RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 SIL1Q9H173 461 aa21.79■■□□□ 1.08
NXF1-217ENST00000533671 GPRC5DQ9NZD1 345 aa21.79■■□□□ 1.08
NXF1-217ENST00000533671 ZBTB12Q9Y330 459 aaPredicted RBP21.79■■□□□ 1.08
NXF1-217ENST00000533671 H7C1D1 291 aa21.78■■□□□ 1.08
NXF1-217ENST00000533671 EYA2O00167 538 aa21.78■■□□□ 1.08
NXF1-217ENST00000533671 SRGAP3O43295 1099 aa21.78■■□□□ 1.08
NXF1-217ENST00000533671 KLRK1P26718 216 aa21.78■■□□□ 1.08
NXF1-217ENST00000533671 RFX5P48382 616 aaPredicted RBP21.78■■□□□ 1.08
NXF1-217ENST00000533671 PTPN12Q05209 780 aaKnown RBP21.78■■□□□ 1.08
NXF1-217ENST00000533671 UBE4AQ14139 1066 aa21.78■■□□□ 1.08
NXF1-217ENST00000533671 ZNF804AQ7Z570 1209 aa21.78■■□□□ 1.08
NXF1-217ENST00000533671 USP17L3A6NCW0 530 aa21.77■■□□□ 1.08
NXF1-217ENST00000533671 USP17L4A6NCW7 530 aa21.77■■□□□ 1.08
NXF1-217ENST00000533671 RPS12P25398 132 aaKnown RBP21.77■■□□□ 1.08
NXF1-217ENST00000533671 USP17L1Q7RTZ2 530 aa21.77■■□□□ 1.08
NXF1-217ENST00000533671 LDHDQ86WU2 507 aa21.77■■□□□ 1.08
NXF1-217ENST00000533671 CNOT7Q9UIV1 285 aaKnown RBP21.77■■□□□ 1.08
NXF1-217ENST00000533671 CHADLQ6NUI6 762 aa21.76■■□□□ 1.07
NXF1-217ENST00000533671 DPF2Q92785 391 aa21.76■■□□□ 1.07
NXF1-217ENST00000533671 ADARB2Q9NS39 739 aaKnown RBP21.76■■□□□ 1.07
NXF1-217ENST00000533671 FBXO3Q9UK99 471 aa21.76■■□□□ 1.07
NXF1-217ENST00000533671 VIL1P09327 827 aaKnown RBP21.75■■□□□ 1.07
NXF1-217ENST00000533671 POTEIP0CG38 1075 aa21.75■■□□□ 1.07
NXF1-217ENST00000533671 POTEJP0CG39 1038 aa21.75■■□□□ 1.07
NXF1-217ENST00000533671 C15orf52Q6ZUT6 534 aaKnown RBP21.75■■□□□ 1.07
NXF1-217ENST00000533671 USP50Q70EL3 339 aaPredicted RBP21.75■■□□□ 1.07
NXF1-217ENST00000533671 CD209Q9NNX6 404 aa21.75■■□□□ 1.07
NXF1-217ENST00000533671 PA2G4Q9UQ80 394 aaKnown RBP21.75■■□□□ 1.07
NXF1-217ENST00000533671 ZBTB7BO15156 539 aaPredicted RBP21.74■■□□□ 1.07
NXF1-217ENST00000533671 PDE8BO95263 885 aa21.74■■□□□ 1.07
NXF1-217ENST00000533671 RSBN1LQ6PCB5 846 aaPredicted RBP21.74■■□□□ 1.07
NXF1-217ENST00000533671 VPS37DQ86XT2 251 aa21.74■■□□□ 1.07
NXF1-217ENST00000533671 MICALL2Q8IY33 904 aa21.74■■□□□ 1.07
NXF1-217ENST00000533671 CEP126Q9P2H0 1117 aa21.74■■□□□ 1.07
NXF1-217ENST00000533671 CIAO1O76071 339 aa21.73■■□□□ 1.07
NXF1-217ENST00000533671 MTX1Q13505 466 aa21.73■■□□□ 1.07
NXF1-217ENST00000533671 CAVIN4Q5BKX8 364 aa21.73■■□□□ 1.07
NXF1-217ENST00000533671 TTLL5Q6EMB2 1281 aa21.73■■□□□ 1.07
NXF1-217ENST00000533671 C1orf115Q9H7X2 142 aa21.73■■□□□ 1.07
NXF1-217ENST00000533671 COPRSQ9NQ92 184 aa21.73■■□□□ 1.07
NXF1-217ENST00000533671 COG6Q9Y2V7 657 aa21.73■■□□□ 1.07
NXF1-217ENST00000533671 IFIT1P09914 478 aaKnown RBP21.72■■□□□ 1.07
NXF1-217ENST00000533671 HSPA6P17066 643 aa21.72■■□□□ 1.07
NXF1-217ENST00000533671 HIBADHP31937 336 aaKnown RBP21.72■■□□□ 1.07
NXF1-217ENST00000533671 IL15P40933 162 aaPredicted RBP21.72■■□□□ 1.07
NXF1-217ENST00000533671 GTF2IP78347 998 aa21.72■■□□□ 1.07
NXF1-217ENST00000533671 MVPQ14764 893 aaKnown RBP21.72■■□□□ 1.07
NXF1-217ENST00000533671 PUM3Q15397 648 aaKnown RBP21.72■■□□□ 1.07
NXF1-217ENST00000533671 STRIP1Q5VSL9 837 aa21.72■■□□□ 1.07
NXF1-217ENST00000533671 AGBL3Q8NEM8 1001 aa21.72■■□□□ 1.07
NXF1-217ENST00000533671 CHMP4BQ9H444 224 aaKnown RBP21.72■■□□□ 1.07
NXF1-217ENST00000533671 DDX19BQ9UMR2 479 aa21.72■■□□□ 1.07
NXF1-217ENST00000533671 SLC5A1P13866 664 aa21.71■■□□□ 1.07
NXF1-217ENST00000533671 GYG1P46976 350 aa21.71■■□□□ 1.07
NXF1-217ENST00000533671 RBM26Q5T8P6 1007 aaKnown RBP21.71■■□□□ 1.07
NXF1-217ENST00000533671 ATG9AQ7Z3C6 839 aa21.71■■□□□ 1.07
NXF1-217ENST00000533671 VGLL2Q8N8G2 317 aa21.71■■□□□ 1.07
NXF1-217ENST00000533671 FRAT2O75474 233 aaPredicted RBP21.7■■□□□ 1.06
NXF1-217ENST00000533671 MYO3BQ8WXR4 1341 aa21.7■■□□□ 1.06
NXF1-217ENST00000533671 IRS2Q9Y4H2 1338 aa21.7■■□□□ 1.06
NXF1-217ENST00000533671 PNMA6EA0A0J9YXQ4 647 aa21.69■■□□□ 1.06
NXF1-217ENST00000533671 SHTN1A0MZ66 631 aa21.69■■□□□ 1.06
NXF1-217ENST00000533671 IL1R1P14778 569 aa21.69■■□□□ 1.06
NXF1-217ENST00000533671 ATP8B2P98198 1209 aa21.69■■□□□ 1.06
NXF1-217ENST00000533671 G3BP1Q13283 466 aaKnown RBP eCLIP21.69■■□□□ 1.06
NXF1-217ENST00000533671 PDE3AQ14432 1141 aa21.69■■□□□ 1.06
NXF1-217ENST00000533671 DACT2Q5SW24 774 aa21.69■■□□□ 1.06
NXF1-217ENST00000533671 ADAMTSL1Q8N6G6 1762 aa21.69■■□□□ 1.06
NXF1-217ENST00000533671 USP17L8P0C7I0 530 aa21.68■■□□□ 1.06
NXF1-217ENST00000533671 ATP2B3Q16720 1220 aa21.68■■□□□ 1.06
NXF1-217ENST00000533671 TBC1D10BQ4KMP7 808 aaPredicted RBP21.68■■□□□ 1.06
NXF1-217ENST00000533671 MAP1SQ66K74 1059 aaPredicted RBP21.68■■□□□ 1.06
NXF1-217ENST00000533671 SAMD7Q7Z3H4 446 aa21.68■■□□□ 1.06
NXF1-217ENST00000533671 LPIN2Q92539 896 aa21.68■■□□□ 1.06
NXF1-217ENST00000533671 FAM84BQ96KN1 310 aaPredicted RBP21.68■■□□□ 1.06
NXF1-217ENST00000533671 MXD3Q9BW11 206 aa21.68■■□□□ 1.06
NXF1-217ENST00000533671 MYH13Q9UKX3 1938 aa21.67■■□□□ 1.06
NXF1-217ENST00000533671 OS9Q13438 667 aaPredicted RBP21.67■■□□□ 1.06
NXF1-217ENST00000533671 CNTROBQ8N137 903 aa21.67■■□□□ 1.06
NXF1-217ENST00000533671 OGFOD1Q8N543 542 aa21.67■■□□□ 1.06
NXF1-217ENST00000533671 TRPM4Q8TD43 1214 aa21.67■■□□□ 1.06
NXF1-217ENST00000533671 ZNF646O15015 1829 aaPredicted RBP21.66■■□□□ 1.06
NXF1-217ENST00000533671 FGFR2P21802 821 aa21.66■■□□□ 1.06
NXF1-217ENST00000533671 APLP1P51693 650 aa21.66■■□□□ 1.06
NXF1-217ENST00000533671 KIF4BQ2VIQ3 1234 aa21.66■■□□□ 1.06
NXF1-217ENST00000533671 HDAC9Q9UKV0 1011 aa21.66■■□□□ 1.06
NXF1-217ENST00000533671 JAG2Q9Y219 1238 aa21.66■■□□□ 1.06
NXF1-217ENST00000533671 ZNF609O15014 1411 aa21.65■■□□□ 1.06
NXF1-217ENST00000533671 SASH1O94885 1247 aa21.65■■□□□ 1.06
NXF1-217ENST00000533671 C20orf194Q5TEA3 1177 aa21.65■■□□□ 1.06
NXF1-217ENST00000533671 FBXO33Q7Z6M2 555 aa21.65■■□□□ 1.06
NXF1-217ENST00000533671 TDRD7Q8NHU6 1098 aaKnown RBP21.65■■□□□ 1.06
NXF1-217ENST00000533671 GMLQ99445 158 aa21.65■■□□□ 1.06
NXF1-217ENST00000533671 IQSEC3Q9UPP2 1182 aaPredicted RBP21.65■■□□□ 1.06
NXF1-217ENST00000533671 AKAP2Q9Y2D5 859 aa21.65■■□□□ 1.06
NXF1-217ENST00000533671 POLR2AP24928 1970 aaKnown RBP21.65■■□□□ 1.06
NXF1-217ENST00000533671 BCAMP50895 628 aa21.64■■□□□ 1.05
NXF1-217ENST00000533671 CHAF1AQ13111 956 aaPredicted RBP21.64■■□□□ 1.05
NXF1-217ENST00000533671 POLA2Q14181 598 aa21.64■■□□□ 1.05
NXF1-217ENST00000533671 KIAA0825Q8IV33 1275 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms