RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, human

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GMDS-210	ENST00000533279	TAOK3	Q9H2K8	898 aa		13.91	□□□□□ -0.18
GMDS-210	ENST00000533279	KIAA1551	Q9HCM1	1747 aa		13.9	□□□□□ -0.18
GMDS-210	ENST00000533279	SMARCA5	O60264	1052 aa	Predicted RBP	13.9	□□□□□ -0.18
GMDS-210	ENST00000533279	UQCRFS1P1	P0C7P4	283 aa		13.9	□□□□□ -0.18
GMDS-210	ENST00000533279	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
GMDS-210	ENST00000533279	WASHC4	Q2M389	1173 aa		13.9	□□□□□ -0.18
GMDS-210	ENST00000533279	VGLL2	Q8N8G2	317 aa		13.9	□□□□□ -0.18
GMDS-210	ENST00000533279	TBC1D16	Q8TBP0	767 aa		13.9	□□□□□ -0.18
GMDS-210	ENST00000533279	PSMD1	Q99460	953 aa		13.9	□□□□□ -0.18
GMDS-210	ENST00000533279	MED23	Q9ULK4	1368 aa		13.9	□□□□□ -0.18
GMDS-210	ENST00000533279	TAF1	P21675	1872 aa		13.9	□□□□□ -0.18
GMDS-210	ENST00000533279	SLX4	Q8IY92	1834 aa		13.9	□□□□□ -0.18
GMDS-210	ENST00000533279	GRIN3B	O60391	1043 aa		13.89	□□□□□ -0.19
GMDS-210	ENST00000533279	MX1	P20591	662 aa		13.89	□□□□□ -0.19
GMDS-210	ENST00000533279	XAGE2	Q96GT9	111 aa		13.89	□□□□□ -0.19
GMDS-210	ENST00000533279	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.89	□□□□□ -0.19
GMDS-210	ENST00000533279	TTC41P	Q6P2S7	1318 aa		13.89	□□□□□ -0.19
GMDS-210	ENST00000533279	PPIP5K2	O43314	1243 aa		13.88	□□□□□ -0.19
GMDS-210	ENST00000533279	HIBADH	P31937	336 aa	Known RBP	13.88	□□□□□ -0.19
GMDS-210	ENST00000533279	ARHGAP27	Q6ZUM4	889 aa		13.88	□□□□□ -0.19
GMDS-210	ENST00000533279	C7orf43	Q8WVR3	580 aa		13.88	□□□□□ -0.19
GMDS-210	ENST00000533279	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.88	□□□□□ -0.19
GMDS-210	ENST00000533279	BRCA1	P38398	1863 aa	Known RBP	13.88	□□□□□ -0.19
GMDS-210	ENST00000533279	AOX1	Q06278	1338 aa		13.88	□□□□□ -0.19
GMDS-210	ENST00000533279	FGFR2	P21802	821 aa		13.87	□□□□□ -0.19
GMDS-210	ENST00000533279	TIMM10	P62072	90 aa		13.87	□□□□□ -0.19
GMDS-210	ENST00000533279	C15orf52	Q6ZUT6	534 aa	Known RBP	13.87	□□□□□ -0.19
GMDS-210	ENST00000533279	NIM1K	Q8IY84	436 aa		13.87	□□□□□ -0.19
GMDS-210	ENST00000533279	LARGE2	Q8N3Y3	721 aa		13.87	□□□□□ -0.19
GMDS-210	ENST00000533279	JDP2	Q8WYK2	163 aa		13.87	□□□□□ -0.19
GMDS-210	ENST00000533279	EAF2	Q96CJ1	260 aa	Predicted RBP	13.87	□□□□□ -0.19
GMDS-210	ENST00000533279	DBNDD2	Q9BQY9	259 aa		13.87	□□□□□ -0.19
GMDS-210	ENST00000533279	ECHDC1	Q9NTX5	307 aa		13.87	□□□□□ -0.19
GMDS-210	ENST00000533279	ARFGEF1	Q9Y6D6	1849 aa		13.87	□□□□□ -0.19
GMDS-210	ENST00000533279	LTBP3	Q9NS15	1303 aa		13.87	□□□□□ -0.19
GMDS-210	ENST00000533279	RIMBP2	O15034	1052 aa		13.86	□□□□□ -0.19
GMDS-210	ENST00000533279	SEMA3E	O15041	775 aa		13.86	□□□□□ -0.19
GMDS-210	ENST00000533279	GLRX3	O76003	335 aa	Known RBP	13.86	□□□□□ -0.19
GMDS-210	ENST00000533279	COA1	Q9GZY4	146 aa		13.86	□□□□□ -0.19
GMDS-210	ENST00000533279	POLL	Q9UGP5	575 aa		13.86	□□□□□ -0.19
GMDS-210	ENST00000533279	DBNL	Q9UJU6	430 aa	Known RBP	13.86	□□□□□ -0.19
GMDS-210	ENST00000533279	COL4A1	P02462	1669 aa		13.85	□□□□□ -0.19
GMDS-210	ENST00000533279	IARS	P41252	1262 aa	Known RBP	13.85	□□□□□ -0.19
GMDS-210	ENST00000533279	RGS3	P49796	1198 aa		13.85	□□□□□ -0.19
GMDS-210	ENST00000533279	KIAA2012	Q0VF49	1180 aa		13.85	□□□□□ -0.19
GMDS-210	ENST00000533279	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.85	□□□□□ -0.19
GMDS-210	ENST00000533279	OLFM4	Q6UX06	510 aa		13.85	□□□□□ -0.19
GMDS-210	ENST00000533279	DENND2A	Q9ULE3	1009 aa		13.85	□□□□□ -0.19
GMDS-210	ENST00000533279		A0A1B0GUL6	1792 aa		13.85	□□□□□ -0.19
GMDS-210	ENST00000533279	ARAP2	Q8WZ64	1704 aa		13.84	□□□□□ -0.19
GMDS-210	ENST00000533279	ADORA1	P30542	326 aa		13.84	□□□□□ -0.19
GMDS-210	ENST00000533279	GYG1	P46976	350 aa		13.84	□□□□□ -0.19
GMDS-210	ENST00000533279	AOC3	Q16853	763 aa		13.84	□□□□□ -0.19
GMDS-210	ENST00000533279	CCDC102B	Q68D86	513 aa		13.84	□□□□□ -0.19
GMDS-210	ENST00000533279	ZGPAT	Q8N5A5	531 aa	Known RBP	13.84	□□□□□ -0.19
GMDS-210	ENST00000533279	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
GMDS-210	ENST00000533279	FBXW7	Q969H0	707 aa		13.84	□□□□□ -0.19
GMDS-210	ENST00000533279	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.84	□□□□□ -0.19
GMDS-210	ENST00000533279	TLR7	Q9NYK1	1049 aa	Known RBP	13.84	□□□□□ -0.19
GMDS-210	ENST00000533279	LMNB1	P20700	586 aa		13.83	□□□□□ -0.2
GMDS-210	ENST00000533279	BCAM	P50895	628 aa		13.83	□□□□□ -0.2
GMDS-210	ENST00000533279	PDE1A	P54750	535 aa		13.83	□□□□□ -0.2
GMDS-210	ENST00000533279	TTF1	Q15361	905 aa	Predicted RBP	13.83	□□□□□ -0.2
GMDS-210	ENST00000533279	PODN	Q7Z5L7	613 aa		13.83	□□□□□ -0.2
GMDS-210	ENST00000533279	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.83	□□□□□ -0.2
GMDS-210	ENST00000533279	TRIM6-TRIM34	B2RNG4	842 aa		13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	SNAP23	O00161	211 aa		13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	ECE2	O60344	883 aa		13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	ATP5J	P18859	108 aa		13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	ARID4A	P29374	1257 aa	Predicted RBP	13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	PHKA1	P46020	1223 aa		13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	EIF6	P56537	245 aa	Known RBP	13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	FBXO33	Q7Z6M2	555 aa		13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	CNTROB	Q8N137	903 aa		13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	WDR66	Q8TBY9	1149 aa		13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	TBC1D22A	Q8WUA7	517 aa		13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	FAM84B	Q96KN1	310 aa	Predicted RBP	13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	GPR101	Q96P66	508 aa	Predicted RBP	13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	DNAJC2	Q99543	621 aa	Known RBP	13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	CD209	Q9NNX6	404 aa		13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	STAP2	Q9UGK3	403 aa		13.82	□□□□□ -0.2
GMDS-210	ENST00000533279	LTBP1	Q14766	1721 aa		13.81	□□□□□ -0.2
GMDS-210	ENST00000533279	DUOX1	Q9NRD9	1551 aa		13.81	□□□□□ -0.2
GMDS-210	ENST00000533279	NFKBIE	O00221	500 aa		13.81	□□□□□ -0.2
GMDS-210	ENST00000533279	RASSF7	Q02833	373 aa		13.81	□□□□□ -0.2
GMDS-210	ENST00000533279	CHAF1A	Q13111	956 aa	Predicted RBP	13.81	□□□□□ -0.2
GMDS-210	ENST00000533279	DOK7	Q18PE1	504 aa		13.81	□□□□□ -0.2
GMDS-210	ENST00000533279	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.81	□□□□□ -0.2
GMDS-210	ENST00000533279	CASC1	Q6TDU7	716 aa		13.81	□□□□□ -0.2
GMDS-210	ENST00000533279	PLEKHM2	Q8IWE5	1019 aa		13.81	□□□□□ -0.2
GMDS-210	ENST00000533279	SPATA5	Q8NB90	893 aa		13.81	□□□□□ -0.2
GMDS-210	ENST00000533279	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
GMDS-210	ENST00000533279	OSBPL3	Q9H4L5	887 aa		13.81	□□□□□ -0.2
GMDS-210	ENST00000533279	PDS5A	Q29RF7	1337 aa	Known RBP	13.81	□□□□□ -0.2
GMDS-210	ENST00000533279	IL1R1	P14778	569 aa		13.8	□□□□□ -0.2
GMDS-210	ENST00000533279	YBX3	P16989	372 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
GMDS-210	ENST00000533279	TNIP1	Q15025	636 aa		13.8	□□□□□ -0.2
GMDS-210	ENST00000533279	ZSCAN25	Q6NSZ9	544 aa		13.8	□□□□□ -0.2
GMDS-210	ENST00000533279	BOLA2	Q9H3K6	86 aa		13.8	□□□□□ -0.2

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