RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	DTX1	Q86Y01	620 aa		5.88	□□□□□ -1.47
LMO7-223	ENST00000533299	POLI	Q9UNA4	740 aa		5.88	□□□□□ -1.47
LMO7-223	ENST00000533299	XYLB	O75191	536 aa		5.87	□□□□□ -1.47
LMO7-223	ENST00000533299	IGLV1-40	P01703	118 aa		5.87	□□□□□ -1.47
LMO7-223	ENST00000533299	SFSWAP	Q12872	951 aa	Known RBP	5.87	□□□□□ -1.47
LMO7-223	ENST00000533299	ECM1	Q16610	540 aa		5.87	□□□□□ -1.47
LMO7-223	ENST00000533299	FAM26D	Q5JW98	314 aa		5.87	□□□□□ -1.47
LMO7-223	ENST00000533299	DZIP1L	Q8IYY4	767 aa	Known RBP	5.87	□□□□□ -1.47
LMO7-223	ENST00000533299	DMRTB1	Q96MA1	342 aa		5.87	□□□□□ -1.47
LMO7-223	ENST00000533299	RBCK1	Q9BYM8	510 aa		5.87	□□□□□ -1.47
LMO7-223	ENST00000533299	EGFR	P00533	1210 aa		5.86	□□□□□ -1.47
LMO7-223	ENST00000533299	PDE12	Q6L8Q7	609 aa	Known RBP	5.86	□□□□□ -1.47
LMO7-223	ENST00000533299	CCDC87	Q9NVE4	849 aa		5.86	□□□□□ -1.47
LMO7-223	ENST00000533299	PODXL2	Q9NZ53	605 aa		5.86	□□□□□ -1.47
LMO7-223	ENST00000533299	DBX1	A6NMT0	343 aa		5.85	□□□□□ -1.47
LMO7-223	ENST00000533299	TGFB1	P01137	390 aa		5.85	□□□□□ -1.47
LMO7-223	ENST00000533299	SPEM2	Q0P670	501 aa		5.85	□□□□□ -1.47
LMO7-223	ENST00000533299	FBXO11	Q86XK2	927 aa		5.85	□□□□□ -1.47
LMO7-223	ENST00000533299	MFAP1	P55081	439 aa	Known RBP	5.85	□□□□□ -1.47
LMO7-223	ENST00000533299	XKR5	Q6UX68	686 aa		5.85	□□□□□ -1.47
LMO7-223	ENST00000533299	ZNF438	Q7Z4V0	828 aa		5.85	□□□□□ -1.47
LMO7-223	ENST00000533299	NLRP13	Q86W25	1043 aa		5.85	□□□□□ -1.47
LMO7-223	ENST00000533299	ASB16	Q96NS5	453 aa		5.85	□□□□□ -1.47
LMO7-223	ENST00000533299	GSX2	Q9BZM3	304 aa		5.85	□□□□□ -1.47
LMO7-223	ENST00000533299	USP20	Q9Y2K6	914 aa		5.85	□□□□□ -1.47
LMO7-223	ENST00000533299	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	5.85	□□□□□ -1.47
LMO7-223	ENST00000533299	PCSK7	Q16549	785 aa		5.84	□□□□□ -1.47
LMO7-223	ENST00000533299	TTC39B	Q5VTQ0	682 aa	Predicted RBP	5.84	□□□□□ -1.47
LMO7-223	ENST00000533299	IGF2-AS	Q6U949	168 aa		5.84	□□□□□ -1.47
LMO7-223	ENST00000533299	GJD3	Q8N144	294 aa		5.84	□□□□□ -1.47
LMO7-223	ENST00000533299	PMEPA1	Q969W9	287 aa		5.84	□□□□□ -1.47
LMO7-223	ENST00000533299	KCNMB2	Q9Y691	235 aa		5.84	□□□□□ -1.47
LMO7-223	ENST00000533299	RARA	P10276	462 aa		5.83	□□□□□ -1.48
LMO7-223	ENST00000533299	BHMT	Q93088	406 aa		5.83	□□□□□ -1.48
LMO7-223	ENST00000533299	SASH3	O75995	380 aa		5.83	□□□□□ -1.48
LMO7-223	ENST00000533299	FGD1	P98174	961 aa		5.83	□□□□□ -1.48
LMO7-223	ENST00000533299	PLCB3	Q01970	1234 aa		5.83	□□□□□ -1.48
LMO7-223	ENST00000533299	FAM129B	Q96TA1	746 aa		5.83	□□□□□ -1.48
LMO7-223	ENST00000533299	ELP3	Q9H9T3	547 aa		5.83	□□□□□ -1.48
LMO7-223	ENST00000533299	ABI2	Q9NYB9	513 aa	Predicted RBP	5.83	□□□□□ -1.48
LMO7-223	ENST00000533299	PSAP	P07602	524 aa		5.82	□□□□□ -1.48
LMO7-223	ENST00000533299	KRTAP19-4	Q3LI73	84 aa		5.82	□□□□□ -1.48
LMO7-223	ENST00000533299	KRT25	Q7Z3Z0	450 aa		5.82	□□□□□ -1.48
LMO7-223	ENST00000533299	SNX29	Q8TEQ0	813 aa		5.82	□□□□□ -1.48
LMO7-223	ENST00000533299	ALKBH8	Q96BT7	664 aa	Known RBP	5.82	□□□□□ -1.48
LMO7-223	ENST00000533299	GGNBP2	Q9H3C7	697 aa		5.82	□□□□□ -1.48
LMO7-223	ENST00000533299	RAX	Q9Y2V3	346 aa		5.82	□□□□□ -1.48
LMO7-223	ENST00000533299	MAP3K6	O95382	1288 aa		5.81	□□□□□ -1.48
LMO7-223	ENST00000533299	NFKB1	P19838	968 aa		5.81	□□□□□ -1.48
LMO7-223	ENST00000533299	TRIP4	Q15650	581 aa	Predicted RBP	5.81	□□□□□ -1.48
LMO7-223	ENST00000533299	TMC7	Q7Z402	723 aa		5.81	□□□□□ -1.48
LMO7-223	ENST00000533299	DMRTC2	Q8IXT2	367 aa	Predicted RBP	5.81	□□□□□ -1.48
LMO7-223	ENST00000533299	SLC30A3	Q99726	388 aa		5.81	□□□□□ -1.48
LMO7-223	ENST00000533299	KRTAP9-3	Q9BYQ3	159 aa		5.81	□□□□□ -1.48
LMO7-223	ENST00000533299	BCL11A	Q9H165	835 aa		5.81	□□□□□ -1.48
LMO7-223	ENST00000533299	JPH1	Q9HDC5	661 aa	Predicted RBP	5.81	□□□□□ -1.48
LMO7-223	ENST00000533299	JUNB	P17275	347 aa	Predicted RBP	5.81	□□□□□ -1.48
LMO7-223	ENST00000533299	TARS	P26639	723 aa	Known RBP	5.81	□□□□□ -1.48
LMO7-223	ENST00000533299	GRN	P28799	593 aa	Known RBP	5.81	□□□□□ -1.48
LMO7-223	ENST00000533299	PLAUR	Q03405	335 aa		5.81	□□□□□ -1.48
LMO7-223	ENST00000533299	COL19A1	Q14993	1142 aa		5.81	□□□□□ -1.48
LMO7-223	ENST00000533299	ZDHHC13	Q8IUH4	622 aa		5.81	□□□□□ -1.48
LMO7-223	ENST00000533299	NCAN	O14594	1321 aa		5.8	□□□□□ -1.48
LMO7-223	ENST00000533299	ANKRD33B	A6NCL7	494 aa		5.8	□□□□□ -1.48
LMO7-223	ENST00000533299	PHACTR2	O75167	634 aa		5.8	□□□□□ -1.48
LMO7-223	ENST00000533299	SOX18	P35713	384 aa		5.8	□□□□□ -1.48
LMO7-223	ENST00000533299	AFF1	P51825	1210 aa	Known RBP	5.8	□□□□□ -1.48
LMO7-223	ENST00000533299	NIF3L1	Q9GZT8	377 aa		5.8	□□□□□ -1.48
LMO7-223	ENST00000533299	DNAJC25	Q9H1X3	360 aa		5.8	□□□□□ -1.48
LMO7-223	ENST00000533299	PRRG2	O14669	202 aa		5.79	□□□□□ -1.48
LMO7-223	ENST00000533299	TREH	O43280	583 aa		5.79	□□□□□ -1.48
LMO7-223	ENST00000533299	TNFRSF21	O75509	655 aa		5.79	□□□□□ -1.48
LMO7-223	ENST00000533299	ATP2B2	Q01814	1243 aa		5.79	□□□□□ -1.48
LMO7-223	ENST00000533299	RAB44	Q7Z6P3	723 aa	Predicted RBP	5.79	□□□□□ -1.48
LMO7-223	ENST00000533299	UBE2O	Q9C0C9	1292 aa	Known RBP	5.79	□□□□□ -1.48
LMO7-223	ENST00000533299	RBSN	Q9H1K0	784 aa		5.79	□□□□□ -1.48
LMO7-223	ENST00000533299	IGFLR1	Q9H665	355 aa		5.79	□□□□□ -1.48
LMO7-223	ENST00000533299	TLR7	Q9NYK1	1049 aa	Known RBP	5.79	□□□□□ -1.48
LMO7-223	ENST00000533299		A6NHS1	94 aa		5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	MMP20	O60882	483 aa		5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	CPNE3	O75131	537 aa	Known RBP	5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	CES1	P23141	567 aa		5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	DHX32	Q7L7V1	743 aa	Known RBP	5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	OR13H1	Q8NG92	308 aa		5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	SPACA7	Q96KW9	195 aa		5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	AKTIP	Q9H8T0	292 aa		5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	TMEM63C	Q9P1W3	806 aa		5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	GPR182	O15218	404 aa		5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	ITGB5	P18084	799 aa		5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	ITGAE	P38570	1179 aa		5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	NRL	P54845	237 aa		5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	HYAL2	Q12891	473 aa		5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	ZFAT	Q9P243	1243 aa		5.78	□□□□□ -1.48
LMO7-223	ENST00000533299	MAPK8	P45983	427 aa		5.77	□□□□□ -1.49
LMO7-223	ENST00000533299	TBC1D8B	Q0IIM8	1120 aa		5.77	□□□□□ -1.49
LMO7-223	ENST00000533299	DSC3	Q14574	896 aa		5.77	□□□□□ -1.49
LMO7-223	ENST00000533299	EAPP	Q56P03	285 aa	Predicted RBP	5.77	□□□□□ -1.49
LMO7-223	ENST00000533299	CBLL1	Q75N03	491 aa		5.77	□□□□□ -1.49
LMO7-223	ENST00000533299	TMEM130	Q8N3G9	435 aa		5.77	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms