RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 WTIPA6NIX2 430 aaPredicted RBP15.75■□□□□ 0.11
CAPRIN1-213ENST00000533562 KCNJ4P48050 445 aa15.75■□□□□ 0.11
CAPRIN1-213ENST00000533562 IFIT5Q13325 482 aaKnown RBP15.75■□□□□ 0.11
CAPRIN1-213ENST00000533562 GMLQ99445 158 aa15.75■□□□□ 0.11
CAPRIN1-213ENST00000533562 SCN9AQ15858 1988 aa15.75■□□□□ 0.11
CAPRIN1-213ENST00000533562 LBX1P52954 281 aa15.74■□□□□ 0.11
CAPRIN1-213ENST00000533562 SCARF1Q14162 830 aa15.74■□□□□ 0.11
CAPRIN1-213ENST00000533562 STRIP1Q5VSL9 837 aa15.74■□□□□ 0.11
CAPRIN1-213ENST00000533562 OGFOD1Q8N543 542 aa15.74■□□□□ 0.11
CAPRIN1-213ENST00000533562 C2orf69Q8N8R5 385 aa15.74■□□□□ 0.11
CAPRIN1-213ENST00000533562 MYOZ2Q9NPC6 264 aa15.74■□□□□ 0.11
CAPRIN1-213ENST00000533562 C9orf78Q9NZ63 289 aaPredicted RBP15.74■□□□□ 0.11
CAPRIN1-213ENST00000533562 CHMP3Q9Y3E7 222 aa15.74■□□□□ 0.11
CAPRIN1-213ENST00000533562 POLR2AP24928 1970 aaKnown RBP15.74■□□□□ 0.11
CAPRIN1-213ENST00000533562 GRM8O00222 908 aa15.73■□□□□ 0.11
CAPRIN1-213ENST00000533562 ALDH1L1O75891 902 aa15.73■□□□□ 0.11
CAPRIN1-213ENST00000533562 MMP14P50281 582 aa15.73■□□□□ 0.11
CAPRIN1-213ENST00000533562 HUNKP57058 714 aa15.73■□□□□ 0.11
CAPRIN1-213ENST00000533562 FOXO4P98177 505 aa15.73■□□□□ 0.11
CAPRIN1-213ENST00000533562 SLC4A10Q6U841 1118 aa15.73■□□□□ 0.11
CAPRIN1-213ENST00000533562 GGA3Q9NZ52 723 aa15.73■□□□□ 0.11
CAPRIN1-213ENST00000533562 ZNF609O15014 1411 aa15.73■□□□□ 0.11
CAPRIN1-213ENST00000533562 MYO3BQ8WXR4 1341 aa15.72■□□□□ 0.11
CAPRIN1-213ENST00000533562 ZNF521Q96K83 1311 aa15.72■□□□□ 0.11
CAPRIN1-213ENST00000533562 AOC2O75106 756 aa15.72■□□□□ 0.11
CAPRIN1-213ENST00000533562 CAPN15O75808 1086 aa15.72■□□□□ 0.11
CAPRIN1-213ENST00000533562 CHRNDQ07001 517 aa15.72■□□□□ 0.11
CAPRIN1-213ENST00000533562 CCDC57Q2TAC2 916 aa15.72■□□□□ 0.11
CAPRIN1-213ENST00000533562 DACT2Q5SW24 774 aa15.72■□□□□ 0.11
CAPRIN1-213ENST00000533562 TTLL5Q6EMB2 1281 aa15.72■□□□□ 0.11
CAPRIN1-213ENST00000533562 LMBR1LQ6UX01 489 aa15.72■□□□□ 0.11
CAPRIN1-213ENST00000533562 DLK2Q6UY11 383 aa15.72■□□□□ 0.11
CAPRIN1-213ENST00000533562 TXNRD3Q86VQ6 643 aa15.72■□□□□ 0.11
CAPRIN1-213ENST00000533562 FBXW7Q969H0 707 aa15.72■□□□□ 0.11
CAPRIN1-213ENST00000533562 SRCIN1Q9C0H9 1055 aa15.72■□□□□ 0.11
CAPRIN1-213ENST00000533562 GBA2Q9HCG7 927 aaPredicted RBP15.72■□□□□ 0.11
CAPRIN1-213ENST00000533562 ADM5C9JUS6 153 aa15.71■□□□□ 0.11
CAPRIN1-213ENST00000533562 E9PSI1 815 aa15.71■□□□□ 0.11
CAPRIN1-213ENST00000533562 NPM3O75607 178 aaKnown RBP15.71■□□□□ 0.11
CAPRIN1-213ENST00000533562 HSPA8P11142 646 aaKnown RBP15.71■□□□□ 0.11
CAPRIN1-213ENST00000533562 NOGQ13253 232 aa15.71■□□□□ 0.11
CAPRIN1-213ENST00000533562 TAF7LQ5H9L4 462 aa15.71■□□□□ 0.11
CAPRIN1-213ENST00000533562 ANGEL2Q5VTE6 544 aaKnown RBP15.71■□□□□ 0.11
CAPRIN1-213ENST00000533562 CA12O43570 354 aa15.7■□□□□ 0.1
CAPRIN1-213ENST00000533562 BRPF1P55201 1214 aaPredicted RBP15.7■□□□□ 0.1
CAPRIN1-213ENST00000533562 RGMBQ6NW40 437 aa15.7■□□□□ 0.1
CAPRIN1-213ENST00000533562 LDHAL6AQ6ZMR3 332 aa15.7■□□□□ 0.1
CAPRIN1-213ENST00000533562 CCDC102AQ96A19 550 aa15.7■□□□□ 0.1
CAPRIN1-213ENST00000533562 ASTN2O75129 1339 aaPredicted RBP15.69■□□□□ 0.1
CAPRIN1-213ENST00000533562 PITPNM2Q9BZ72 1349 aa15.69■□□□□ 0.1
CAPRIN1-213ENST00000533562 TAF5LO75529 589 aa15.69■□□□□ 0.1
CAPRIN1-213ENST00000533562 CD209Q9NNX6 404 aa15.69■□□□□ 0.1
CAPRIN1-213ENST00000533562 HDAC9Q9UKV0 1011 aa15.69■□□□□ 0.1
CAPRIN1-213ENST00000533562 SPEF2Q9C093 1822 aa15.68■□□□□ 0.1
CAPRIN1-213ENST00000533562 KLRK1P26718 216 aa15.68■□□□□ 0.1
CAPRIN1-213ENST00000533562 GTF2IP78347 998 aa15.68■□□□□ 0.1
CAPRIN1-213ENST00000533562 EPHA10Q5JZY3 1008 aa15.68■□□□□ 0.1
CAPRIN1-213ENST00000533562 C15orf52Q6ZUT6 534 aaKnown RBP15.68■□□□□ 0.1
CAPRIN1-213ENST00000533562 HELBQ8NG08 1087 aaPredicted RBP15.68■□□□□ 0.1
CAPRIN1-213ENST00000533562 CDCA5Q96FF9 252 aa15.68■□□□□ 0.1
CAPRIN1-213ENST00000533562 MXD3Q9BW11 206 aa15.68■□□□□ 0.1
CAPRIN1-213ENST00000533562 CNNM1Q9NRU3 951 aa15.68■□□□□ 0.1
CAPRIN1-213ENST00000533562 PSME4Q14997 1843 aa15.68■□□□□ 0.1
CAPRIN1-213ENST00000533562 ZNF157P51786 506 aaPredicted RBP15.67■□□□□ 0.1
CAPRIN1-213ENST00000533562 NBPF9Q3BBW0 867 aa15.67■□□□□ 0.1
CAPRIN1-213ENST00000533562 MRPL50Q8N5N7 158 aaKnown RBP15.67■□□□□ 0.1
CAPRIN1-213ENST00000533562 PTPRCP08575 1304 aa15.67■□□□□ 0.1
CAPRIN1-213ENST00000533562 WNT10BO00744 389 aa15.66■□□□□ 0.1
CAPRIN1-213ENST00000533562 PLIN1O60240 522 aa15.66■□□□□ 0.1
CAPRIN1-213ENST00000533562 FKBP1BP68106 108 aa15.66■□□□□ 0.1
CAPRIN1-213ENST00000533562 SLFN5Q08AF3 891 aa15.66■□□□□ 0.1
CAPRIN1-213ENST00000533562 ZNF804AQ7Z570 1209 aa15.66■□□□□ 0.1
CAPRIN1-213ENST00000533562 ZNF594Q96JF6 807 aaPredicted RBP15.66■□□□□ 0.1
CAPRIN1-213ENST00000533562 THSD7BQ9C0I4 1608 aa15.65■□□□□ 0.1
CAPRIN1-213ENST00000533562 SNAP23O00161 211 aa15.65■□□□□ 0.1
CAPRIN1-213ENST00000533562 NBPF7P0C2Y1 421 aaPredicted RBP15.65■□□□□ 0.1
CAPRIN1-213ENST00000533562 KIAA0825Q8IV33 1275 aa15.65■□□□□ 0.1
CAPRIN1-213ENST00000533562 UTYO14607 1347 aa15.65■□□□□ 0.1
CAPRIN1-213ENST00000533562 FAM155AB1AL88 458 aaPredicted RBP15.64■□□□□ 0.09
CAPRIN1-213ENST00000533562 IL1R1P14778 569 aa15.64■□□□□ 0.09
CAPRIN1-213ENST00000533562 NF2P35240 595 aa15.64■□□□□ 0.09
CAPRIN1-213ENST00000533562 SSH1Q8WYL5 1049 aa15.64■□□□□ 0.09
CAPRIN1-213ENST00000533562 SUCLG2Q96I99 432 aa15.64■□□□□ 0.09
CAPRIN1-213ENST00000533562 UBE4AQ14139 1066 aa15.63■□□□□ 0.09
CAPRIN1-213ENST00000533562 REM2Q8IYK8 340 aaPredicted RBP15.63■□□□□ 0.09
CAPRIN1-213ENST00000533562 ZIC5Q96T25 663 aa15.63■□□□□ 0.09
CAPRIN1-213ENST00000533562 TSKSQ9UJT2 592 aa15.63■□□□□ 0.09
CAPRIN1-213ENST00000533562 IRS2Q9Y4H2 1338 aa15.63■□□□□ 0.09
CAPRIN1-213ENST00000533562 SASH1O94885 1247 aa15.62■□□□□ 0.09
CAPRIN1-213ENST00000533562 FKBP1AP62942 108 aaKnown RBP15.62■□□□□ 0.09
CAPRIN1-213ENST00000533562 KIF23Q02241 960 aaPredicted RBP15.62■□□□□ 0.09
CAPRIN1-213ENST00000533562 DLGAP5Q15398 846 aa15.62■□□□□ 0.09
CAPRIN1-213ENST00000533562 ALDH1L2Q3SY69 923 aa15.62■□□□□ 0.09
CAPRIN1-213ENST00000533562 APOBEC3FQ8IUX4 373 aaKnown RBP15.62■□□□□ 0.09
CAPRIN1-213ENST00000533562 KAZALD1Q96I82 304 aa15.62■□□□□ 0.09
CAPRIN1-213ENST00000533562 BICC1Q9H694 974 aaKnown RBP15.62■□□□□ 0.09
CAPRIN1-213ENST00000533562 SCAF8Q9UPN6 1271 aaKnown RBP15.62■□□□□ 0.09
CAPRIN1-213ENST00000533562 CCER2I3L3R5 266 aa15.61■□□□□ 0.09
CAPRIN1-213ENST00000533562 SLC10A3P09131 477 aa15.61■□□□□ 0.09
CAPRIN1-213ENST00000533562 TTLL12Q14166 644 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms