RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 MEX3CQ5U5Q3 659 aaKnown RBP9.65□□□□□ -0.86
COL21A1-212ENST00000535941 C15orf52Q6ZUT6 534 aaKnown RBP9.65□□□□□ -0.86
COL21A1-212ENST00000535941 DSCC1Q9BVC3 393 aa9.65□□□□□ -0.86
COL21A1-212ENST00000535941 NYXQ9GZU5 481 aa9.65□□□□□ -0.86
COL21A1-212ENST00000535941 BOLA2Q9H3K6 86 aa9.65□□□□□ -0.86
COL21A1-212ENST00000535941 SIPA1L1O43166 1804 aa9.65□□□□□ -0.86
COL21A1-212ENST00000535941 MCM2P49736 904 aa9.65□□□□□ -0.86
COL21A1-212ENST00000535941 CCDC152Q4G0S7 254 aa9.65□□□□□ -0.86
COL21A1-212ENST00000535941 LPIN2Q92539 896 aa9.65□□□□□ -0.86
COL21A1-212ENST00000535941 INTS4Q96HW7 963 aaKnown RBP9.65□□□□□ -0.86
COL21A1-212ENST00000535941 MYH2Q9UKX2 1941 aa9.65□□□□□ -0.86
COL21A1-212ENST00000535941 BAZ2AQ9UIF9 1905 aaKnown RBP9.65□□□□□ -0.87
COL21A1-212ENST00000535941 EDC3Q96F86 508 aaKnown RBP9.64□□□□□ -0.87
COL21A1-212ENST00000535941 ADAMTSL1Q8N6G6 1762 aa9.64□□□□□ -0.87
COL21A1-212ENST00000535941 TCHHQ07283 1943 aa9.64□□□□□ -0.87
COL21A1-212ENST00000535941 ST3GAL1Q11201 340 aa9.64□□□□□ -0.87
COL21A1-212ENST00000535941 HSCBQ8IWL3 235 aa9.64□□□□□ -0.87
COL21A1-212ENST00000535941 DHX37Q8IY37 1157 aaKnown RBP9.64□□□□□ -0.87
COL21A1-212ENST00000535941 MAST3O60307 1309 aa9.64□□□□□ -0.87
COL21A1-212ENST00000535941 IGSF3O75054 1194 aa9.64□□□□□ -0.87
COL21A1-212ENST00000535941 GYS1P13807 737 aa9.64□□□□□ -0.87
COL21A1-212ENST00000535941 CWC27Q6UX04 472 aaKnown RBP9.64□□□□□ -0.87
COL21A1-212ENST00000535941 SEC31BQ9NQW1 1179 aa9.64□□□□□ -0.87
COL21A1-212ENST00000535941 HMG20BQ9P0W2 317 aa9.64□□□□□ -0.87
COL21A1-212ENST00000535941 CEP126Q9P2H0 1117 aa9.64□□□□□ -0.87
COL21A1-212ENST00000535941 SRP68Q9UHB9 627 aaKnown RBP9.64□□□□□ -0.87
COL21A1-212ENST00000535941 SLC27A2O14975 620 aa9.63□□□□□ -0.87
COL21A1-212ENST00000535941 ATP2B3Q16720 1220 aa9.63□□□□□ -0.87
COL21A1-212ENST00000535941 RTCBQ9Y3I0 505 aaKnown RBP9.63□□□□□ -0.87
COL21A1-212ENST00000535941 NID2Q14112 1375 aa9.63□□□□□ -0.87
COL21A1-212ENST00000535941 CHGBP05060 677 aa9.63□□□□□ -0.87
COL21A1-212ENST00000535941 HMGB2P26583 209 aaKnown RBP9.63□□□□□ -0.87
COL21A1-212ENST00000535941 KCNQ4P56696 695 aa9.63□□□□□ -0.87
COL21A1-212ENST00000535941 MCMDC2Q4G0Z9 681 aa9.63□□□□□ -0.87
COL21A1-212ENST00000535941 FAM182BQ5T319 152 aa9.63□□□□□ -0.87
COL21A1-212ENST00000535941 CREB3L3Q68CJ9 461 aa9.63□□□□□ -0.87
COL21A1-212ENST00000535941 GNPATO15228 680 aa9.63□□□□□ -0.87
COL21A1-212ENST00000535941 HCLS1P14317 486 aaPredicted RBP9.63□□□□□ -0.87
COL21A1-212ENST00000535941 COL9A3Q14050 684 aaPredicted RBP9.63□□□□□ -0.87
COL21A1-212ENST00000535941 VPS53Q5VIR6 699 aa9.63□□□□□ -0.87
COL21A1-212ENST00000535941 M0R2C6 588 aa9.62□□□□□ -0.87
COL21A1-212ENST00000535941 RNF113AO15541 343 aaKnown RBP9.62□□□□□ -0.87
COL21A1-212ENST00000535941 ADCK5Q3MIX3 580 aa9.62□□□□□ -0.87
COL21A1-212ENST00000535941 LDHAL6AQ6ZMR3 332 aa9.62□□□□□ -0.87
COL21A1-212ENST00000535941 ANO2Q9NQ90 1003 aa9.62□□□□□ -0.87
COL21A1-212ENST00000535941 DIAPH3Q9NSV4 1193 aa9.62□□□□□ -0.87
COL21A1-212ENST00000535941 RBM8AQ9Y5S9 174 aaKnown RBP9.62□□□□□ -0.87
COL21A1-212ENST00000535941 ZFYP08048 801 aaPredicted RBP9.62□□□□□ -0.87
COL21A1-212ENST00000535941 ADD2P35612 726 aa9.62□□□□□ -0.87
COL21A1-212ENST00000535941 CCDC102BQ68D86 513 aa9.62□□□□□ -0.87
COL21A1-212ENST00000535941 TMED8Q6PL24 325 aaPredicted RBP9.62□□□□□ -0.87
COL21A1-212ENST00000535941 CDC5LQ99459 802 aaKnown RBP9.62□□□□□ -0.87
COL21A1-212ENST00000535941 CHMP5Q9NZZ3 219 aa9.62□□□□□ -0.87
COL21A1-212ENST00000535941 ZDHHC9Q9Y397 364 aa9.62□□□□□ -0.87
COL21A1-212ENST00000535941 TAF6LQ9Y6J9 622 aa9.62□□□□□ -0.87
COL21A1-212ENST00000535941 SLX4Q8IY92 1834 aa9.62□□□□□ -0.87
COL21A1-212ENST00000535941 POLRMTO00411 1230 aaKnown RBP9.61□□□□□ -0.87
COL21A1-212ENST00000535941 MCCP23508 829 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 HOXA10P31260 410 aaPredicted RBP9.61□□□□□ -0.87
COL21A1-212ENST00000535941 EVCP57679 992 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 NFIXQ14938 502 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 UBE3CQ15386 1083 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 RUFY3Q7L099 469 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 WDR19Q8NEZ3 1342 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 CHRNDQ07001 517 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 UBE4AQ14139 1066 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 ZNF827Q17R98 1081 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 FSD1Q9BTV5 496 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 NDUFB9Q9Y6M9 179 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 FER1L6Q2WGJ9 1857 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 SALL1Q9NSC2 1324 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 IFIT1P09914 478 aaKnown RBP9.61□□□□□ -0.87
COL21A1-212ENST00000535941 UQCRFS1P1P0C7P4 283 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 FBXO33Q7Z6M2 555 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 OSBP2Q969R2 916 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 ARXQ96QS3 562 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 NBPF3Q9H094 633 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 CWC22Q9HCG8 908 aaKnown RBP9.61□□□□□ -0.87
COL21A1-212ENST00000535941 MINPP1Q9UNW1 487 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 MYH1P12882 1939 aa9.61□□□□□ -0.87
COL21A1-212ENST00000535941 ST18O60284 1047 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 ZAP70P43403 619 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 EXOSC10Q01780 885 aaKnown RBP9.6□□□□□ -0.87
COL21A1-212ENST00000535941 METTL24Q5JXM2 366 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 SMIM5Q71RC9 77 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 TMX3Q96JJ7 454 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 RRAGDQ9NQL2 400 aaPredicted RBP9.6□□□□□ -0.87
COL21A1-212ENST00000535941 PIH1D3Q9NQM4 214 aaKnown RBP9.6□□□□□ -0.87
COL21A1-212ENST00000535941 ARFGEF1Q9Y6D6 1849 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 PNPLA7Q6ZV29 1317 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 PHKA1P46020 1223 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 TOB2Q14106 344 aaPredicted RBP9.6□□□□□ -0.87
COL21A1-212ENST00000535941 ALX1Q15699 326 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 TAF7LQ5H9L4 462 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 STOX1Q6ZVD7 989 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 SCN9AQ15858 1988 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 MYH6P13533 1939 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 MYH8P13535 1937 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 FRAT2O75474 233 aaPredicted RBP9.6□□□□□ -0.87
COL21A1-212ENST00000535941 DDR1Q08345 913 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms