RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 CCDC158Q5M9N0 1113 aa14.1□□□□□ -0.15
CDCA3-206ENST00000536241 DPP8Q6V1X1 898 aaPredicted RBP14.1□□□□□ -0.15
CDCA3-206ENST00000536241 TXNRD3Q86VQ6 643 aa14.1□□□□□ -0.15
CDCA3-206ENST00000536241 TBC1D16Q8TBP0 767 aa14.1□□□□□ -0.15
CDCA3-206ENST00000536241 GPR101Q96P66 508 aaPredicted RBP14.1□□□□□ -0.15
CDCA3-206ENST00000536241 BCS1LQ9Y276 419 aa14.1□□□□□ -0.15
CDCA3-206ENST00000536241 TTC41PQ6P2S7 1318 aa14.09□□□□□ -0.15
CDCA3-206ENST00000536241 GYG1P46976 350 aa14.09□□□□□ -0.15
CDCA3-206ENST00000536241 CCDC102BQ68D86 513 aa14.09□□□□□ -0.15
CDCA3-206ENST00000536241 CC2D2BQ6DHV5 1058 aa14.09□□□□□ -0.15
CDCA3-206ENST00000536241 PI4K2BQ8TCG2 481 aa14.09□□□□□ -0.15
CDCA3-206ENST00000536241 GPATCH3Q96I76 525 aa14.09□□□□□ -0.15
CDCA3-206ENST00000536241 FAM84BQ96KN1 310 aaPredicted RBP14.09□□□□□ -0.15
CDCA3-206ENST00000536241 BOLA2Q9H3K6 86 aa14.09□□□□□ -0.15
CDCA3-206ENST00000536241 KIAA1551Q9HCM1 1747 aa14.09□□□□□ -0.15
CDCA3-206ENST00000536241 ATP5JP18859 108 aa14.08□□□□□ -0.16
CDCA3-206ENST00000536241 PHKA1P46020 1223 aa14.08□□□□□ -0.16
CDCA3-206ENST00000536241 CAVIN4Q5BKX8 364 aa14.08□□□□□ -0.16
CDCA3-206ENST00000536241 TTC39AQ5SRH9 613 aa14.08□□□□□ -0.16
CDCA3-206ENST00000536241 FBXO33Q7Z6M2 555 aa14.08□□□□□ -0.16
CDCA3-206ENST00000536241 DLEC1Q9Y238 1755 aa14.08□□□□□ -0.16
CDCA3-206ENST00000536241 RIMBP2O15034 1052 aa14.07□□□□□ -0.16
CDCA3-206ENST00000536241 ERC2O15083 957 aa14.07□□□□□ -0.16
CDCA3-206ENST00000536241 TTC22Q5TAA0 569 aa14.07□□□□□ -0.16
CDCA3-206ENST00000536241 IRS2Q9Y4H2 1338 aa14.07□□□□□ -0.16
CDCA3-206ENST00000536241 GLRX3O76003 335 aaKnown RBP14.06□□□□□ -0.16
CDCA3-206ENST00000536241 MAP4K4O95819 1239 aaPredicted RBP14.06□□□□□ -0.16
CDCA3-206ENST00000536241 GSPT1P15170 499 aaKnown RBP14.06□□□□□ -0.16
CDCA3-206ENST00000536241 HIBADHP31937 336 aaKnown RBP14.06□□□□□ -0.16
CDCA3-206ENST00000536241 WASHC4Q2M389 1173 aa14.06□□□□□ -0.16
CDCA3-206ENST00000536241 CCDC93Q567U6 631 aa14.06□□□□□ -0.16
CDCA3-206ENST00000536241 C15orf52Q6ZUT6 534 aaKnown RBP14.06□□□□□ -0.16
CDCA3-206ENST00000536241 VPS37DQ86XT2 251 aa14.06□□□□□ -0.16
CDCA3-206ENST00000536241 RTKN2Q8IZC4 609 aa14.06□□□□□ -0.16
CDCA3-206ENST00000536241 ZC3H12CQ9C0D7 883 aaKnown RBP14.06□□□□□ -0.16
CDCA3-206ENST00000536241 A0A1B0GUL6 1792 aa14.06□□□□□ -0.16
CDCA3-206ENST00000536241 AOX1Q06278 1338 aa14.06□□□□□ -0.16
CDCA3-206ENST00000536241 SCARF1Q14162 830 aa14.06□□□□□ -0.16
CDCA3-206ENST00000536241 GRIPAP1Q4V328 841 aa14.06□□□□□ -0.16
CDCA3-206ENST00000536241 ZNF512BQ96KM6 892 aaPredicted RBP14.06□□□□□ -0.16
CDCA3-206ENST00000536241 RTFDC1Q9BY42 306 aaPredicted RBP14.06□□□□□ -0.16
CDCA3-206ENST00000536241 SNRKQ9NRH2 765 aa14.06□□□□□ -0.16
CDCA3-206ENST00000536241 IQSEC3Q9UPP2 1182 aaPredicted RBP14.06□□□□□ -0.16
CDCA3-206ENST00000536241 NDUFB9Q9Y6M9 179 aa14.06□□□□□ -0.16
CDCA3-206ENST00000536241 LRRC37AA6NMS7 1700 aa14.05□□□□□ -0.16
CDCA3-206ENST00000536241 TRIM6-TRIM34B2RNG4 842 aa14.05□□□□□ -0.16
CDCA3-206ENST00000536241 UQCRFS1P1P0C7P4 283 aa14.05□□□□□ -0.16
CDCA3-206ENST00000536241 MCAMP43121 646 aa14.05□□□□□ -0.16
CDCA3-206ENST00000536241 SOGA3Q5TF21 947 aa14.05□□□□□ -0.16
CDCA3-206ENST00000536241 EYA3Q99504 573 aa14.05□□□□□ -0.16
CDCA3-206ENST00000536241 GNL3LQ9NVN8 582 aaKnown RBP14.05□□□□□ -0.16
CDCA3-206ENST00000536241 SDSP20132 328 aa14.04□□□□□ -0.16
CDCA3-206ENST00000536241 ARID4AP29374 1257 aaPredicted RBP14.04□□□□□ -0.16
CDCA3-206ENST00000536241 FKBP4Q02790 459 aaKnown RBP eCLIP14.04□□□□□ -0.16
CDCA3-206ENST00000536241 BMP2KLQ5H9B9 411 aa14.04□□□□□ -0.16
CDCA3-206ENST00000536241 PI16Q6UXB8 463 aa14.04□□□□□ -0.16
CDCA3-206ENST00000536241 SUPT20HQ8NEM7 779 aa14.04□□□□□ -0.16
CDCA3-206ENST00000536241 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.04□□□□□ -0.16
CDCA3-206ENST00000536241 RILPL2Q969X0 211 aa14.04□□□□□ -0.16
CDCA3-206ENST00000536241 EDC3Q96F86 508 aaKnown RBP14.04□□□□□ -0.16
CDCA3-206ENST00000536241 DNAJC2Q99543 621 aaKnown RBP14.04□□□□□ -0.16
CDCA3-206ENST00000536241 HAUS7Q99871 368 aa14.04□□□□□ -0.16
CDCA3-206ENST00000536241 CD209Q9NNX6 404 aa14.04□□□□□ -0.16
CDCA3-206ENST00000536241 BRCA1P38398 1863 aaKnown RBP14.04□□□□□ -0.16
CDCA3-206ENST00000536241 FRAT2O75474 233 aaPredicted RBP14.03□□□□□ -0.16
CDCA3-206ENST00000536241 ZAP70P43403 619 aa14.03□□□□□ -0.16
CDCA3-206ENST00000536241 RASGRF1Q13972 1273 aa14.03□□□□□ -0.16
CDCA3-206ENST00000536241 DOK7Q18PE1 504 aa14.03□□□□□ -0.16
CDCA3-206ENST00000536241 ZNF804AQ7Z570 1209 aa14.03□□□□□ -0.16
CDCA3-206ENST00000536241 PSMD1Q99460 953 aa14.03□□□□□ -0.16
CDCA3-206ENST00000536241 HMG20BQ9P0W2 317 aa14.03□□□□□ -0.16
CDCA3-206ENST00000536241 SNED1Q8TER0 1413 aa14.02□□□□□ -0.16
CDCA3-206ENST00000536241 G3V3G9 751 aa14.02□□□□□ -0.16
CDCA3-206ENST00000536241 AOC3Q16853 763 aa14.02□□□□□ -0.16
CDCA3-206ENST00000536241 DCAF8Q5TAQ9 597 aa14.02□□□□□ -0.16
CDCA3-206ENST00000536241 PELP1Q8IZL8 1130 aaKnown RBP14.02□□□□□ -0.16
CDCA3-206ENST00000536241 SPATA5Q8NB90 893 aa14.02□□□□□ -0.16
CDCA3-206ENST00000536241 TDRD7Q8NHU6 1098 aaKnown RBP14.02□□□□□ -0.16
CDCA3-206ENST00000536241 ANTXR1Q9H6X2 564 aa14.02□□□□□ -0.16
CDCA3-206ENST00000536241 MED23Q9ULK4 1368 aa14.02□□□□□ -0.17
CDCA3-206ENST00000536241 LTBP1Q14766 1721 aa14.02□□□□□ -0.17
CDCA3-206ENST00000536241 GOLIM4O00461 696 aa14.01□□□□□ -0.17
CDCA3-206ENST00000536241 COA1Q9GZY4 146 aa14.01□□□□□ -0.17
CDCA3-206ENST00000536241 ZNF277Q9NRM2 450 aaPredicted RBP14.01□□□□□ -0.17
CDCA3-206ENST00000536241 PAG1Q9NWQ8 432 aa14.01□□□□□ -0.17
CDCA3-206ENST00000536241 DENND2AQ9ULE3 1009 aa14.01□□□□□ -0.17
CDCA3-206ENST00000536241 DUOX1Q9NRD9 1551 aa14.01□□□□□ -0.17
CDCA3-206ENST00000536241 NFKBIEO00221 500 aa14□□□□□ -0.17
CDCA3-206ENST00000536241 PPIP5K2O43314 1243 aa14□□□□□ -0.17
CDCA3-206ENST00000536241 CYP2E1P05181 493 aaPredicted RBP14□□□□□ -0.17
CDCA3-206ENST00000536241 IL1R1P14778 569 aa14□□□□□ -0.17
CDCA3-206ENST00000536241 KIAA2012Q0VF49 1180 aa14□□□□□ -0.17
CDCA3-206ENST00000536241 TBC1D9Q6ZT07 1266 aa14□□□□□ -0.17
CDCA3-206ENST00000536241 ARHGAP27Q6ZUM4 889 aa14□□□□□ -0.17
CDCA3-206ENST00000536241 CNTROBQ8N137 903 aa14□□□□□ -0.17
CDCA3-206ENST00000536241 EVI5LQ96CN4 794 aa14□□□□□ -0.17
CDCA3-206ENST00000536241 DBNDD1Q9H9R9 158 aa14□□□□□ -0.17
CDCA3-206ENST00000536241 ARAP2Q8WZ64 1704 aa14□□□□□ -0.17
CDCA3-206ENST00000536241 YBX3P16989 372 aaKnown RBP eCLIP13.99□□□□□ -0.17
CDCA3-206ENST00000536241 CHAF1AQ13111 956 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms