RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 USP50Q70EL3 339 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-205ENST00000536255 PODNQ7Z5L7 613 aa16.88■□□□□ 0.29
RPAIN-205ENST00000536255 HELBQ8NG08 1087 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-205ENST00000536255 ADARB2Q9NS39 739 aaKnown RBP16.88■□□□□ 0.29
RPAIN-205ENST00000536255 COG6Q9Y2V7 657 aa16.88■□□□□ 0.29
RPAIN-205ENST00000536255 ZBTB12Q9Y330 459 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-205ENST00000536255 RPS12P25398 132 aaKnown RBP16.87■□□□□ 0.29
RPAIN-205ENST00000536255 KLRK1P26718 216 aa16.87■□□□□ 0.29
RPAIN-205ENST00000536255 TXNRD3Q86VQ6 643 aa16.87■□□□□ 0.29
RPAIN-205ENST00000536255 DPF2Q92785 391 aa16.87■□□□□ 0.29
RPAIN-205ENST00000536255 COA1Q9GZY4 146 aa16.87■□□□□ 0.29
RPAIN-205ENST00000536255 CLEC11AQ9Y240 323 aa16.87■□□□□ 0.29
RPAIN-205ENST00000536255 A0A1B0GUL6 1792 aa16.87■□□□□ 0.29
RPAIN-205ENST00000536255 CEP350Q5VT06 3117 aa16.86■□□□□ 0.29
RPAIN-205ENST00000536255 SCN9AQ15858 1988 aa16.86■□□□□ 0.29
RPAIN-205ENST00000536255 SNAP23O00161 211 aa16.86■□□□□ 0.29
RPAIN-205ENST00000536255 VIL1P09327 827 aaKnown RBP16.86■□□□□ 0.29
RPAIN-205ENST00000536255 PUS3Q9BZE2 481 aaKnown RBP16.86■□□□□ 0.29
RPAIN-205ENST00000536255 CNOT7Q9UIV1 285 aaKnown RBP16.86■□□□□ 0.29
RPAIN-205ENST00000536255 MTX1Q13505 466 aa16.85■□□□□ 0.29
RPAIN-205ENST00000536255 C15orf52Q6ZUT6 534 aaKnown RBP16.85■□□□□ 0.29
RPAIN-205ENST00000536255 MICALL2Q8IY33 904 aa16.85■□□□□ 0.29
RPAIN-205ENST00000536255 RIPOR2Q9Y4F9 1068 aa16.85■□□□□ 0.29
RPAIN-205ENST00000536255 IRS2Q9Y4H2 1338 aa16.85■□□□□ 0.29
RPAIN-205ENST00000536255 ZNF609O15014 1411 aa16.85■□□□□ 0.29
RPAIN-205ENST00000536255 SHTN1A0MZ66 631 aa16.84■□□□□ 0.29
RPAIN-205ENST00000536255 USP17L3A6NCW0 530 aa16.84■□□□□ 0.29
RPAIN-205ENST00000536255 USP17L4A6NCW7 530 aa16.84■□□□□ 0.29
RPAIN-205ENST00000536255 H7C1D1 291 aa16.84■□□□□ 0.29
RPAIN-205ENST00000536255 SRGAP3O43295 1099 aa16.84■□□□□ 0.29
RPAIN-205ENST00000536255 C20orf194Q5TEA3 1177 aa16.84■□□□□ 0.29
RPAIN-205ENST00000536255 MAP1SQ66K74 1059 aaPredicted RBP16.84■□□□□ 0.29
RPAIN-205ENST00000536255 RSBN1LQ6PCB5 846 aaPredicted RBP16.84■□□□□ 0.29
RPAIN-205ENST00000536255 USP17L1Q7RTZ2 530 aa16.84■□□□□ 0.29
RPAIN-205ENST00000536255 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
RPAIN-205ENST00000536255 MROH5Q6ZUA9 1318 aa16.84■□□□□ 0.29
RPAIN-205ENST00000536255 RFX5P48382 616 aaPredicted RBP16.83■□□□□ 0.28
RPAIN-205ENST00000536255 LRRC24Q50LG9 513 aa16.83■□□□□ 0.28
RPAIN-205ENST00000536255 AGBL3Q8NEM8 1001 aa16.83■□□□□ 0.28
RPAIN-205ENST00000536255 FBXO3Q9UK99 471 aa16.83■□□□□ 0.28
RPAIN-205ENST00000536255 PSME4Q14997 1843 aa16.82■□□□□ 0.28
RPAIN-205ENST00000536255 PASKQ96RG2 1323 aa16.82■□□□□ 0.28
RPAIN-205ENST00000536255 ITGBL1O95965 494 aaPredicted RBP16.82■□□□□ 0.28
RPAIN-205ENST00000536255 UBE4AQ14139 1066 aa16.82■□□□□ 0.28
RPAIN-205ENST00000536255 METTL24Q5JXM2 366 aa16.82■□□□□ 0.28
RPAIN-205ENST00000536255 ZNF804AQ7Z570 1209 aa16.82■□□□□ 0.28
RPAIN-205ENST00000536255 CNTROBQ8N137 903 aa16.82■□□□□ 0.28
RPAIN-205ENST00000536255 TRPM4Q8TD43 1214 aa16.82■□□□□ 0.28
RPAIN-205ENST00000536255 HIRAP54198 1017 aaPredicted RBP16.81■□□□□ 0.28
RPAIN-205ENST00000536255 HTRA3P83110 453 aa16.81■□□□□ 0.28
RPAIN-205ENST00000536255 PTPN12Q05209 780 aaKnown RBP16.81■□□□□ 0.28
RPAIN-205ENST00000536255 DACT2Q5SW24 774 aa16.81■□□□□ 0.28
RPAIN-205ENST00000536255 STRIP1Q5VSL9 837 aa16.81■□□□□ 0.28
RPAIN-205ENST00000536255 GMLQ99445 158 aa16.81■□□□□ 0.28
RPAIN-205ENST00000536255 C1orf115Q9H7X2 142 aa16.81■□□□□ 0.28
RPAIN-205ENST00000536255 CD209Q9NNX6 404 aa16.81■□□□□ 0.28
RPAIN-205ENST00000536255 COPRSQ9NQ92 184 aa16.81■□□□□ 0.28
RPAIN-205ENST00000536255 ZBTB40Q9NUA8 1239 aa16.81■□□□□ 0.28
RPAIN-205ENST00000536255 EYA2O00167 538 aa16.8■□□□□ 0.28
RPAIN-205ENST00000536255 ATP8B2P98198 1209 aa16.8■□□□□ 0.28
RPAIN-205ENST00000536255 TBC1D10BQ4KMP7 808 aaPredicted RBP16.8■□□□□ 0.28
RPAIN-205ENST00000536255 SAMD7Q7Z3H4 446 aa16.8■□□□□ 0.28
RPAIN-205ENST00000536255 VGLL2Q8N8G2 317 aa16.8■□□□□ 0.28
RPAIN-205ENST00000536255 ZC3H15Q8WU90 426 aaKnown RBP16.8■□□□□ 0.28
RPAIN-205ENST00000536255 FBXW7Q969H0 707 aa16.8■□□□□ 0.28
RPAIN-205ENST00000536255 MYO3BQ8WXR4 1341 aa16.79■□□□□ 0.28
RPAIN-205ENST00000536255 CIAO1O76071 339 aa16.79■□□□□ 0.28
RPAIN-205ENST00000536255 PDE8BO95263 885 aa16.79■□□□□ 0.28
RPAIN-205ENST00000536255 EGFRP00533 1210 aa16.79■□□□□ 0.28
RPAIN-205ENST00000536255 USP17L8P0C7I0 530 aa16.79■□□□□ 0.28
RPAIN-205ENST00000536255 IL1R1P14778 569 aa16.79■□□□□ 0.28
RPAIN-205ENST00000536255 ZNF280AP59817 542 aaPredicted RBP16.79■□□□□ 0.28
RPAIN-205ENST00000536255 TTLL5Q6EMB2 1281 aa16.79■□□□□ 0.28
RPAIN-205ENST00000536255 PGAP2Q9UHJ9 254 aa16.79■□□□□ 0.28
RPAIN-205ENST00000536255 SUPT16HQ9Y5B9 1047 aaKnown RBP16.79■□□□□ 0.28
RPAIN-205ENST00000536255 ZNF646O15015 1829 aaPredicted RBP16.78■□□□□ 0.28
RPAIN-205ENST00000536255 PNMA6EA0A0J9YXQ4 647 aa16.78■□□□□ 0.28
RPAIN-205ENST00000536255 IL15P40933 162 aaPredicted RBP16.78■□□□□ 0.28
RPAIN-205ENST00000536255 GTF2IP78347 998 aa16.78■□□□□ 0.28
RPAIN-205ENST00000536255 KIF4BQ2VIQ3 1234 aa16.78■□□□□ 0.28
RPAIN-205ENST00000536255 CEP85Q6P2H3 762 aa16.78■□□□□ 0.28
RPAIN-205ENST00000536255 ATG9AQ7Z3C6 839 aa16.78■□□□□ 0.28
RPAIN-205ENST00000536255 RPAP2Q8IXW5 612 aaPredicted RBP16.78■□□□□ 0.28
RPAIN-205ENST00000536255 SSH3Q8TE77 659 aa16.78■□□□□ 0.28
RPAIN-205ENST00000536255 MXD3Q9BW11 206 aa16.78■□□□□ 0.28
RPAIN-205ENST00000536255 SIL1Q9H173 461 aa16.78■□□□□ 0.28
RPAIN-205ENST00000536255 HMMRO75330 724 aa16.77■□□□□ 0.28
RPAIN-205ENST00000536255 GYG1P46976 350 aa16.77■□□□□ 0.28
RPAIN-205ENST00000536255 POLA2Q14181 598 aa16.77■□□□□ 0.28
RPAIN-205ENST00000536255 PUM3Q15397 648 aaKnown RBP16.77■□□□□ 0.28
RPAIN-205ENST00000536255 RBM26Q5T8P6 1007 aaKnown RBP16.77■□□□□ 0.28
RPAIN-205ENST00000536255 DNAJC5GQ8N7S2 189 aa16.77■□□□□ 0.28
RPAIN-205ENST00000536255 CREBZFQ9NS37 354 aa16.77■□□□□ 0.28
RPAIN-205ENST00000536255 PA2G4Q9UQ80 394 aaKnown RBP16.77■□□□□ 0.28
RPAIN-205ENST00000536255 HIBADHP31937 336 aaKnown RBP16.76■□□□□ 0.27
RPAIN-205ENST00000536255 G3BP1Q13283 466 aaKnown RBP eCLIP16.76■□□□□ 0.27
RPAIN-205ENST00000536255 FAM84BQ96KN1 310 aaPredicted RBP16.76■□□□□ 0.27
RPAIN-205ENST00000536255 MYOZ2Q9NPC6 264 aa16.76■□□□□ 0.27
RPAIN-205ENST00000536255 CEP126Q9P2H0 1117 aa16.76■□□□□ 0.27
RPAIN-205ENST00000536255 TMEM88BA6NKF7 163 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms