RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 CSRNP1Q96S65 589 aa16.63■□□□□ 0.25
TNFRSF1A-207ENST00000535958 BSDC1Q9NW68 430 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1A-207ENST00000535958 CCT4P50991 539 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-207ENST00000535958 CTU1Q7Z7A3 348 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-207ENST00000535958 GREM2Q9H772 168 aa16.62■□□□□ 0.25
TNFRSF1A-207ENST00000535958 HDAC9Q9UKV0 1011 aa16.62■□□□□ 0.25
TNFRSF1A-207ENST00000535958 KCNJ4P48050 445 aa16.61■□□□□ 0.25
TNFRSF1A-207ENST00000535958 TTLL11Q8NHH1 800 aa16.61■□□□□ 0.25
TNFRSF1A-207ENST00000535958 GMLQ99445 158 aa16.61■□□□□ 0.25
TNFRSF1A-207ENST00000535958 COA1Q9GZY4 146 aa16.61■□□□□ 0.25
TNFRSF1A-207ENST00000535958 MINPP1Q9UNW1 487 aa16.61■□□□□ 0.25
TNFRSF1A-207ENST00000535958 SLC34A2O95436 690 aa16.6■□□□□ 0.25
TNFRSF1A-207ENST00000535958 SOX10P56693 466 aa16.6■□□□□ 0.25
TNFRSF1A-207ENST00000535958 CWF19L2Q2TBE0 894 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1A-207ENST00000535958 STRIP1Q5VSL9 837 aa16.6■□□□□ 0.25
TNFRSF1A-207ENST00000535958 UBE3BQ7Z3V4 1068 aa16.6■□□□□ 0.25
TNFRSF1A-207ENST00000535958 MPHOSPH8Q99549 860 aa16.6■□□□□ 0.25
TNFRSF1A-207ENST00000535958 LEMD3Q9Y2U8 911 aa16.6■□□□□ 0.25
TNFRSF1A-207ENST00000535958 IGKV5-2P06315 115 aa16.59■□□□□ 0.25
TNFRSF1A-207ENST00000535958 MMP14P50281 582 aa16.59■□□□□ 0.25
TNFRSF1A-207ENST00000535958 NBPF9Q3BBW0 867 aa16.59■□□□□ 0.25
TNFRSF1A-207ENST00000535958 TSPYL6Q8N831 410 aa16.59■□□□□ 0.25
TNFRSF1A-207ENST00000535958 TSR2Q969E8 191 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1A-207ENST00000535958 ANKRD2Q9GZV1 360 aa16.59■□□□□ 0.25
TNFRSF1A-207ENST00000535958 MYH16Q9H6N6 1097 aa16.59■□□□□ 0.25
TNFRSF1A-207ENST00000535958 SCAF8Q9UPN6 1271 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1A-207ENST00000535958 NEURL1BA8MQ27 555 aa16.58■□□□□ 0.24
TNFRSF1A-207ENST00000535958 UBE2Q2LH0YL09 131 aa16.58■□□□□ 0.24
TNFRSF1A-207ENST00000535958 SREBF2Q12772 1141 aa16.58■□□□□ 0.24
TNFRSF1A-207ENST00000535958 TWISTNBQ3B726 338 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-207ENST00000535958 DACT2Q5SW24 774 aa16.58■□□□□ 0.24
TNFRSF1A-207ENST00000535958 APOBEC3FQ8IUX4 373 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1A-207ENST00000535958 ZNF804BA4D1E1 1349 aa16.57■□□□□ 0.24
TNFRSF1A-207ENST00000535958 WNT10BO00744 389 aa16.57■□□□□ 0.24
TNFRSF1A-207ENST00000535958 SASH1O94885 1247 aa16.57■□□□□ 0.24
TNFRSF1A-207ENST00000535958 ITGA6P23229 1130 aa16.57■□□□□ 0.24
TNFRSF1A-207ENST00000535958 PRAMEF18Q5VWM3 479 aa16.57■□□□□ 0.24
TNFRSF1A-207ENST00000535958 MOB2Q70IA6 237 aa16.57■□□□□ 0.24
TNFRSF1A-207ENST00000535958 ARMC9Q7Z3E5 817 aa16.57■□□□□ 0.24
TNFRSF1A-207ENST00000535958 MXD3Q9BW11 206 aa16.57■□□□□ 0.24
TNFRSF1A-207ENST00000535958 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
TNFRSF1A-207ENST00000535958 MKRN3Q13064 507 aaKnown RBP16.56■□□□□ 0.24
TNFRSF1A-207ENST00000535958 FKBP5Q13451 457 aaPredicted RBP16.56■□□□□ 0.24
TNFRSF1A-207ENST00000535958 PKN2Q16513 984 aaKnown RBP16.56■□□□□ 0.24
TNFRSF1A-207ENST00000535958 TTLL5Q6EMB2 1281 aa16.56■□□□□ 0.24
TNFRSF1A-207ENST00000535958 KIAA0825Q8IV33 1275 aa16.56■□□□□ 0.24
TNFRSF1A-207ENST00000535958 PRKG1Q13976 671 aa16.55■□□□□ 0.24
TNFRSF1A-207ENST00000535958 WTIPA6NIX2 430 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF1A-207ENST00000535958 H7C1W4 665 aa16.54■□□□□ 0.24
TNFRSF1A-207ENST00000535958 TBC1D8O95759 1140 aa16.54■□□□□ 0.24
TNFRSF1A-207ENST00000535958 GTF2IP78347 998 aa16.54■□□□□ 0.24
TNFRSF1A-207ENST00000535958 FLIIQ13045 1269 aa16.54■□□□□ 0.24
TNFRSF1A-207ENST00000535958 GCKRQ14397 625 aa16.54■□□□□ 0.24
TNFRSF1A-207ENST00000535958 CHMP3Q9Y3E7 222 aa16.54■□□□□ 0.24
TNFRSF1A-207ENST00000535958 COL1A1P02452 1464 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF1A-207ENST00000535958 ANKRD18BA2A2Z9 1011 aa16.53■□□□□ 0.24
TNFRSF1A-207ENST00000535958 CCDC27Q2M243 656 aa16.53■□□□□ 0.24
TNFRSF1A-207ENST00000535958 ZNF296Q8WUU4 475 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1A-207ENST00000535958 DNAAF4Q8WXU2 420 aa16.53■□□□□ 0.24
TNFRSF1A-207ENST00000535958 PLA2G12BQ9BX93 195 aa16.53■□□□□ 0.24
TNFRSF1A-207ENST00000535958 HPS5Q9UPZ3 1129 aa16.53■□□□□ 0.24
TNFRSF1A-207ENST00000535958 MYO1BO43795 1136 aa16.52■□□□□ 0.24
TNFRSF1A-207ENST00000535958 CHRNDQ07001 517 aa16.52■□□□□ 0.24
TNFRSF1A-207ENST00000535958 DLGAP5Q15398 846 aa16.52■□□□□ 0.24
TNFRSF1A-207ENST00000535958 G2E3Q7L622 706 aa16.52■□□□□ 0.24
TNFRSF1A-207ENST00000535958 TXNRD3Q86VQ6 643 aa16.52■□□□□ 0.24
TNFRSF1A-207ENST00000535958 WWC1Q8IX03 1113 aa16.52■□□□□ 0.24
TNFRSF1A-207ENST00000535958 LINS1Q8NG48 757 aa16.52■□□□□ 0.24
TNFRSF1A-207ENST00000535958 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.52■□□□□ 0.24
TNFRSF1A-207ENST00000535958 ANGEL1Q9UNK9 670 aaKnown RBP16.52■□□□□ 0.24
TNFRSF1A-207ENST00000535958 ZNF646O15015 1829 aaPredicted RBP16.52■□□□□ 0.23
TNFRSF1A-207ENST00000535958 IL16Q14005 1332 aa16.51■□□□□ 0.23
TNFRSF1A-207ENST00000535958 KLRK1P26718 216 aa16.51■□□□□ 0.23
TNFRSF1A-207ENST00000535958 IFIT5Q13325 482 aaKnown RBP16.51■□□□□ 0.23
TNFRSF1A-207ENST00000535958 TAF7LQ5H9L4 462 aa16.51■□□□□ 0.23
TNFRSF1A-207ENST00000535958 ZNF804AQ7Z570 1209 aa16.51■□□□□ 0.23
TNFRSF1A-207ENST00000535958 PDE4DIPQ5VU43 2346 aa16.5■□□□□ 0.23
TNFRSF1A-207ENST00000535958 GPR25O00155 361 aa16.5■□□□□ 0.23
TNFRSF1A-207ENST00000535958 ALDH1A1P00352 501 aa16.5■□□□□ 0.23
TNFRSF1A-207ENST00000535958 TM4SF4P48230 202 aa16.5■□□□□ 0.23
TNFRSF1A-207ENST00000535958 PPP1R12BO60237 982 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1A-207ENST00000535958 FKTNO75072 461 aa16.49■□□□□ 0.23
TNFRSF1A-207ENST00000535958 PTPN12Q05209 780 aaKnown RBP16.49■□□□□ 0.23
TNFRSF1A-207ENST00000535958 CD209Q9NNX6 404 aa16.49■□□□□ 0.23
TNFRSF1A-207ENST00000535958 PPP2R3BQ9Y5P8 575 aa16.49■□□□□ 0.23
TNFRSF1A-207ENST00000535958 FANCIQ9NVI1 1328 aa16.48■□□□□ 0.23
TNFRSF1A-207ENST00000535958 F8W031 263 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1A-207ENST00000535958 CSF1RP07333 972 aa16.48■□□□□ 0.23
TNFRSF1A-207ENST00000535958 RBM5P52756 815 aaKnown RBP eCLIP16.48■□□□□ 0.23
TNFRSF1A-207ENST00000535958 NOM1Q5C9Z4 860 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1A-207ENST00000535958 FBXO46Q6PJ61 603 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1A-207ENST00000535958 SLC10A4Q96EP9 437 aa16.48■□□□□ 0.23
TNFRSF1A-207ENST00000535958 DEFB129Q9H1M3 183 aa16.48■□□□□ 0.23
TNFRSF1A-207ENST00000535958 VEZTQ9HBM0 779 aa16.48■□□□□ 0.23
TNFRSF1A-207ENST00000535958 CACNA1FO60840 1977 aa16.47■□□□□ 0.23
TNFRSF1A-207ENST00000535958 MANSC4A6NHS7 340 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF1A-207ENST00000535958 TAF5LO75529 589 aa16.47■□□□□ 0.23
TNFRSF1A-207ENST00000535958 CCDC57Q2TAC2 916 aa16.47■□□□□ 0.23
TNFRSF1A-207ENST00000535958 SUPT20HL1Q3ZLR7 823 aa16.47■□□□□ 0.23
TNFRSF1A-207ENST00000535958 SPRYD7Q5W111 196 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms