RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 CSF1RP07333 972 aa15.9■□□□□ 0.14
DDB1-207ENST00000535967 GNAI3P08754 354 aa15.9■□□□□ 0.14
DDB1-207ENST00000535967 UBTFL1P0CB47 393 aaPredicted RBP15.9■□□□□ 0.14
DDB1-207ENST00000535967 CHRM1P11229 460 aaPredicted RBP15.9■□□□□ 0.14
DDB1-207ENST00000535967 LMOD1P29536 600 aaPredicted RBP15.9■□□□□ 0.14
DDB1-207ENST00000535967 FOXO4P98177 505 aa15.9■□□□□ 0.14
DDB1-207ENST00000535967 GRM1Q13255 1194 aa15.9■□□□□ 0.14
DDB1-207ENST00000535967 AOC3Q16853 763 aa15.9■□□□□ 0.14
DDB1-207ENST00000535967 TMEM57Q8N5G2 664 aa15.9■□□□□ 0.14
DDB1-207ENST00000535967 RNF25Q96BH1 459 aaPredicted RBP15.9■□□□□ 0.14
DDB1-207ENST00000535967 KIF12Q96FN5 646 aa15.9■□□□□ 0.14
DDB1-207ENST00000535967 SUCLG2Q96I99 432 aa15.9■□□□□ 0.14
DDB1-207ENST00000535967 CAPNS2Q96L46 248 aa15.9■□□□□ 0.14
DDB1-207ENST00000535967 BBOX1O75936 387 aa15.89■□□□□ 0.13
DDB1-207ENST00000535967 MAP2K1Q02750 393 aaPredicted RBP15.89■□□□□ 0.13
DDB1-207ENST00000535967 GRIPAP1Q4V328 841 aa15.89■□□□□ 0.13
DDB1-207ENST00000535967 CDC5LQ99459 802 aaKnown RBP15.89■□□□□ 0.13
DDB1-207ENST00000535967 DUOX1Q9NRD9 1551 aa15.88■□□□□ 0.13
DDB1-207ENST00000535967 MAP3K13O43283 966 aa15.88■□□□□ 0.13
DDB1-207ENST00000535967 PPIP5K2O43314 1243 aa15.88■□□□□ 0.13
DDB1-207ENST00000535967 RLBP1P12271 317 aa15.88■□□□□ 0.13
DDB1-207ENST00000535967 PDE3AQ14432 1141 aa15.88■□□□□ 0.13
DDB1-207ENST00000535967 RABL6Q3YEC7 729 aaPredicted RBP15.88■□□□□ 0.13
DDB1-207ENST00000535967 PAXIP1Q6ZW49 1069 aaPredicted RBP15.88■□□□□ 0.13
DDB1-207ENST00000535967 NIM1KQ8IY84 436 aa15.88■□□□□ 0.13
DDB1-207ENST00000535967 GREM2Q9H772 168 aa15.88■□□□□ 0.13
DDB1-207ENST00000535967 TSKSQ9UJT2 592 aa15.88■□□□□ 0.13
DDB1-207ENST00000535967 CASP8AP2Q9UKL3 1982 aa15.88■□□□□ 0.13
DDB1-207ENST00000535967 AOC2O75106 756 aa15.87■□□□□ 0.13
DDB1-207ENST00000535967 CXCL9Q07325 125 aa15.87■□□□□ 0.13
DDB1-207ENST00000535967 FAM161AQ3B820 660 aa15.87■□□□□ 0.13
DDB1-207ENST00000535967 USP50Q70EL3 339 aaPredicted RBP15.87■□□□□ 0.13
DDB1-207ENST00000535967 ITPRIPQ8IWB1 547 aa15.87■□□□□ 0.13
DDB1-207ENST00000535967 KAZALD1Q96I82 304 aa15.87■□□□□ 0.13
DDB1-207ENST00000535967 MEIS3Q99687 375 aa15.87■□□□□ 0.13
DDB1-207ENST00000535967 TMX4Q9H1E5 349 aaPredicted RBP15.87■□□□□ 0.13
DDB1-207ENST00000535967 GPRC5DQ9NZD1 345 aa15.87■□□□□ 0.13
DDB1-207ENST00000535967 ATP6V0A2Q9Y487 856 aa15.87■□□□□ 0.13
DDB1-207ENST00000535967 ITGA6P23229 1130 aa15.86■□□□□ 0.13
DDB1-207ENST00000535967 EPHA10Q5JZY3 1008 aa15.86■□□□□ 0.13
DDB1-207ENST00000535967 LMBR1LQ6UX01 489 aa15.86■□□□□ 0.13
DDB1-207ENST00000535967 ANKRD18AQ8IVF6 992 aa15.86■□□□□ 0.13
DDB1-207ENST00000535967 CELF1Q92879 486 aaKnown RBP15.86■□□□□ 0.13
DDB1-207ENST00000535967 GPR101Q96P66 508 aaPredicted RBP15.86■□□□□ 0.13
DDB1-207ENST00000535967 BICC1Q9H694 974 aaKnown RBP15.86■□□□□ 0.13
DDB1-207ENST00000535967 SEC31BQ9NQW1 1179 aa15.86■□□□□ 0.13
DDB1-207ENST00000535967 TLL2Q9Y6L7 1015 aa15.86■□□□□ 0.13
DDB1-207ENST00000535967 ANKRD18BA2A2Z9 1011 aa15.85■□□□□ 0.13
DDB1-207ENST00000535967 RRP1P56182 461 aaKnown RBP15.85■□□□□ 0.13
DDB1-207ENST00000535967 RPS8P62241 208 aaKnown RBP15.85■□□□□ 0.13
DDB1-207ENST00000535967 SP8Q8IXZ3 490 aa15.85■□□□□ 0.13
DDB1-207ENST00000535967 PANK1Q8TE04 598 aa15.85■□□□□ 0.13
DDB1-207ENST00000535967 CCDC85AQ96PX6 553 aaPredicted RBP15.85■□□□□ 0.13
DDB1-207ENST00000535967 SHTN1A0MZ66 631 aa15.85■□□□□ 0.13
DDB1-207ENST00000535967 PLIN1O60240 522 aa15.85■□□□□ 0.13
DDB1-207ENST00000535967 GABBR2O75899 941 aa15.85■□□□□ 0.13
DDB1-207ENST00000535967 GMPSP49915 693 aaPredicted RBP15.85■□□□□ 0.13
DDB1-207ENST00000535967 IFIT5Q13325 482 aaKnown RBP15.85■□□□□ 0.13
DDB1-207ENST00000535967 MVPQ14764 893 aaKnown RBP15.85■□□□□ 0.13
DDB1-207ENST00000535967 ANKRD44Q8N8A2 993 aa15.85■□□□□ 0.13
DDB1-207ENST00000535967 GLIS2Q9BZE0 524 aaPredicted RBP15.85■□□□□ 0.13
DDB1-207ENST00000535967 CHMP4BQ9H444 224 aaKnown RBP15.85■□□□□ 0.13
DDB1-207ENST00000535967 ADARB2Q9NS39 739 aaKnown RBP15.85■□□□□ 0.13
DDB1-207ENST00000535967 DDX19BQ9UMR2 479 aa15.85■□□□□ 0.13
DDB1-207ENST00000535967 CHMP3Q9Y3E7 222 aa15.85■□□□□ 0.13
DDB1-207ENST00000535967 PSME4Q14997 1843 aa15.84■□□□□ 0.13
DDB1-207ENST00000535967 IGHMBP2P38935 993 aaKnown RBP15.84■□□□□ 0.13
DDB1-207ENST00000535967 HIRAP54198 1017 aaPredicted RBP15.84■□□□□ 0.13
DDB1-207ENST00000535967 CCDC57Q2TAC2 916 aa15.84■□□□□ 0.13
DDB1-207ENST00000535967 RTFDC1Q9BY42 306 aaPredicted RBP15.84■□□□□ 0.13
DDB1-207ENST00000535967 LRRFIP2Q9Y608 721 aaKnown RBP15.84■□□□□ 0.13
DDB1-207ENST00000535967 CELF2O95319 508 aaKnown RBP15.83■□□□□ 0.12
DDB1-207ENST00000535967 GNAI2P04899 355 aa15.83■□□□□ 0.12
DDB1-207ENST00000535967 ECE1P42892 770 aa15.83■□□□□ 0.12
DDB1-207ENST00000535967 DLK2Q6UY11 383 aa15.83■□□□□ 0.12
DDB1-207ENST00000535967 SAPCD2Q86UD0 394 aa15.83■□□□□ 0.12
DDB1-207ENST00000535967 TRPM4Q8TD43 1214 aa15.83■□□□□ 0.12
DDB1-207ENST00000535967 BSDC1Q9NW68 430 aaPredicted RBP15.83■□□□□ 0.12
DDB1-207ENST00000535967 ZNRF3Q9ULT6 936 aa15.83■□□□□ 0.12
DDB1-207ENST00000535967 PCDHB13Q9Y5F0 798 aa15.83■□□□□ 0.12
DDB1-207ENST00000535967 POLR2AP24928 1970 aaKnown RBP15.83■□□□□ 0.12
DDB1-207ENST00000535967 ARAP2Q8WZ64 1704 aa15.83■□□□□ 0.12
DDB1-207ENST00000535967 ZBTB7BO15156 539 aaPredicted RBP15.82■□□□□ 0.12
DDB1-207ENST00000535967 RAD17O75943 681 aa15.82■□□□□ 0.12
DDB1-207ENST00000535967 MTX1Q13505 466 aa15.82■□□□□ 0.12
DDB1-207ENST00000535967 PDE4DIPQ5VU43 2346 aa15.81■□□□□ 0.12
DDB1-207ENST00000535967 CCDC85CA6NKD9 419 aa15.81■□□□□ 0.12
DDB1-207ENST00000535967 YDJCA8MPS7 323 aa15.81■□□□□ 0.12
DDB1-207ENST00000535967 TAF7LQ5H9L4 462 aa15.81■□□□□ 0.12
DDB1-207ENST00000535967 SUPT20HQ8NEM7 779 aa15.81■□□□□ 0.12
DDB1-207ENST00000535967 MPHOSPH8Q99549 860 aa15.81■□□□□ 0.12
DDB1-207ENST00000535967 PCDHB8Q9UN66 801 aa15.81■□□□□ 0.12
DDB1-207ENST00000535967 COG6Q9Y2V7 657 aa15.81■□□□□ 0.12
DDB1-207ENST00000535967 MYH13Q9UKX3 1938 aa15.81■□□□□ 0.12
DDB1-207ENST00000535967 KIAA2012Q0VF49 1180 aa15.8■□□□□ 0.12
DDB1-207ENST00000535967 CIAPIN1Q6FI81 312 aa15.8■□□□□ 0.12
DDB1-207ENST00000535967 DPP8Q6V1X1 898 aaPredicted RBP15.8■□□□□ 0.12
DDB1-207ENST00000535967 MPNDQ8N594 471 aa15.8■□□□□ 0.12
DDB1-207ENST00000535967 MS4A3Q96HJ5 214 aa15.8■□□□□ 0.12
DDB1-207ENST00000535967 ZIC5Q96T25 663 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms