RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 GNAI3P08754 354 aa12.34□□□□□ -0.43
NUP98-220ENST00000533346 UBTFL1P0CB47 393 aaPredicted RBP12.34□□□□□ -0.43
NUP98-220ENST00000533346 IL1R1P14778 569 aa12.34□□□□□ -0.43
NUP98-220ENST00000533346 DOK7Q18PE1 504 aa12.34□□□□□ -0.43
NUP98-220ENST00000533346 STRIP1Q5VSL9 837 aa12.34□□□□□ -0.43
NUP98-220ENST00000533346 TXNRD3Q86VQ6 643 aa12.34□□□□□ -0.43
NUP98-220ENST00000533346 ZNF594Q96JF6 807 aaPredicted RBP12.34□□□□□ -0.43
NUP98-220ENST00000533346 GPR101Q96P66 508 aaPredicted RBP12.34□□□□□ -0.43
NUP98-220ENST00000533346 KCNQ5Q9NR82 932 aa12.34□□□□□ -0.43
NUP98-220ENST00000533346 CNOT7Q9UIV1 285 aaKnown RBP12.34□□□□□ -0.43
NUP98-220ENST00000533346 CHMP3Q9Y3E7 222 aa12.34□□□□□ -0.43
NUP98-220ENST00000533346 MYO3BQ8WXR4 1341 aa12.34□□□□□ -0.43
NUP98-220ENST00000533346 USP17L3A6NCW0 530 aa12.33□□□□□ -0.44
NUP98-220ENST00000533346 USP17L4A6NCW7 530 aa12.33□□□□□ -0.44
NUP98-220ENST00000533346 ZNF280AP59817 542 aaPredicted RBP12.33□□□□□ -0.44
NUP98-220ENST00000533346 FKBP1AP62942 108 aaKnown RBP12.33□□□□□ -0.44
NUP98-220ENST00000533346 PTPN12Q05209 780 aaKnown RBP12.33□□□□□ -0.44
NUP98-220ENST00000533346 TAF7LQ5H9L4 462 aa12.33□□□□□ -0.44
NUP98-220ENST00000533346 RSBN1LQ6PCB5 846 aaPredicted RBP12.33□□□□□ -0.44
NUP98-220ENST00000533346 USP17L1Q7RTZ2 530 aa12.33□□□□□ -0.44
NUP98-220ENST00000533346 VGLL2Q8N8G2 317 aa12.33□□□□□ -0.44
NUP98-220ENST00000533346 CD209Q9NNX6 404 aa12.33□□□□□ -0.44
NUP98-220ENST00000533346 CNNM1Q9NRU3 951 aa12.33□□□□□ -0.44
NUP98-220ENST00000533346 POLR2AP24928 1970 aaKnown RBP12.32□□□□□ -0.44
NUP98-220ENST00000533346 G3V3G9 751 aa12.32□□□□□ -0.44
NUP98-220ENST00000533346 H7C1D1 291 aa12.32□□□□□ -0.44
NUP98-220ENST00000533346 TAF5LO75529 589 aa12.32□□□□□ -0.44
NUP98-220ENST00000533346 CIAO1O76071 339 aa12.32□□□□□ -0.44
NUP98-220ENST00000533346 PDE8BO95263 885 aa12.32□□□□□ -0.44
NUP98-220ENST00000533346 DACT2Q5SW24 774 aa12.32□□□□□ -0.44
NUP98-220ENST00000533346 DCAF8Q5TAQ9 597 aa12.32□□□□□ -0.44
NUP98-220ENST00000533346 TNS4Q8IZW8 715 aa12.32□□□□□ -0.44
NUP98-220ENST00000533346 CNTROBQ8N137 903 aa12.32□□□□□ -0.44
NUP98-220ENST00000533346 MEIS3Q99687 375 aa12.32□□□□□ -0.44
NUP98-220ENST00000533346 PUS3Q9BZE2 481 aaKnown RBP12.32□□□□□ -0.44
NUP98-220ENST00000533346 COPRSQ9NQ92 184 aa12.32□□□□□ -0.44
NUP98-220ENST00000533346 EYA2O00167 538 aa12.31□□□□□ -0.44
NUP98-220ENST00000533346 HIRAP54198 1017 aaPredicted RBP12.31□□□□□ -0.44
NUP98-220ENST00000533346 MICALL2Q8IY33 904 aa12.31□□□□□ -0.44
NUP98-220ENST00000533346 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
NUP98-220ENST00000533346 SASH1O94885 1247 aa12.3□□□□□ -0.44
NUP98-220ENST00000533346 FGFR2P21802 821 aa12.3□□□□□ -0.44
NUP98-220ENST00000533346 KLRK1P26718 216 aa12.3□□□□□ -0.44
NUP98-220ENST00000533346 KCNJ4P48050 445 aa12.3□□□□□ -0.44
NUP98-220ENST00000533346 LRRC24Q50LG9 513 aa12.3□□□□□ -0.44
NUP98-220ENST00000533346 EAPPQ56P03 285 aaPredicted RBP12.3□□□□□ -0.44
NUP98-220ENST00000533346 ATG9AQ7Z3C6 839 aa12.3□□□□□ -0.44
NUP98-220ENST00000533346 ZNF804AQ7Z570 1209 aa12.3□□□□□ -0.44
NUP98-220ENST00000533346 HELBQ8NG08 1087 aaPredicted RBP12.3□□□□□ -0.44
NUP98-220ENST00000533346 TDRD7Q8NHU6 1098 aaKnown RBP12.3□□□□□ -0.44
NUP98-220ENST00000533346 FRAT1Q92837 279 aaPredicted RBP12.3□□□□□ -0.44
NUP98-220ENST00000533346 CREBZFQ9NS37 354 aa12.3□□□□□ -0.44
NUP98-220ENST00000533346 LRRFIP2Q9Y608 721 aaKnown RBP12.3□□□□□ -0.44
NUP98-220ENST00000533346 FAM205AQ6ZU69 1335 aa12.3□□□□□ -0.44
NUP98-220ENST00000533346 ARAP2Q8WZ64 1704 aa12.29□□□□□ -0.44
NUP98-220ENST00000533346 ZBTB7BO15156 539 aaPredicted RBP12.29□□□□□ -0.44
NUP98-220ENST00000533346 USP17L8P0C7I0 530 aa12.29□□□□□ -0.44
NUP98-220ENST00000533346 MS4A1P11836 297 aa12.29□□□□□ -0.44
NUP98-220ENST00000533346 TTLL5Q6EMB2 1281 aa12.29□□□□□ -0.44
NUP98-220ENST00000533346 FBXO33Q7Z6M2 555 aa12.29□□□□□ -0.44
NUP98-220ENST00000533346 DZIP1LQ8IYY4 767 aaKnown RBP12.29□□□□□ -0.44
NUP98-220ENST00000533346 TMEM57Q8N5G2 664 aa12.29□□□□□ -0.44
NUP98-220ENST00000533346 FAM84BQ96KN1 310 aaPredicted RBP12.29□□□□□ -0.44
NUP98-220ENST00000533346 TNNQ9UQP3 1299 aa12.29□□□□□ -0.44
NUP98-220ENST00000533346 CLEC11AQ9Y240 323 aa12.29□□□□□ -0.44
NUP98-220ENST00000533346 ECM29Q5VYK3 1845 aa12.29□□□□□ -0.44
NUP98-220ENST00000533346 SNAP23O00161 211 aa12.28□□□□□ -0.44
NUP98-220ENST00000533346 GNAI2P04899 355 aa12.28□□□□□ -0.44
NUP98-220ENST00000533346 IL15P40933 162 aaPredicted RBP12.28□□□□□ -0.44
NUP98-220ENST00000533346 MAP1SQ66K74 1059 aaPredicted RBP12.28□□□□□ -0.44
NUP98-220ENST00000533346 CDC37L1Q7L3B6 337 aa12.28□□□□□ -0.44
NUP98-220ENST00000533346 TRPM4Q8TD43 1214 aa12.28□□□□□ -0.44
NUP98-220ENST00000533346 PITPNM2Q9BZ72 1349 aa12.28□□□□□ -0.44
NUP98-220ENST00000533346 SHTN1A0MZ66 631 aa12.27□□□□□ -0.45
NUP98-220ENST00000533346 TMEM88BA6NKF7 163 aa12.27□□□□□ -0.45
NUP98-220ENST00000533346 HIBADHP31937 336 aaKnown RBP12.27□□□□□ -0.45
NUP98-220ENST00000533346 METTL24Q5JXM2 366 aa12.27□□□□□ -0.45
NUP98-220ENST00000533346 SAMD7Q7Z3H4 446 aa12.27□□□□□ -0.45
NUP98-220ENST00000533346 MTMR14Q8NCE2 650 aa12.27□□□□□ -0.45
NUP98-220ENST00000533346 KLHDC4Q8TBB5 520 aa12.27□□□□□ -0.45
NUP98-220ENST00000533346 CLUAP1Q96AJ1 413 aa12.27□□□□□ -0.45
NUP98-220ENST00000533346 ZBED3Q96IU2 234 aaPredicted RBP12.27□□□□□ -0.45
NUP98-220ENST00000533346 HSPA1AP0DMV8 641 aaKnown RBP12.26□□□□□ -0.45
NUP98-220ENST00000533346 HSPA1BP0DMV9 641 aaKnown RBP12.26□□□□□ -0.45
NUP98-220ENST00000533346 GTF2IP78347 998 aa12.26□□□□□ -0.45
NUP98-220ENST00000533346 PUM3Q15397 648 aaKnown RBP12.26□□□□□ -0.45
NUP98-220ENST00000533346 KIF4BQ2VIQ3 1234 aa12.26□□□□□ -0.45
NUP98-220ENST00000533346 LPIN2Q92539 896 aa12.26□□□□□ -0.45
NUP98-220ENST00000533346 MYOZ2Q9NPC6 264 aa12.26□□□□□ -0.45
NUP98-220ENST00000533346 MYH13Q9UKX3 1938 aa12.26□□□□□ -0.45
NUP98-220ENST00000533346 SRGAP3O43295 1099 aa12.25□□□□□ -0.45
NUP98-220ENST00000533346 PLIN1O60240 522 aa12.25□□□□□ -0.45
NUP98-220ENST00000533346 EGFRP00533 1210 aa12.25□□□□□ -0.45
NUP98-220ENST00000533346 IFIT1P09914 478 aaKnown RBP12.25□□□□□ -0.45
NUP98-220ENST00000533346 RLBP1P12271 317 aa12.25□□□□□ -0.45
NUP98-220ENST00000533346 ATP8B2P98198 1209 aa12.25□□□□□ -0.45
NUP98-220ENST00000533346 POLA2Q14181 598 aa12.25□□□□□ -0.45
NUP98-220ENST00000533346 CAVIN4Q5BKX8 364 aa12.25□□□□□ -0.45
NUP98-220ENST00000533346 FTSJ3Q8IY81 847 aaKnown RBP12.25□□□□□ -0.45
NUP98-220ENST00000533346 OGFOD1Q8N543 542 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms