RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 KLHL34Q8N239 644 aa16.36■□□□□ 0.21
NEK4-207ENST00000535191 AGXT2Q9BYV1 514 aa16.36■□□□□ 0.21
NEK4-207ENST00000535191 CNNM1Q9NRU3 951 aa16.36■□□□□ 0.21
NEK4-207ENST00000535191 CTNNA3Q9UI47 895 aa16.36■□□□□ 0.21
NEK4-207ENST00000535191 ERVV-1B6SEH8 477 aa16.35■□□□□ 0.21
NEK4-207ENST00000535191 H3BQV1 296 aa16.35■□□□□ 0.21
NEK4-207ENST00000535191 IFFO2Q5TF58 517 aa16.35■□□□□ 0.21
NEK4-207ENST00000535191 DZIP3Q86Y13 1208 aaKnown RBP16.35■□□□□ 0.21
NEK4-207ENST00000535191 SMARCC2Q8TAQ2 1214 aa16.35■□□□□ 0.21
NEK4-207ENST00000535191 IL6STP40189 918 aaPredicted RBP16.35■□□□□ 0.21
NEK4-207ENST00000535191 SPATA32Q96LK8 384 aa16.35■□□□□ 0.21
NEK4-207ENST00000535191 ANO8Q9HCE9 1232 aaPredicted RBP16.35■□□□□ 0.21
NEK4-207ENST00000535191 NOL7Q9UMY1 257 aaKnown RBP16.35■□□□□ 0.21
NEK4-207ENST00000535191 PDE8AO60658 829 aa16.34■□□□□ 0.21
NEK4-207ENST00000535191 PI16Q6UXB8 463 aa16.34■□□□□ 0.21
NEK4-207ENST00000535191 CHST3Q7LGC8 479 aa16.34■□□□□ 0.21
NEK4-207ENST00000535191 APPBP2Q92624 585 aa16.34■□□□□ 0.21
NEK4-207ENST00000535191 GOLGA6L4A6NEF3 574 aa16.33■□□□□ 0.2
NEK4-207ENST00000535191 FGAP02671 866 aa16.33■□□□□ 0.2
NEK4-207ENST00000535191 HCLS1P14317 486 aaPredicted RBP16.33■□□□□ 0.2
NEK4-207ENST00000535191 CCT2P78371 535 aaKnown RBP16.33■□□□□ 0.2
NEK4-207ENST00000535191 NSUN7Q8NE18 718 aaKnown RBP16.33■□□□□ 0.2
NEK4-207ENST00000535191 LEO1Q8WVC0 666 aaPredicted RBP16.33■□□□□ 0.2
NEK4-207ENST00000535191 PUS7LQ9H0K6 701 aaKnown RBP16.33■□□□□ 0.2
NEK4-207ENST00000535191 ZSCAN16Q9H4T2 348 aaPredicted RBP16.33■□□□□ 0.2
NEK4-207ENST00000535191 CTDNEP1O95476 244 aa16.33■□□□□ 0.2
NEK4-207ENST00000535191 RESTQ13127 1097 aa16.33■□□□□ 0.2
NEK4-207ENST00000535191 ZNF274Q96GC6 653 aaPredicted RBP16.33■□□□□ 0.2
NEK4-207ENST00000535191 FUCA2Q9BTY2 467 aa16.33■□□□□ 0.2
NEK4-207ENST00000535191 CCDC39Q9UFE4 941 aa16.33■□□□□ 0.2
NEK4-207ENST00000535191 NAP1L2Q9ULW6 460 aaPredicted RBP16.33■□□□□ 0.2
NEK4-207ENST00000535191 ITGB4P16144 1822 aa16.33■□□□□ 0.2
NEK4-207ENST00000535191 FOXP2O15409 715 aa16.32■□□□□ 0.2
NEK4-207ENST00000535191 PDIA3P30101 505 aaKnown RBP16.32■□□□□ 0.2
NEK4-207ENST00000535191 MCAMP43121 646 aa16.32■□□□□ 0.2
NEK4-207ENST00000535191 IMMTQ16891 758 aaKnown RBP16.32■□□□□ 0.2
NEK4-207ENST00000535191 ZNF34Q8IZ26 560 aa16.32■□□□□ 0.2
NEK4-207ENST00000535191 ABCC12Q96J65 1359 aa16.32■□□□□ 0.2
NEK4-207ENST00000535191 PDE8BO95263 885 aa16.31■□□□□ 0.2
NEK4-207ENST00000535191 LIG1P18858 919 aa16.31■□□□□ 0.2
NEK4-207ENST00000535191 HMGN5P82970 282 aaKnown RBP16.31■□□□□ 0.2
NEK4-207ENST00000535191 ZNF512BQ96KM6 892 aaPredicted RBP16.31■□□□□ 0.2
NEK4-207ENST00000535191 HAND2P61296 217 aa16.31■□□□□ 0.2
NEK4-207ENST00000535191 VGLL2Q8N8G2 317 aa16.31■□□□□ 0.2
NEK4-207ENST00000535191 NAP1L5Q96NT1 182 aaPredicted RBP16.31■□□□□ 0.2
NEK4-207ENST00000535191 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.31■□□□□ 0.2
NEK4-207ENST00000535191 NCOA5Q9HCD5 579 aaKnown RBP16.31■□□□□ 0.2
NEK4-207ENST00000535191 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.31■□□□□ 0.2
NEK4-207ENST00000535191 LRP6O75581 1613 aa16.31■□□□□ 0.2
NEK4-207ENST00000535191 RIC1Q4ADV7 1423 aa16.31■□□□□ 0.2
NEK4-207ENST00000535191 PTPDC1A2A3K4 754 aa16.3■□□□□ 0.2
NEK4-207ENST00000535191 FBXL16Q8N461 479 aa16.3■□□□□ 0.2
NEK4-207ENST00000535191 CHMP4CQ96CF2 233 aa16.3■□□□□ 0.2
NEK4-207ENST00000535191 KIF3AQ9Y496 699 aa16.3■□□□□ 0.2
NEK4-207ENST00000535191 ROBO1Q9Y6N7 1651 aa16.3■□□□□ 0.2
NEK4-207ENST00000535191 NAA16Q6N069 864 aaPredicted RBP16.3■□□□□ 0.2
NEK4-207ENST00000535191 ZSCAN25Q6NSZ9 544 aa16.3■□□□□ 0.2
NEK4-207ENST00000535191 CDCA7Q9BWT1 371 aaPredicted RBP16.3■□□□□ 0.2
NEK4-207ENST00000535191 UBN2Q6ZU65 1347 aa16.3■□□□□ 0.2
NEK4-207ENST00000535191 SPEF2Q9C093 1822 aa16.3■□□□□ 0.2
NEK4-207ENST00000535191 GPAA1O43292 621 aa16.29■□□□□ 0.2
NEK4-207ENST00000535191 CFAP45Q9UL16 551 aa16.29■□□□□ 0.2
NEK4-207ENST00000535191 AHDC1Q5TGY3 1603 aaPredicted RBP16.29■□□□□ 0.2
NEK4-207ENST00000535191 A0A0G2JS52 829 aa16.29■□□□□ 0.2
NEK4-207ENST00000535191 EIF5P55010 431 aaKnown RBP16.29■□□□□ 0.2
NEK4-207ENST00000535191 TTF1Q15361 905 aaPredicted RBP16.29■□□□□ 0.2
NEK4-207ENST00000535191 PLCH1Q4KWH8 1693 aa16.29■□□□□ 0.2
NEK4-207ENST00000535191 SLC9C2Q5TAH2 1124 aa16.29■□□□□ 0.2
NEK4-207ENST00000535191 COL22A1Q8NFW1 1626 aaPredicted RBP16.29■□□□□ 0.2
NEK4-207ENST00000535191 NUP62CLQ9H1M0 184 aa16.29■□□□□ 0.2
NEK4-207ENST00000535191 USP25Q9UHP3 1055 aa16.29■□□□□ 0.2
NEK4-207ENST00000535191 ZKSCAN5Q9Y2L8 839 aa16.29■□□□□ 0.2
NEK4-207ENST00000535191 ZNF213O14771 459 aa16.28■□□□□ 0.2
NEK4-207ENST00000535191 ADAMTS2O95450 1211 aa16.28■□□□□ 0.2
NEK4-207ENST00000535191 PTMAP06454 111 aaKnown RBP16.28■□□□□ 0.2
NEK4-207ENST00000535191 CCDC192P0DO97 292 aa16.28■□□□□ 0.2
NEK4-207ENST00000535191 MCM5P33992 734 aa16.28■□□□□ 0.2
NEK4-207ENST00000535191 ADD2P35612 726 aa16.28■□□□□ 0.2
NEK4-207ENST00000535191 EVCP57679 992 aa16.28■□□□□ 0.2
NEK4-207ENST00000535191 DDB1Q16531 1140 aa16.28■□□□□ 0.2
NEK4-207ENST00000535191 CAMK4Q16566 473 aa16.28■□□□□ 0.2
NEK4-207ENST00000535191 INTS5Q6P9B9 1019 aaKnown RBP16.28■□□□□ 0.2
NEK4-207ENST00000535191 PGBD1Q96JS3 809 aa16.28■□□□□ 0.2
NEK4-207ENST00000535191 GPHNQ9NQX3 736 aaPredicted RBP16.28■□□□□ 0.2
NEK4-207ENST00000535191 DACT1Q9NYF0 836 aa16.28■□□□□ 0.2
NEK4-207ENST00000535191 FOSBP53539 338 aa16.28■□□□□ 0.2
NEK4-207ENST00000535191 MAP3K11Q16584 847 aa16.28■□□□□ 0.2
NEK4-207ENST00000535191 SUSD4Q5VX71 490 aa16.28■□□□□ 0.2
NEK4-207ENST00000535191 CCDC102BQ68D86 513 aa16.28■□□□□ 0.2
NEK4-207ENST00000535191 HELBQ8NG08 1087 aaPredicted RBP16.28■□□□□ 0.2
NEK4-207ENST00000535191 AK7Q96M32 723 aa16.28■□□□□ 0.2
NEK4-207ENST00000535191 KDM4AO75164 1064 aa16.27■□□□□ 0.2
NEK4-207ENST00000535191 PIH1D3Q9NQM4 214 aaKnown RBP16.27■□□□□ 0.2
NEK4-207ENST00000535191 CCDC87Q9NVE4 849 aa16.27■□□□□ 0.2
NEK4-207ENST00000535191 KAT6BQ8WYB5 2073 aa16.27■□□□□ 0.2
NEK4-207ENST00000535191 COL16A1Q07092 1604 aaPredicted RBP16.27■□□□□ 0.19
NEK4-207ENST00000535191 PRC1O43663 620 aa16.27■□□□□ 0.19
NEK4-207ENST00000535191 ZNF500O60304 480 aaPredicted RBP16.27■□□□□ 0.19
NEK4-207ENST00000535191 PPFIA3O75145 1194 aa16.27■□□□□ 0.19
NEK4-207ENST00000535191 ADCY5O95622 1261 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms