RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 SCN9AQ15858 1988 aa27.69■■■□□ 2.02
VPS37C-202ENST00000535818 EYA2O00167 538 aa27.69■■■□□ 2.02
VPS37C-202ENST00000535818 FBXW7Q969H0 707 aa27.69■■■□□ 2.02
VPS37C-202ENST00000535818 CLEC11AQ9Y240 323 aa27.69■■■□□ 2.02
VPS37C-202ENST00000535818 SRGAP3O43295 1099 aa27.68■■■□□ 2.02
VPS37C-202ENST00000535818 POTEIP0CG38 1075 aa27.68■■■□□ 2.02
VPS37C-202ENST00000535818 POTEJP0CG39 1038 aa27.68■■■□□ 2.02
VPS37C-202ENST00000535818 UBE4AQ14139 1066 aa27.68■■■□□ 2.02
VPS37C-202ENST00000535818 LDHDQ86WU2 507 aa27.68■■■□□ 2.02
VPS37C-202ENST00000535818 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.68■■■□□ 2.02
VPS37C-202ENST00000535818 SIL1Q9H173 461 aa27.68■■■□□ 2.02
VPS37C-202ENST00000535818 USP17L3A6NCW0 530 aa27.67■■■□□ 2.02
VPS37C-202ENST00000535818 USP17L4A6NCW7 530 aa27.67■■■□□ 2.02
VPS37C-202ENST00000535818 RPS12P25398 132 aaKnown RBP27.67■■■□□ 2.02
VPS37C-202ENST00000535818 C15orf52Q6ZUT6 534 aaKnown RBP27.67■■■□□ 2.02
VPS37C-202ENST00000535818 USP17L1Q7RTZ2 530 aa27.67■■■□□ 2.02
VPS37C-202ENST00000535818 ZNF804AQ7Z570 1209 aa27.67■■■□□ 2.02
VPS37C-202ENST00000535818 ADARB2Q9NS39 739 aaKnown RBP27.67■■■□□ 2.02
VPS37C-202ENST00000535818 PSME4Q14997 1843 aa27.67■■■□□ 2.02
VPS37C-202ENST00000535818 VIL1P09327 827 aaKnown RBP27.66■■■□□ 2.02
VPS37C-202ENST00000535818 CHADLQ6NUI6 762 aa27.66■■■□□ 2.02
VPS37C-202ENST00000535818 CNOT7Q9UIV1 285 aaKnown RBP27.66■■■□□ 2.02
VPS37C-202ENST00000535818 FBXO3Q9UK99 471 aa27.66■■■□□ 2.02
VPS37C-202ENST00000535818 H7C1D1 291 aa27.65■■■□□ 2.02
VPS37C-202ENST00000535818 MTX1Q13505 466 aa27.65■■■□□ 2.02
VPS37C-202ENST00000535818 MICALL2Q8IY33 904 aa27.65■■■□□ 2.02
VPS37C-202ENST00000535818 DPF2Q92785 391 aa27.65■■■□□ 2.02
VPS37C-202ENST00000535818 CD209Q9NNX6 404 aa27.65■■■□□ 2.02
VPS37C-202ENST00000535818 PA2G4Q9UQ80 394 aaKnown RBP27.65■■■□□ 2.02
VPS37C-202ENST00000535818 IRS2Q9Y4H2 1338 aa27.65■■■□□ 2.02
VPS37C-202ENST00000535818 PDE8BO95263 885 aa27.64■■■□□ 2.02
VPS37C-202ENST00000535818 RSBN1LQ6PCB5 846 aaPredicted RBP27.64■■■□□ 2.02
VPS37C-202ENST00000535818 USP50Q70EL3 339 aaPredicted RBP27.64■■■□□ 2.02
VPS37C-202ENST00000535818 ZBTB7BO15156 539 aaPredicted RBP27.63■■■□□ 2.01
VPS37C-202ENST00000535818 CIAO1O76071 339 aa27.63■■■□□ 2.01
VPS37C-202ENST00000535818 HSPA6P17066 643 aa27.63■■■□□ 2.01
VPS37C-202ENST00000535818 VGLL2Q8N8G2 317 aa27.63■■■□□ 2.01
VPS37C-202ENST00000535818 C1orf115Q9H7X2 142 aa27.63■■■□□ 2.01
VPS37C-202ENST00000535818 COPRSQ9NQ92 184 aa27.63■■■□□ 2.01
VPS37C-202ENST00000535818 ATG9AQ7Z3C6 839 aa27.62■■■□□ 2.01
VPS37C-202ENST00000535818 AGBL3Q8NEM8 1001 aa27.62■■■□□ 2.01
VPS37C-202ENST00000535818 ADAMTSL1Q8N6G6 1762 aa27.61■■■□□ 2.01
VPS37C-202ENST00000535818 SHTN1A0MZ66 631 aa27.61■■■□□ 2.01
VPS37C-202ENST00000535818 IL15P40933 162 aaPredicted RBP27.61■■■□□ 2.01
VPS37C-202ENST00000535818 MVPQ14764 893 aaKnown RBP27.61■■■□□ 2.01
VPS37C-202ENST00000535818 PUM3Q15397 648 aaKnown RBP27.61■■■□□ 2.01
VPS37C-202ENST00000535818 STRIP1Q5VSL9 837 aa27.61■■■□□ 2.01
VPS37C-202ENST00000535818 COG6Q9Y2V7 657 aa27.61■■■□□ 2.01
VPS37C-202ENST00000535818 GTF2IP78347 998 aa27.6■■■□□ 2.01
VPS37C-202ENST00000535818 TTLL5Q6EMB2 1281 aa27.6■■■□□ 2.01
VPS37C-202ENST00000535818 CEP126Q9P2H0 1117 aa27.6■■■□□ 2.01
VPS37C-202ENST00000535818 ZNF609O15014 1411 aa27.59■■■□□ 2.01
VPS37C-202ENST00000535818 PNMA6EA0A0J9YXQ4 647 aa27.59■■■□□ 2.01
VPS37C-202ENST00000535818 IFIT1P09914 478 aaKnown RBP27.59■■■□□ 2.01
VPS37C-202ENST00000535818 HIBADHP31937 336 aaKnown RBP27.59■■■□□ 2.01
VPS37C-202ENST00000535818 GYG1P46976 350 aa27.59■■■□□ 2.01
VPS37C-202ENST00000535818 VPS37DQ86XT2 251 aa27.59■■■□□ 2.01
VPS37C-202ENST00000535818 DDX19BQ9UMR2 479 aa27.59■■■□□ 2.01
VPS37C-202ENST00000535818 MYO3BQ8WXR4 1341 aa27.59■■■□□ 2.01
VPS37C-202ENST00000535818 IL1R1P14778 569 aa27.58■■■□□ 2.01
VPS37C-202ENST00000535818 CAVIN4Q5BKX8 364 aa27.58■■■□□ 2.01
VPS37C-202ENST00000535818 DACT2Q5SW24 774 aa27.58■■■□□ 2.01
VPS37C-202ENST00000535818 TRPM4Q8TD43 1214 aa27.58■■■□□ 2.01
VPS37C-202ENST00000535818 SLC5A1P13866 664 aa27.57■■■□□ 2
VPS37C-202ENST00000535818 MAP1SQ66K74 1059 aaPredicted RBP27.57■■■□□ 2
VPS37C-202ENST00000535818 SAMD7Q7Z3H4 446 aa27.57■■■□□ 2
VPS37C-202ENST00000535818 FAM84BQ96KN1 310 aaPredicted RBP27.57■■■□□ 2
VPS37C-202ENST00000535818 MXD3Q9BW11 206 aa27.57■■■□□ 2
VPS37C-202ENST00000535818 TBC1D10BQ4KMP7 808 aaPredicted RBP27.56■■■□□ 2
VPS37C-202ENST00000535818 RBM26Q5T8P6 1007 aaKnown RBP27.56■■■□□ 2
VPS37C-202ENST00000535818 LPIN2Q92539 896 aa27.56■■■□□ 2
VPS37C-202ENST00000535818 ZNF646O15015 1829 aaPredicted RBP27.55■■■□□ 2
VPS37C-202ENST00000535818 USP17L8P0C7I0 530 aa27.55■■■□□ 2
VPS37C-202ENST00000535818 FGFR2P21802 821 aa27.55■■■□□ 2
VPS37C-202ENST00000535818 APLP1P51693 650 aa27.55■■■□□ 2
VPS37C-202ENST00000535818 ATP8B2P98198 1209 aa27.55■■■□□ 2
VPS37C-202ENST00000535818 PDE3AQ14432 1141 aa27.55■■■□□ 2
VPS37C-202ENST00000535818 GMLQ99445 158 aa27.55■■■□□ 2
VPS37C-202ENST00000535818 CHMP4BQ9H444 224 aaKnown RBP27.55■■■□□ 2
VPS37C-202ENST00000535818 ATP2B3Q16720 1220 aa27.54■■■□□ 2
VPS37C-202ENST00000535818 KIF4BQ2VIQ3 1234 aa27.54■■■□□ 2
VPS37C-202ENST00000535818 CNTROBQ8N137 903 aa27.54■■■□□ 2
VPS37C-202ENST00000535818 FRAT2O75474 233 aaPredicted RBP27.53■■■□□ 2
VPS37C-202ENST00000535818 G3BP1Q13283 466 aaKnown RBP eCLIP27.53■■■□□ 2
VPS37C-202ENST00000535818 OGFOD1Q8N543 542 aa27.53■■■□□ 2
VPS37C-202ENST00000535818 TDRD7Q8NHU6 1098 aaKnown RBP27.53■■■□□ 2
VPS37C-202ENST00000535818 JAG2Q9Y219 1238 aa27.53■■■□□ 2
VPS37C-202ENST00000535818 HIRAP54198 1017 aaPredicted RBP27.52■■■□□ 2
VPS37C-202ENST00000535818 POLA2Q14181 598 aa27.52■■■□□ 2
VPS37C-202ENST00000535818 C20orf194Q5TEA3 1177 aa27.52■■■□□ 2
VPS37C-202ENST00000535818 FBXO33Q7Z6M2 555 aa27.52■■■□□ 2
VPS37C-202ENST00000535818 SASH1O94885 1247 aa27.51■■□□□ 1.99
VPS37C-202ENST00000535818 EGFRP00533 1210 aa27.51■■□□□ 1.99
VPS37C-202ENST00000535818 BCAMP50895 628 aa27.51■■□□□ 1.99
VPS37C-202ENST00000535818 ZNF280AP59817 542 aaPredicted RBP27.51■■□□□ 1.99
VPS37C-202ENST00000535818 OS9Q13438 667 aaPredicted RBP27.51■■□□□ 1.99
VPS37C-202ENST00000535818 KIAA0825Q8IV33 1275 aa27.51■■□□□ 1.99
VPS37C-202ENST00000535818 SSH3Q8TE77 659 aa27.51■■□□□ 1.99
VPS37C-202ENST00000535818 ZC3H15Q8WU90 426 aaKnown RBP27.51■■□□□ 1.99
VPS37C-202ENST00000535818 HDAC9Q9UKV0 1011 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms