RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TXNRD3Q86VQ6 643 aa13.19□□□□□ -0.3
CAPN1-225ENST00000533704 ZC3H15Q8WU90 426 aaKnown RBP13.19□□□□□ -0.3
CAPN1-225ENST00000533704 CNNM1Q9NRU3 951 aa13.19□□□□□ -0.3
CAPN1-225ENST00000533704 SMC4Q9NTJ3 1288 aa13.19□□□□□ -0.3
CAPN1-225ENST00000533704 PTPRCP08575 1304 aa13.18□□□□□ -0.3
CAPN1-225ENST00000533704 SNAP23O00161 211 aa13.18□□□□□ -0.3
CAPN1-225ENST00000533704 CST9Q5W186 159 aa13.18□□□□□ -0.3
CAPN1-225ENST00000533704 CDC37L1Q7L3B6 337 aa13.18□□□□□ -0.3
CAPN1-225ENST00000533704 SUCLG2Q96I99 432 aa13.18□□□□□ -0.3
CAPN1-225ENST00000533704 MXD3Q9BW11 206 aa13.18□□□□□ -0.3
CAPN1-225ENST00000533704 PGAP2Q9UHJ9 254 aa13.18□□□□□ -0.3
CAPN1-225ENST00000533704 RASSF10A6NK89 507 aa13.17□□□□□ -0.3
CAPN1-225ENST00000533704 NBPF7P0C2Y1 421 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-225ENST00000533704 DLK2Q6UY11 383 aa13.17□□□□□ -0.3
CAPN1-225ENST00000533704 KRT26Q7Z3Y9 468 aa13.17□□□□□ -0.3
CAPN1-225ENST00000533704 AGBL3Q8NEM8 1001 aa13.17□□□□□ -0.3
CAPN1-225ENST00000533704 DCPSQ96C86 337 aaKnown RBP13.17□□□□□ -0.3
CAPN1-225ENST00000533704 COA1Q9GZY4 146 aa13.17□□□□□ -0.3
CAPN1-225ENST00000533704 ASTN2O75129 1339 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-225ENST00000533704 ADM5C9JUS6 153 aa13.16□□□□□ -0.3
CAPN1-225ENST00000533704 USP17L8P0C7I0 530 aa13.16□□□□□ -0.3
CAPN1-225ENST00000533704 DIEXFQ68CQ4 756 aaKnown RBP13.16□□□□□ -0.3
CAPN1-225ENST00000533704 CYP4F22Q6NT55 531 aa13.16□□□□□ -0.3
CAPN1-225ENST00000533704 LDHAL6AQ6ZMR3 332 aa13.16□□□□□ -0.3
CAPN1-225ENST00000533704 AIDAQ96BJ3 306 aa13.16□□□□□ -0.3
CAPN1-225ENST00000533704 CAPNS2Q96L46 248 aa13.16□□□□□ -0.3
CAPN1-225ENST00000533704 GGA3Q9NZ52 723 aa13.16□□□□□ -0.3
CAPN1-225ENST00000533704 WDR33Q9C0J8 1336 aaKnown RBP13.15□□□□□ -0.3
CAPN1-225ENST00000533704 ZNF280AP59817 542 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-225ENST00000533704 ALDH1L2Q3SY69 923 aa13.15□□□□□ -0.3
CAPN1-225ENST00000533704 DACT2Q5SW24 774 aa13.15□□□□□ -0.3
CAPN1-225ENST00000533704 SULF1Q8IWU6 871 aa13.15□□□□□ -0.3
CAPN1-225ENST00000533704 BICC1Q9H694 974 aaKnown RBP13.15□□□□□ -0.3
CAPN1-225ENST00000533704 TLL2Q9Y6L7 1015 aa13.15□□□□□ -0.3
CAPN1-225ENST00000533704 ECE1P42892 770 aa13.14□□□□□ -0.31
CAPN1-225ENST00000533704 GTF2IP78347 998 aa13.14□□□□□ -0.31
CAPN1-225ENST00000533704 SCARF1Q14162 830 aa13.14□□□□□ -0.31
CAPN1-225ENST00000533704 COL13A1Q5TAT6 717 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-225ENST00000533704 STRIP1Q5VSL9 837 aa13.14□□□□□ -0.31
CAPN1-225ENST00000533704 ANGEL2Q5VTE6 544 aaKnown RBP13.14□□□□□ -0.31
CAPN1-225ENST00000533704 TTLL5Q6EMB2 1281 aa13.14□□□□□ -0.31
CAPN1-225ENST00000533704 TRMT2AQ8IZ69 625 aaKnown RBP13.14□□□□□ -0.31
CAPN1-225ENST00000533704 MIER1Q8N108 512 aa13.14□□□□□ -0.31
CAPN1-225ENST00000533704 KAZALD1Q96I82 304 aa13.14□□□□□ -0.31
CAPN1-225ENST00000533704 GMLQ99445 158 aa13.14□□□□□ -0.31
CAPN1-225ENST00000533704 PUS3Q9BZE2 481 aaKnown RBP13.14□□□□□ -0.31
CAPN1-225ENST00000533704 MYOZ2Q9NPC6 264 aa13.14□□□□□ -0.31
CAPN1-225ENST00000533704 PCNTO95613 3336 aa13.14□□□□□ -0.31
CAPN1-225ENST00000533704 ZNF609O15014 1411 aa13.13□□□□□ -0.31
CAPN1-225ENST00000533704 ZNF804AQ7Z570 1209 aa13.13□□□□□ -0.31
CAPN1-225ENST00000533704 KIAA0825Q8IV33 1275 aa13.13□□□□□ -0.31
CAPN1-225ENST00000533704 OGFOD1Q8N543 542 aa13.13□□□□□ -0.31
CAPN1-225ENST00000533704 CD209Q9NNX6 404 aa13.13□□□□□ -0.31
CAPN1-225ENST00000533704 NOB1Q9ULX3 412 aaKnown RBP13.13□□□□□ -0.31
CAPN1-225ENST00000533704 SCAF8Q9UPN6 1271 aaKnown RBP13.13□□□□□ -0.31
CAPN1-225ENST00000533704 UTYO14607 1347 aa13.13□□□□□ -0.31
CAPN1-225ENST00000533704 MYO3BQ8WXR4 1341 aa13.13□□□□□ -0.31
CAPN1-225ENST00000533704 FOXN1O15353 648 aa13.12□□□□□ -0.31
CAPN1-225ENST00000533704 AOC2O75106 756 aa13.12□□□□□ -0.31
CAPN1-225ENST00000533704 SASH1O94885 1247 aa13.12□□□□□ -0.31
CAPN1-225ENST00000533704 HUNKP57058 714 aa13.12□□□□□ -0.31
CAPN1-225ENST00000533704 IFFO2Q5TF58 517 aa13.12□□□□□ -0.31
CAPN1-225ENST00000533704 SAPCD2Q86UD0 394 aa13.12□□□□□ -0.31
CAPN1-225ENST00000533704 ANKRD44Q8N8A2 993 aa13.12□□□□□ -0.31
CAPN1-225ENST00000533704 JAG2Q9Y219 1238 aa13.12□□□□□ -0.31
CAPN1-225ENST00000533704 THSD7BQ9C0I4 1608 aa13.11□□□□□ -0.31
CAPN1-225ENST00000533704 F8W031 263 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-225ENST00000533704 CT47B1P0C2W7 299 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-225ENST00000533704 NBPF9Q3BBW0 867 aa13.11□□□□□ -0.31
CAPN1-225ENST00000533704 C2orf69Q8N8R5 385 aa13.11□□□□□ -0.31
CAPN1-225ENST00000533704 KLHDC4Q8TBB5 520 aa13.11□□□□□ -0.31
CAPN1-225ENST00000533704 CDCA5Q96FF9 252 aa13.11□□□□□ -0.31
CAPN1-225ENST00000533704 USP44Q9H0E7 712 aa13.11□□□□□ -0.31
CAPN1-225ENST00000533704 GBA2Q9HCG7 927 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-225ENST00000533704 HDAC9Q9UKV0 1011 aa13.11□□□□□ -0.31
CAPN1-225ENST00000533704 MYH13Q9UKX3 1938 aa13.11□□□□□ -0.31
CAPN1-225ENST00000533704 ECM29Q5VYK3 1845 aa13.11□□□□□ -0.31
CAPN1-225ENST00000533704 HNRNPUQ00839 825 aaKnown RBP eCLIP13.1□□□□□ -0.31
CAPN1-225ENST00000533704 MAP2K1Q02750 393 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-225ENST00000533704 RABL6Q3YEC7 729 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-225ENST00000533704 LRRC24Q50LG9 513 aa13.1□□□□□ -0.31
CAPN1-225ENST00000533704 METTL24Q5JXM2 366 aa13.1□□□□□ -0.31
CAPN1-225ENST00000533704 C15orf52Q6ZUT6 534 aaKnown RBP13.1□□□□□ -0.31
CAPN1-225ENST00000533704 TNS4Q8IZW8 715 aa13.1□□□□□ -0.31
CAPN1-225ENST00000533704 BEGAINQ9BUH8 593 aa13.1□□□□□ -0.31
CAPN1-225ENST00000533704 API5Q9BZZ5 524 aaKnown RBP13.1□□□□□ -0.31
CAPN1-225ENST00000533704 WBP1LQ9NX94 342 aa13.1□□□□□ -0.31
CAPN1-225ENST00000533704 IRS2Q9Y4H2 1338 aa13.1□□□□□ -0.31
CAPN1-225ENST00000533704 UBTFL1P0CB47 393 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-225ENST00000533704 GYG1P46976 350 aa13.09□□□□□ -0.31
CAPN1-225ENST00000533704 CTCFP49711 727 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-225ENST00000533704 RARSP54136 660 aaKnown RBP13.09□□□□□ -0.31
CAPN1-225ENST00000533704 MROH5Q6ZUA9 1318 aa13.09□□□□□ -0.31
CAPN1-225ENST00000533704 ARAP2Q8WZ64 1704 aa13.08□□□□□ -0.32
CAPN1-225ENST00000533704 WNT10BO00744 389 aa13.08□□□□□ -0.32
CAPN1-225ENST00000533704 IL1R1P14778 569 aa13.08□□□□□ -0.32
CAPN1-225ENST00000533704 HIBADHP31937 336 aaKnown RBP13.08□□□□□ -0.32
CAPN1-225ENST00000533704 LBX1P52954 281 aa13.08□□□□□ -0.32
CAPN1-225ENST00000533704 UBE4AQ14139 1066 aa13.08□□□□□ -0.32
CAPN1-225ENST00000533704 PRAMEF18Q5VWM3 479 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms