RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 NEUROD6Q96NK8 337 aa14.66□□□□□ -0.06
COMMD9-208ENST00000533643 PSMD1Q99460 953 aa14.66□□□□□ -0.06
COMMD9-208ENST00000533643 CCDC8Q9H0W5 538 aaPredicted RBP14.66□□□□□ -0.06
COMMD9-208ENST00000533643 ZBTB47Q9UFB7 747 aaPredicted RBP14.66□□□□□ -0.06
COMMD9-208ENST00000533643 GOLGB1Q14789 3259 aaKnown RBP14.65□□□□□ -0.06
COMMD9-208ENST00000533643 IFIT1P09914 478 aaKnown RBP14.65□□□□□ -0.06
COMMD9-208ENST00000533643 FKBP4Q02790 459 aaKnown RBP eCLIP14.65□□□□□ -0.06
COMMD9-208ENST00000533643 C15orf52Q6ZUT6 534 aaKnown RBP14.65□□□□□ -0.06
COMMD9-208ENST00000533643 TXNRD3Q86VQ6 643 aa14.65□□□□□ -0.06
COMMD9-208ENST00000533643 OTUD7AQ8TE49 926 aaPredicted RBP14.65□□□□□ -0.06
COMMD9-208ENST00000533643 XAGE2Q96GT9 111 aa14.65□□□□□ -0.06
COMMD9-208ENST00000533643 TLR7Q9NYK1 1049 aaKnown RBP14.65□□□□□ -0.06
COMMD9-208ENST00000533643 ARFGEF1Q9Y6D6 1849 aa14.64□□□□□ -0.07
COMMD9-208ENST00000533643 IFIT2P09913 472 aaKnown RBP14.64□□□□□ -0.07
COMMD9-208ENST00000533643 GPR162Q16538 588 aa14.64□□□□□ -0.07
COMMD9-208ENST00000533643 ARHGAP27Q6ZUM4 889 aa14.64□□□□□ -0.07
COMMD9-208ENST00000533643 SUPT20HQ8NEM7 779 aa14.64□□□□□ -0.07
COMMD9-208ENST00000533643 FAM84BQ96KN1 310 aaPredicted RBP14.64□□□□□ -0.07
COMMD9-208ENST00000533643 DBNDD2Q9BQY9 259 aa14.64□□□□□ -0.07
COMMD9-208ENST00000533643 DBNLQ9UJU6 430 aaKnown RBP14.64□□□□□ -0.07
COMMD9-208ENST00000533643 MED23Q9ULK4 1368 aa14.63□□□□□ -0.07
COMMD9-208ENST00000533643 RIMBP2O15034 1052 aa14.63□□□□□ -0.07
COMMD9-208ENST00000533643 PDE4AP27815 886 aa14.63□□□□□ -0.07
COMMD9-208ENST00000533643 GYG1P46976 350 aa14.63□□□□□ -0.07
COMMD9-208ENST00000533643 BCAMP50895 628 aa14.63□□□□□ -0.07
COMMD9-208ENST00000533643 WASHC4Q2M389 1173 aa14.63□□□□□ -0.07
COMMD9-208ENST00000533643 FBXO33Q7Z6M2 555 aa14.63□□□□□ -0.07
COMMD9-208ENST00000533643 EYA3Q99504 573 aa14.63□□□□□ -0.07
COMMD9-208ENST00000533643 TAOK3Q9H2K8 898 aa14.63□□□□□ -0.07
COMMD9-208ENST00000533643 ZNF277Q9NRM2 450 aaPredicted RBP14.63□□□□□ -0.07
COMMD9-208ENST00000533643 LTBP3Q9NS15 1303 aa14.63□□□□□ -0.07
COMMD9-208ENST00000533643 PRELPP51888 382 aa14.62□□□□□ -0.07
COMMD9-208ENST00000533643 RASSF7Q02833 373 aa14.62□□□□□ -0.07
COMMD9-208ENST00000533643 KIAA2012Q0VF49 1180 aa14.62□□□□□ -0.07
COMMD9-208ENST00000533643 GORABQ5T7V8 394 aa14.62□□□□□ -0.07
COMMD9-208ENST00000533643 ZC3H12CQ9C0D7 883 aaKnown RBP14.62□□□□□ -0.07
COMMD9-208ENST00000533643 SALL3Q9BXA9 1300 aa14.62□□□□□ -0.07
COMMD9-208ENST00000533643 FER1L6Q2WGJ9 1857 aa14.61□□□□□ -0.07
COMMD9-208ENST00000533643 HIBADHP31937 336 aaKnown RBP14.61□□□□□ -0.07
COMMD9-208ENST00000533643 PHKA1P46020 1223 aa14.61□□□□□ -0.07
COMMD9-208ENST00000533643 AOC3Q16853 763 aa14.61□□□□□ -0.07
COMMD9-208ENST00000533643 CAVIN4Q5BKX8 364 aa14.61□□□□□ -0.07
COMMD9-208ENST00000533643 CCDC102BQ68D86 513 aa14.61□□□□□ -0.07
COMMD9-208ENST00000533643 SKAP1Q86WV1 359 aa14.61□□□□□ -0.07
COMMD9-208ENST00000533643 VPS33BQ9H267 617 aa14.61□□□□□ -0.07
COMMD9-208ENST00000533643 PPIP5K2O43314 1243 aa14.6□□□□□ -0.07
COMMD9-208ENST00000533643 GRIN3BO60391 1043 aa14.6□□□□□ -0.07
COMMD9-208ENST00000533643 IARSP41252 1262 aaKnown RBP14.6□□□□□ -0.07
COMMD9-208ENST00000533643 DOK7Q18PE1 504 aa14.6□□□□□ -0.07
COMMD9-208ENST00000533643 ZNF804AQ7Z570 1209 aa14.6□□□□□ -0.07
COMMD9-208ENST00000533643 PLEKHM2Q8IWE5 1019 aa14.6□□□□□ -0.07
COMMD9-208ENST00000533643 STAP2Q9UGK3 403 aa14.6□□□□□ -0.07
COMMD9-208ENST00000533643 ARAP2Q8WZ64 1704 aa14.59□□□□□ -0.07
COMMD9-208ENST00000533643 MX1P20591 662 aa14.59□□□□□ -0.07
COMMD9-208ENST00000533643 PDE1AP54750 535 aa14.59□□□□□ -0.07
COMMD9-208ENST00000533643 CCDC158Q5M9N0 1113 aa14.59□□□□□ -0.07
COMMD9-208ENST00000533643 TTC39AQ5SRH9 613 aa14.59□□□□□ -0.07
COMMD9-208ENST00000533643 TSHZ3Q63HK5 1081 aa14.59□□□□□ -0.07
COMMD9-208ENST00000533643 VPS37DQ86XT2 251 aa14.59□□□□□ -0.07
COMMD9-208ENST00000533643 LARGE2Q8N3Y3 721 aa14.59□□□□□ -0.07
COMMD9-208ENST00000533643 COA1Q9GZY4 146 aa14.59□□□□□ -0.07
COMMD9-208ENST00000533643 ECHDC1Q9NTX5 307 aa14.59□□□□□ -0.07
COMMD9-208ENST00000533643 IL1R1P14778 569 aa14.58□□□□□ -0.08
COMMD9-208ENST00000533643 ATP5JP18859 108 aa14.58□□□□□ -0.08
COMMD9-208ENST00000533643 ARID4AP29374 1257 aaPredicted RBP14.58□□□□□ -0.08
COMMD9-208ENST00000533643 TDRD7Q8NHU6 1098 aaKnown RBP14.58□□□□□ -0.08
COMMD9-208ENST00000533643 GPATCH3Q96I76 525 aa14.58□□□□□ -0.08
COMMD9-208ENST00000533643 ZNF512BQ96KM6 892 aaPredicted RBP14.58□□□□□ -0.08
COMMD9-208ENST00000533643 DBNDD1Q9H9R9 158 aa14.58□□□□□ -0.08
COMMD9-208ENST00000533643 CD209Q9NNX6 404 aa14.58□□□□□ -0.08
COMMD9-208ENST00000533643 GNL3LQ9NVN8 582 aaKnown RBP14.58□□□□□ -0.08
COMMD9-208ENST00000533643 IQSEC3Q9UPP2 1182 aaPredicted RBP14.58□□□□□ -0.08
COMMD9-208ENST00000533643 COL4A5P29400 1685 aa14.58□□□□□ -0.08
COMMD9-208ENST00000533643 ECE2O60344 883 aa14.57□□□□□ -0.08
COMMD9-208ENST00000533643 UQCRFS1P1P0C7P4 283 aa14.57□□□□□ -0.08
COMMD9-208ENST00000533643 LMNB1P20700 586 aa14.57□□□□□ -0.08
COMMD9-208ENST00000533643 SCARF1Q14162 830 aa14.57□□□□□ -0.08
COMMD9-208ENST00000533643 PI4K2BQ8TCG2 481 aa14.57□□□□□ -0.08
COMMD9-208ENST00000533643 OSBPL3Q9H4L5 887 aa14.57□□□□□ -0.08
COMMD9-208ENST00000533643 TTC41PQ6P2S7 1318 aa14.57□□□□□ -0.08
COMMD9-208ENST00000533643 YDJCA8MPS7 323 aa14.56□□□□□ -0.08
COMMD9-208ENST00000533643 G3V3G9 751 aa14.56□□□□□ -0.08
COMMD9-208ENST00000533643 ZBTB22O15209 634 aa14.56□□□□□ -0.08
COMMD9-208ENST00000533643 MCAMP43121 646 aa14.56□□□□□ -0.08
COMMD9-208ENST00000533643 RASGRF1Q13972 1273 aa14.56□□□□□ -0.08
COMMD9-208ENST00000533643 DCAF8Q5TAQ9 597 aa14.56□□□□□ -0.08
COMMD9-208ENST00000533643 KCNQ5Q9NR82 932 aa14.56□□□□□ -0.08
COMMD9-208ENST00000533643 RGS3P49796 1198 aa14.55□□□□□ -0.08
COMMD9-208ENST00000533643 PI16Q6UXB8 463 aa14.55□□□□□ -0.08
COMMD9-208ENST00000533643 PODNQ7Z5L7 613 aa14.55□□□□□ -0.08
COMMD9-208ENST00000533643 NIM1KQ8IY84 436 aa14.55□□□□□ -0.08
COMMD9-208ENST00000533643 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.55□□□□□ -0.08
COMMD9-208ENST00000533643 SNRKQ9NRH2 765 aa14.55□□□□□ -0.08
COMMD9-208ENST00000533643 HMG20BQ9P0W2 317 aa14.55□□□□□ -0.08
COMMD9-208ENST00000533643 ZNRF3Q9ULT6 936 aa14.55□□□□□ -0.08
COMMD9-208ENST00000533643 AOX1Q06278 1338 aa14.55□□□□□ -0.08
COMMD9-208ENST00000533643 SEMA3EO15041 775 aa14.54□□□□□ -0.08
COMMD9-208ENST00000533643 ERC2O15083 957 aa14.54□□□□□ -0.08
COMMD9-208ENST00000533643 FRAT2O75474 233 aaPredicted RBP14.54□□□□□ -0.08
COMMD9-208ENST00000533643 GLRX3O76003 335 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms