00000536295 STRIP1Q5VSL9 837 aa18.04■□□□□ 0.48
RTN3P1-201ENST00000536295 CTCFP49711 727 aaPredicted RBP18.03■□□□□ 0.48
RTN3P1-201ENST00000536295 GTF2IP78347 998 aa18.03■□□□□ 0.48
RTN3P1-201ENST00000536295 TTLL5Q6EMB2 1281 aa18.03■□□□□ 0.48
RTN3P1-201ENST00000536295 KAZALD1Q96I82 304 aa18.03■□□□□ 0.48
RTN3P1-201ENST00000536295 SMC4Q9NTJ3 1288 aa18.03■□□□□ 0.48
RTN3P1-201ENST00000536295 HUNKP57058 714 aa18.02■□□□□ 0.48
RTN3P1-201ENST00000536295 OGFOD1Q8N543 542 aa18.02■□□□□ 0.48
RTN3P1-201ENST00000536295 BICC1Q9H694 974 aaKnown RBP18.02■□□□□ 0.48
RTN3P1-201ENST00000536295 GBA2Q9HCG7 927 aaPredicted RBP18.02■□□□□ 0.48
RTN3P1-201ENST00000536295 CD209Q9NNX6 404 aa18.02■□□□□ 0.48
RTN3P1-201ENST00000536295 SCAF8Q9UPN6 1271 aaKnown RBP18.02■□□□□ 0.48
RTN3P1-201ENST00000536295 POLR2AP24928 1970 aaKnown RBP18.02■□□□□ 0.47
RTN3P1-201ENST00000536295 MYO3BQ8WXR4 1341 aa18.01■□□□□ 0.47
RTN3P1-201ENST00000536295 ALDH1L2Q3SY69 923 aa18.01■□□□□ 0.47
RTN3P1-201ENST00000536295 C2orf69Q8N8R5 385 aa18.01■□□□□ 0.47
RTN3P1-201ENST00000536295 CDCA5Q96FF9 252 aa18.01■□□□□ 0.47
RTN3P1-201ENST00000536295 UTYO14607 1347 aa18■□□□□ 0.47
RTN3P1-201ENST00000536295 IRS2Q9Y4H2 1338 aa18■□□□□ 0.47
RTN3P1-201ENST00000536295 A0A1B0GUL6 1792 aa18■□□□□ 0.47
RTN3P1-201ENST00000536295 LBX1P52954 281 aa18■□□□□ 0.47
RTN3P1-201ENST00000536295 NBPF9Q3BBW0 867 aa18■□□□□ 0.47
RTN3P1-201ENST00000536295 ZNF804AQ7Z570 1209 aa18■□□□□ 0.47
RTN3P1-201ENST00000536295 KIAA0825Q8IV33 1275 aa18■□□□□ 0.47
RTN3P1-201ENST00000536295 TRMT2AQ8IZ69 625 aaKnown RBP18■□□□□ 0.47
RTN3P1-201ENST00000536295 HHIPL1Q96JK4 782 aa18■□□□□ 0.47
RTN3P1-201ENST00000536295 BEGAINQ9BUH8 593 aa18■□□□□ 0.47
RTN3P1-201ENST00000536295 PUS3Q9BZE2 481 aaKnown RBP18■□□□□ 0.47
RTN3P1-201ENST00000536295 ZNF646O15015 1829 aaPredicted RBP18■□□□□ 0.47
RTN3P1-201ENST00000536295 THSD7BQ9C0I4 1608 aa17.99■□□□□ 0.47
RTN3P1-201ENST00000536295 CAPN15O75808 1086 aa17.99■□□□□ 0.47
RTN3P1-201ENST00000536295 C15orf52Q6ZUT6 534 aaKnown RBP17.99■□□□□ 0.47
RTN3P1-201ENST00000536295 SASH1O94885 1247 aa17.98■□□□□ 0.47
RTN3P1-201ENST00000536295 HSPA8P11142 646 aaKnown RBP17.98■□□□□ 0.47
RTN3P1-201ENST00000536295 MAP2K2P36507 400 aa17.98■□□□□ 0.47
RTN3P1-201ENST00000536295 ANKRD44Q8N8A2 993 aa17.98■□□□□ 0.47
RTN3P1-201ENST00000536295 PRDM10Q9NQV6 1147 aa17.98■□□□□ 0.47
RTN3P1-201ENST00000536295 HDAC9Q9UKV0 1011 aa17.98■□□□□ 0.47
RTN3P1-201ENST00000536295 JAG2Q9Y219 1238 aa17.98■□□□□ 0.47
RTN3P1-201ENST00000536295 WNT10BO00744 389 aa17.97■□□□□ 0.47
RTN3P1-201ENST00000536295 RABL6Q3YEC7 729 aaPredicted RBP17.97■□□□□ 0.47
RTN3P1-201ENST00000536295 USP44Q9H0E7 712 aa17.97■□□□□ 0.47
RTN3P1-201ENST00000536295 PITPNM2Q9BZ72 1349 aa17.97■□□□□ 0.47
RTN3P1-201ENST00000536295 F8W031 263 aaPredicted RBP17.96■□□□□ 0.47
RTN3P1-201ENST00000536295 IL1R1P14778 569 aa17.96■□□□□ 0.47
RTN3P1-201ENST00000536295 PRAMEF18Q5VWM3 479 aa17.96■□□□□ 0.47
RTN3P1-201ENST00000536295 RGMBQ6NW40 437 aa17.96■□□□□ 0.47
RTN3P1-201ENST00000536295 CERS5Q8N5B7 392 aa17.96■□□□□ 0.47
RTN3P1-201ENST00000536295 TSKSQ9UJT2 592 aa17.96■□□□□ 0.47
RTN3P1-201ENST00000536295 NOB1Q9ULX3 412 aaKnown RBP17.96■□□□□ 0.47
RTN3P1-201ENST00000536295 CT47B1P0C2W7 299 aaPredicted RBP17.95■□□□□ 0.46
RTN3P1-201ENST00000536295 GYG1P46976 350 aa17.95■□□□□ 0.46
RTN3P1-201ENST00000536295 ZNF157P51786 506 aaPredicted RBP17.95■□□□□ 0.46
RTN3P1-201ENST00000536295 LRRC24Q50LG9 513 aa17.95■□□□□ 0.46
RTN3P1-201ENST00000536295 KLHDC4Q8TBB5 520 aa17.95■□□□□ 0.46
RTN3P1-201ENST00000536295 ZIC5Q96T25 663 aa17.95■□□□□ 0.46
RTN3P1-201ENST00000536295 RIPOR2Q9Y4F9 1068 aa17.95■□□□□ 0.46
RTN3P1-201ENST00000536295 MROH5Q6ZUA9 1318 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms