RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 ZSCAN30Q86W11 494 aa22.84■■□□□ 1.25
UBXN1-215ENST00000533476 KRT85P78386 507 aa22.83■■□□□ 1.25
UBXN1-215ENST00000533476 DZIP3Q86Y13 1208 aaKnown RBP22.83■■□□□ 1.25
UBXN1-215ENST00000533476 BRF1Q92994 677 aa22.83■■□□□ 1.25
UBXN1-215ENST00000533476 OSBP2Q969R2 916 aa22.83■■□□□ 1.25
UBXN1-215ENST00000533476 AGXT2Q9BYV1 514 aa22.83■■□□□ 1.25
UBXN1-215ENST00000533476 TRMT112Q9UI30 125 aaKnown RBP22.83■■□□□ 1.25
UBXN1-215ENST00000533476 MYH7P12883 1935 aa22.83■■□□□ 1.24
UBXN1-215ENST00000533476 PFKFB2O60825 505 aa22.82■■□□□ 1.24
UBXN1-215ENST00000533476 EXOSC10Q01780 885 aaKnown RBP22.82■■□□□ 1.24
UBXN1-215ENST00000533476 SCARF1Q14162 830 aa22.82■■□□□ 1.24
UBXN1-215ENST00000533476 LDHAL6AQ6ZMR3 332 aa22.82■■□□□ 1.24
UBXN1-215ENST00000533476 LLPHQ9BRT6 129 aaKnown RBP22.82■■□□□ 1.24
UBXN1-215ENST00000533476 ELP1O95163 1332 aa22.82■■□□□ 1.24
UBXN1-215ENST00000533476 E7EWF7 191 aa22.82■■□□□ 1.24
UBXN1-215ENST00000533476 PDE8AO60658 829 aa22.82■■□□□ 1.24
UBXN1-215ENST00000533476 ZNF512BQ96KM6 892 aaPredicted RBP22.82■■□□□ 1.24
UBXN1-215ENST00000533476 THRAP3Q9Y2W1 955 aaKnown RBP22.82■■□□□ 1.24
UBXN1-215ENST00000533476 CICQ96RK0 1608 aaPredicted RBP22.81■■□□□ 1.24
UBXN1-215ENST00000533476 RREB1Q92766 1687 aa22.81■■□□□ 1.24
UBXN1-215ENST00000533476 FGD1P98174 961 aa22.81■■□□□ 1.24
UBXN1-215ENST00000533476 ZNF34Q8IZ26 560 aa22.81■■□□□ 1.24
UBXN1-215ENST00000533476 VGLL2Q8N8G2 317 aa22.81■■□□□ 1.24
UBXN1-215ENST00000533476 SPATA31A1Q5TZJ5 1347 aa22.81■■□□□ 1.24
UBXN1-215ENST00000533476 NUTM2BA6NNL0 878 aaPredicted RBP22.8■■□□□ 1.24
UBXN1-215ENST00000533476 NUTM2EB1AL46 878 aaPredicted RBP22.8■■□□□ 1.24
UBXN1-215ENST00000533476 JAK2O60674 1132 aa22.8■■□□□ 1.24
UBXN1-215ENST00000533476 ZAP70P43403 619 aa22.8■■□□□ 1.24
UBXN1-215ENST00000533476 NUTM2AQ8IVF1 878 aaPredicted RBP22.8■■□□□ 1.24
UBXN1-215ENST00000533476 CTNNA3Q9UI47 895 aa22.8■■□□□ 1.24
UBXN1-215ENST00000533476 UBN2Q6ZU65 1347 aa22.8■■□□□ 1.24
UBXN1-215ENST00000533476 NWD2Q9ULI1 1742 aa22.8■■□□□ 1.24
UBXN1-215ENST00000533476 FERMT3Q86UX7 667 aa22.8■■□□□ 1.24
UBXN1-215ENST00000533476 FAM184AQ8NB25 1140 aa22.8■■□□□ 1.24
UBXN1-215ENST00000533476 SMARCC2Q8TAQ2 1214 aa22.8■■□□□ 1.24
UBXN1-215ENST00000533476 APPBP2Q92624 585 aa22.8■■□□□ 1.24
UBXN1-215ENST00000533476 AK7Q96M32 723 aa22.8■■□□□ 1.24
UBXN1-215ENST00000533476 LRRC2Q9BYS8 371 aa22.8■■□□□ 1.24
UBXN1-215ENST00000533476 CNNM1Q9NRU3 951 aa22.8■■□□□ 1.24
UBXN1-215ENST00000533476 KAT6BQ8WYB5 2073 aa22.79■■□□□ 1.24
UBXN1-215ENST00000533476 AKAP11Q9UKA4 1901 aa22.79■■□□□ 1.24
UBXN1-215ENST00000533476 SCRN1Q12765 414 aa22.79■■□□□ 1.24
UBXN1-215ENST00000533476 TBC1D2BQ9UPU7 963 aa22.79■■□□□ 1.24
UBXN1-215ENST00000533476 ARAP2Q8WZ64 1704 aa22.79■■□□□ 1.24
UBXN1-215ENST00000533476 SLIT2O94813 1529 aa22.79■■□□□ 1.24
UBXN1-215ENST00000533476 WASHC4Q2M389 1173 aa22.78■■□□□ 1.24
UBXN1-215ENST00000533476 RNF214Q8ND24 703 aa22.78■■□□□ 1.24
UBXN1-215ENST00000533476 A0A0G2JLW4 131 aa22.78■■□□□ 1.24
UBXN1-215ENST00000533476 FOXP2O15409 715 aa22.78■■□□□ 1.24
UBXN1-215ENST00000533476 EIF5P55010 431 aaKnown RBP22.78■■□□□ 1.24
UBXN1-215ENST00000533476 TTC6Q86TZ1 520 aa22.78■■□□□ 1.24
UBXN1-215ENST00000533476 FBXL16Q8N461 479 aa22.78■■□□□ 1.24
UBXN1-215ENST00000533476 MCAMP43121 646 aa22.77■■□□□ 1.24
UBXN1-215ENST00000533476 DDB1Q16531 1140 aa22.77■■□□□ 1.24
UBXN1-215ENST00000533476 SCAND2PQ9GZW5 306 aaPredicted RBP22.77■■□□□ 1.24
UBXN1-215ENST00000533476 ATRNO75882 1429 aa22.77■■□□□ 1.24
UBXN1-215ENST00000533476 PDE8BO95263 885 aa22.76■■□□□ 1.23
UBXN1-215ENST00000533476 NAP1L5Q96NT1 182 aaPredicted RBP22.76■■□□□ 1.23
UBXN1-215ENST00000533476 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.76■■□□□ 1.23
UBXN1-215ENST00000533476 CCDC87Q9NVE4 849 aa22.76■■□□□ 1.23
UBXN1-215ENST00000533476 APOBRQ0VD83 1088 aa22.76■■□□□ 1.23
UBXN1-215ENST00000533476 TTLL5Q6EMB2 1281 aa22.76■■□□□ 1.23
UBXN1-215ENST00000533476 INTS5Q6P9B9 1019 aaKnown RBP22.76■■□□□ 1.23
UBXN1-215ENST00000533476 PI16Q6UXB8 463 aa22.76■■□□□ 1.23
UBXN1-215ENST00000533476 NSUN7Q8NE18 718 aaKnown RBP22.76■■□□□ 1.23
UBXN1-215ENST00000533476 HMGN5P82970 282 aaKnown RBP22.75■■□□□ 1.23
UBXN1-215ENST00000533476 RESTQ13127 1097 aa22.75■■□□□ 1.23
UBXN1-215ENST00000533476 IMMTQ16891 758 aaKnown RBP22.75■■□□□ 1.23
UBXN1-215ENST00000533476 UVSSAQ2YD98 709 aa22.75■■□□□ 1.23
UBXN1-215ENST00000533476 ZSCAN25Q6NSZ9 544 aa22.75■■□□□ 1.23
UBXN1-215ENST00000533476 TTF1Q15361 905 aaPredicted RBP22.74■■□□□ 1.23
UBXN1-215ENST00000533476 FAM173BQ6P4H8 233 aa22.74■■□□□ 1.23
UBXN1-215ENST00000533476 CHMP4CQ96CF2 233 aa22.74■■□□□ 1.23
UBXN1-215ENST00000533476 ZNF274Q96GC6 653 aaPredicted RBP22.74■■□□□ 1.23
UBXN1-215ENST00000533476 MROH5Q6ZUA9 1318 aa22.74■■□□□ 1.23
UBXN1-215ENST00000533476 PUS7LQ9H0K6 701 aaKnown RBP22.74■■□□□ 1.23
UBXN1-215ENST00000533476 ZSCAN16Q9H4T2 348 aaPredicted RBP22.74■■□□□ 1.23
UBXN1-215ENST00000533476 DDX60Q8IY21 1712 aaKnown RBP22.73■■□□□ 1.23
UBXN1-215ENST00000533476 H3BQV1 296 aa22.73■■□□□ 1.23
UBXN1-215ENST00000533476 ADAMTS2O95450 1211 aa22.73■■□□□ 1.23
UBXN1-215ENST00000533476 MSNP26038 577 aaKnown RBP22.73■■□□□ 1.23
UBXN1-215ENST00000533476 ARID4AP29374 1257 aaPredicted RBP22.73■■□□□ 1.23
UBXN1-215ENST00000533476 TPRNQ4KMQ1 711 aa22.73■■□□□ 1.23
UBXN1-215ENST00000533476 IFFO2Q5TF58 517 aa22.73■■□□□ 1.23
UBXN1-215ENST00000533476 NAA16Q6N069 864 aaPredicted RBP22.73■■□□□ 1.23
UBXN1-215ENST00000533476 DDX11Q96FC9 970 aa22.73■■□□□ 1.23
UBXN1-215ENST00000533476 FUCA2Q9BTY2 467 aa22.73■■□□□ 1.23
UBXN1-215ENST00000533476 NOL7Q9UMY1 257 aaKnown RBP22.73■■□□□ 1.23
UBXN1-215ENST00000533476 KIF3AQ9Y496 699 aa22.73■■□□□ 1.23
UBXN1-215ENST00000533476 GPAA1O43292 621 aa22.72■■□□□ 1.23
UBXN1-215ENST00000533476 CTDNEP1O95476 244 aa22.72■■□□□ 1.23
UBXN1-215ENST00000533476 ADD2P35612 726 aa22.72■■□□□ 1.23
UBXN1-215ENST00000533476 CRKLP46109 303 aaKnown RBP22.72■■□□□ 1.23
UBXN1-215ENST00000533476 EVCP57679 992 aa22.72■■□□□ 1.23
UBXN1-215ENST00000533476 PUM3Q15397 648 aaKnown RBP22.72■■□□□ 1.23
UBXN1-215ENST00000533476 SPATA32Q96LK8 384 aa22.72■■□□□ 1.23
UBXN1-215ENST00000533476 LAMB2P55268 1798 aa22.72■■□□□ 1.23
UBXN1-215ENST00000533476 SALL1Q9NSC2 1324 aa22.72■■□□□ 1.23
UBXN1-215ENST00000533476 PTPDC1A2A3K4 754 aa22.72■■□□□ 1.23
UBXN1-215ENST00000533476 FGAP02671 866 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms