RNA–Protein interactions for RNA: ENST00000535883.5

LRTOMT-211, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 1,263 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-211ENST00000535883 SSC5DA1L4H1 1573 aa11.62□□□□□ -0.55
LRTOMT-211ENST00000535883 AOX1Q06278 1338 aa11.62□□□□□ -0.55
LRTOMT-211ENST00000535883 USP17L3A6NCW0 530 aa11.62□□□□□ -0.55
LRTOMT-211ENST00000535883 USP17L4A6NCW7 530 aa11.62□□□□□ -0.55
LRTOMT-211ENST00000535883 USP17L1Q7RTZ2 530 aa11.62□□□□□ -0.55
LRTOMT-211ENST00000535883 PLBD2Q8NHP8 589 aa11.62□□□□□ -0.55
LRTOMT-211ENST00000535883 CCDC85AQ96PX6 553 aaPredicted RBP11.62□□□□□ -0.55
LRTOMT-211ENST00000535883 ANKIB1Q9P2G1 1089 aa11.62□□□□□ -0.55
LRTOMT-211ENST00000535883 PCDHAC2Q9Y5I4 1007 aa11.62□□□□□ -0.55
LRTOMT-211ENST00000535883 DLL1O00548 723 aa11.61□□□□□ -0.55
LRTOMT-211ENST00000535883 SREBF2Q12772 1141 aa11.61□□□□□ -0.55
LRTOMT-211ENST00000535883 CRHR2Q13324 411 aa11.61□□□□□ -0.55
LRTOMT-211ENST00000535883 ANKRD13DQ6ZTN6 518 aa11.61□□□□□ -0.55
LRTOMT-211ENST00000535883 ZNF333Q96JL9 665 aa11.61□□□□□ -0.55
LRTOMT-211ENST00000535883 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.61□□□□□ -0.55
LRTOMT-211ENST00000535883 LAMA2P24043 3122 aaKnown RBP11.6□□□□□ -0.55
LRTOMT-211ENST00000535883 TRIM28Q13263 835 aaKnown RBP11.6□□□□□ -0.55
LRTOMT-211ENST00000535883 ANGEL1Q9UNK9 670 aaKnown RBP11.6□□□□□ -0.55
LRTOMT-211ENST00000535883 KLRK1P26718 216 aa11.59□□□□□ -0.55
LRTOMT-211ENST00000535883 PODNQ7Z5L7 613 aa11.59□□□□□ -0.55
LRTOMT-211ENST00000535883 WNK4Q96J92 1243 aa11.59□□□□□ -0.55
LRTOMT-211ENST00000535883 PRO3102Q9H379 93 aa11.59□□□□□ -0.55
LRTOMT-211ENST00000535883 RBM27Q9P2N5 1060 aaKnown RBP11.59□□□□□ -0.55
LRTOMT-211ENST00000535883 EYSQ5T1H1 3165 aa11.58□□□□□ -0.56
LRTOMT-211ENST00000535883 G3V3G9 751 aa11.58□□□□□ -0.56
LRTOMT-211ENST00000535883 CHL1O00533 1208 aa11.58□□□□□ -0.56
LRTOMT-211ENST00000535883 RIPK4P57078 832 aa11.58□□□□□ -0.56
LRTOMT-211ENST00000535883 MAP3K11Q16584 847 aa11.58□□□□□ -0.56
LRTOMT-211ENST00000535883 DCAF8Q5TAQ9 597 aa11.58□□□□□ -0.56
LRTOMT-211ENST00000535883 CHRDL2Q6WN34 429 aa11.58□□□□□ -0.56
LRTOMT-211ENST00000535883 ARMC9Q7Z3E5 817 aa11.58□□□□□ -0.56
LRTOMT-211ENST00000535883 SLC10A4Q96EP9 437 aa11.58□□□□□ -0.56
LRTOMT-211ENST00000535883 EFCC1Q9HA90 598 aa11.58□□□□□ -0.56
LRTOMT-211ENST00000535883 PTCH2Q9Y6C5 1203 aa11.58□□□□□ -0.56
LRTOMT-211ENST00000535883 MANSC4A6NHS7 340 aaPredicted RBP11.57□□□□□ -0.56
LRTOMT-211ENST00000535883 ALDH1A1P00352 501 aa11.57□□□□□ -0.56
LRTOMT-211ENST00000535883 MYCP01106 439 aaPredicted RBP11.57□□□□□ -0.56
LRTOMT-211ENST00000535883 ZBTB38Q8NAP3 1195 aaPredicted RBP11.57□□□□□ -0.56
LRTOMT-211ENST00000535883 XDHP47989 1333 aa11.57□□□□□ -0.56
LRTOMT-211ENST00000535883 SPTBN5Q9NRC6 3674 aaKnown RBP11.56□□□□□ -0.56
LRTOMT-211ENST00000535883 TESPA1A2RU30 521 aaPredicted RBP11.56□□□□□ -0.56
LRTOMT-211ENST00000535883 USP2O75604 605 aaPredicted RBP11.56□□□□□ -0.56
LRTOMT-211ENST00000535883 INHBEP58166 350 aa11.56□□□□□ -0.56
LRTOMT-211ENST00000535883 SP3Q02447 781 aa11.56□□□□□ -0.56
LRTOMT-211ENST00000535883 KIAA0825Q8IV33 1275 aa11.56□□□□□ -0.56
LRTOMT-211ENST00000535883 CERS5Q8N5B7 392 aa11.56□□□□□ -0.56
LRTOMT-211ENST00000535883 CNKSR2Q8WXI2 1034 aa11.56□□□□□ -0.56
LRTOMT-211ENST00000535883 SHISA4Q96DD7 197 aa11.56□□□□□ -0.56
LRTOMT-211ENST00000535883 ERO1AQ96HE7 468 aa11.56□□□□□ -0.56
LRTOMT-211ENST00000535883 MS4A4AQ96JQ5 239 aa11.56□□□□□ -0.56
LRTOMT-211ENST00000535883 DEFB129Q9H1M3 183 aa11.56□□□□□ -0.56
LRTOMT-211ENST00000535883 PHAXQ9H814 394 aaKnown RBP11.56□□□□□ -0.56
LRTOMT-211ENST00000535883 BABAM1Q9NWV8 329 aa11.56□□□□□ -0.56
LRTOMT-211ENST00000535883 MINPP1Q9UNW1 487 aa11.56□□□□□ -0.56
LRTOMT-211ENST00000535883 LAMB1P07942 1786 aa11.55□□□□□ -0.56
LRTOMT-211ENST00000535883 SOX1O00570 391 aaPredicted RBP11.55□□□□□ -0.56
LRTOMT-211ENST00000535883 ATP2B4P23634 1241 aa11.55□□□□□ -0.56
LRTOMT-211ENST00000535883 TMPOP42166 694 aaKnown RBP11.55□□□□□ -0.56
LRTOMT-211ENST00000535883 NBPF12Q5TAG4 269 aaPredicted RBP11.55□□□□□ -0.56
LRTOMT-211ENST00000535883 STRIP1Q5VSL9 837 aa11.55□□□□□ -0.56
LRTOMT-211ENST00000535883 CDAN1Q8IWY9 1227 aa11.55□□□□□ -0.56
LRTOMT-211ENST00000535883 SLC17A8Q8NDX2 589 aa11.55□□□□□ -0.56
LRTOMT-211ENST00000535883 ARHGAP39Q9C0H5 1083 aa11.55□□□□□ -0.56
LRTOMT-211ENST00000535883 TRIM35Q9UPQ4 493 aa11.55□□□□□ -0.56
LRTOMT-211ENST00000535883 ZSWIM8A7E2V4 1837 aa11.55□□□□□ -0.56
LRTOMT-211ENST00000535883 SNAP23O00161 211 aa11.54□□□□□ -0.56
LRTOMT-211ENST00000535883 ZBTB48P10074 688 aaPredicted RBP11.54□□□□□ -0.56
LRTOMT-211ENST00000535883 NF2P35240 595 aa11.54□□□□□ -0.56
LRTOMT-211ENST00000535883 HDGFL1Q5TGJ6 251 aa11.54□□□□□ -0.56
LRTOMT-211ENST00000535883 SH3TC2Q8TF17 1288 aa11.54□□□□□ -0.56
LRTOMT-211ENST00000535883 MED23Q9ULK4 1368 aa11.54□□□□□ -0.56
LRTOMT-211ENST00000535883 PDE8AO60658 829 aa11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 PCCAP05165 728 aaPredicted RBP11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 CTGFP29279 349 aa11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 CCT4P50991 539 aaKnown RBP11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 MTFR1Q15390 333 aa11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 CCDC152Q4G0S7 254 aa11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 TTLL5Q6EMB2 1281 aa11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 UBE2Q1Q7Z7E8 422 aa11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 APOBEC3FQ8IUX4 373 aaKnown RBP11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 ANKRD18AQ8IVF6 992 aa11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 OGFOD1Q8N543 542 aa11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 BRI3BPQ8WY22 251 aa11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 FBXW7Q969H0 707 aa11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 MYD88Q99836 296 aa11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 TMEM106CQ9BVX2 250 aa11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 GREM2Q9H772 168 aa11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 IRS2Q9Y4H2 1338 aa11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 PRUNE2Q8WUY3 3088 aa11.53□□□□□ -0.56
LRTOMT-211ENST00000535883 GTF2IP78347 998 aa11.52□□□□□ -0.57
LRTOMT-211ENST00000535883 TTLL11Q8NHH1 800 aa11.52□□□□□ -0.57
LRTOMT-211ENST00000535883 PRMT6Q96LA8 375 aaPredicted RBP11.52□□□□□ -0.57
LRTOMT-211ENST00000535883 BSDC1Q9NW68 430 aaPredicted RBP11.52□□□□□ -0.57
LRTOMT-211ENST00000535883 DBF4Q9UBU7 674 aaPredicted RBP11.52□□□□□ -0.57
LRTOMT-211ENST00000535883 CLRN2A0PK11 232 aa11.51□□□□□ -0.57
LRTOMT-211ENST00000535883 NEFMP07197 916 aa11.51□□□□□ -0.57
LRTOMT-211ENST00000535883 SLC4A8Q2Y0W8 1093 aa11.51□□□□□ -0.57
LRTOMT-211ENST00000535883 SLC9C1Q4G0N8 1177 aa11.51□□□□□ -0.57
LRTOMT-211ENST00000535883 DUSP27Q5VZP5 1158 aa11.51□□□□□ -0.57
LRTOMT-211ENST00000535883 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms