RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 MYO3BQ8WXR4 1341 aa29.65■■■□□ 2.34
SMPD1-209ENST00000533196 A0A1B0GUL6 1792 aa29.64■■■□□ 2.34
SMPD1-209ENST00000533196 EGFRP00533 1210 aa29.64■■■□□ 2.34
SMPD1-209ENST00000533196 USP17L8P0C7I0 530 aa29.64■■■□□ 2.34
SMPD1-209ENST00000533196 KCNJ4P48050 445 aa29.64■■■□□ 2.34
SMPD1-209ENST00000533196 MMP14P50281 582 aa29.64■■■□□ 2.34
SMPD1-209ENST00000533196 RBM26Q5T8P6 1007 aaKnown RBP29.64■■■□□ 2.34
SMPD1-209ENST00000533196 TRMT2AQ8IZ69 625 aaKnown RBP29.64■■■□□ 2.34
SMPD1-209ENST00000533196 UTYO14607 1347 aa29.64■■■□□ 2.34
SMPD1-209ENST00000533196 CT47B1P0C2W7 299 aaPredicted RBP29.63■■■□□ 2.33
SMPD1-209ENST00000533196 EPHA10Q5JZY3 1008 aa29.63■■■□□ 2.33
SMPD1-209ENST00000533196 STRIP1Q5VSL9 837 aa29.63■■■□□ 2.33
SMPD1-209ENST00000533196 USP48Q86UV5 1035 aa29.63■■■□□ 2.33
SMPD1-209ENST00000533196 SSH1Q8WYL5 1049 aa29.63■■■□□ 2.33
SMPD1-209ENST00000533196 ZNF646O15015 1829 aaPredicted RBP29.62■■■□□ 2.33
SMPD1-209ENST00000533196 C15orf52Q6ZUT6 534 aaKnown RBP29.62■■■□□ 2.33
SMPD1-209ENST00000533196 KRT26Q7Z3Y9 468 aa29.62■■■□□ 2.33
SMPD1-209ENST00000533196 SAPCD2Q86UD0 394 aa29.62■■■□□ 2.33
SMPD1-209ENST00000533196 TXNRD3Q86VQ6 643 aa29.62■■■□□ 2.33
SMPD1-209ENST00000533196 THSD7BQ9C0I4 1608 aa29.61■■■□□ 2.33
SMPD1-209ENST00000533196 DACT2Q5SW24 774 aa29.61■■■□□ 2.33
SMPD1-209ENST00000533196 AIDAQ96BJ3 306 aa29.61■■■□□ 2.33
SMPD1-209ENST00000533196 CAPNS2Q96L46 248 aa29.61■■■□□ 2.33
SMPD1-209ENST00000533196 MAP2K1Q02750 393 aaPredicted RBP29.6■■■□□ 2.33
SMPD1-209ENST00000533196 TAF7LQ5H9L4 462 aa29.6■■■□□ 2.33
SMPD1-209ENST00000533196 COL13A1Q5TAT6 717 aaPredicted RBP29.6■■■□□ 2.33
SMPD1-209ENST00000533196 CDCA7LQ96GN5 454 aa29.6■■■□□ 2.33
SMPD1-209ENST00000533196 WBP1LQ9NX94 342 aa29.6■■■□□ 2.33
SMPD1-209ENST00000533196 LDHAL6AQ6ZMR3 332 aa29.59■■■□□ 2.33
SMPD1-209ENST00000533196 PAXIP1Q6ZW49 1069 aaPredicted RBP29.59■■■□□ 2.33
SMPD1-209ENST00000533196 MYOZ2Q9NPC6 264 aa29.59■■■□□ 2.33
SMPD1-209ENST00000533196 NBPF7P0C2Y1 421 aaPredicted RBP29.58■■■□□ 2.33
SMPD1-209ENST00000533196 SULF1Q8IWU6 871 aa29.58■■■□□ 2.33
SMPD1-209ENST00000533196 SUCLG2Q96I99 432 aa29.58■■■□□ 2.33
SMPD1-209ENST00000533196 ZNF408Q9H9D4 720 aa29.58■■■□□ 2.33
SMPD1-209ENST00000533196 OGFOD1Q8N543 542 aa29.57■■■□□ 2.32
SMPD1-209ENST00000533196 GGA3Q9NZ52 723 aa29.57■■■□□ 2.32
SMPD1-209ENST00000533196 PITPNM2Q9BZ72 1349 aa29.56■■■□□ 2.32
SMPD1-209ENST00000533196 IRS2Q9Y4H2 1338 aa29.56■■■□□ 2.32
SMPD1-209ENST00000533196 KLRK1P26718 216 aa29.56■■■□□ 2.32
SMPD1-209ENST00000533196 SCARF1Q14162 830 aa29.56■■■□□ 2.32
SMPD1-209ENST00000533196 TTLL5Q6EMB2 1281 aa29.56■■■□□ 2.32
SMPD1-209ENST00000533196 CYP4F22Q6NT55 531 aa29.56■■■□□ 2.32
SMPD1-209ENST00000533196 KAZALD1Q96I82 304 aa29.56■■■□□ 2.32
SMPD1-209ENST00000533196 CD209Q9NNX6 404 aa29.56■■■□□ 2.32
SMPD1-209ENST00000533196 CNNM1Q9NRU3 951 aa29.56■■■□□ 2.32
SMPD1-209ENST00000533196 FOXN1O15353 648 aa29.55■■■□□ 2.32
SMPD1-209ENST00000533196 TAF5LO75529 589 aa29.55■■■□□ 2.32
SMPD1-209ENST00000533196 MAP2K2P36507 400 aa29.55■■■□□ 2.32
SMPD1-209ENST00000533196 CTCFP49711 727 aaPredicted RBP29.55■■■□□ 2.32
SMPD1-209ENST00000533196 RABL6Q3YEC7 729 aaPredicted RBP29.55■■■□□ 2.32
SMPD1-209ENST00000533196 ZNF594Q96JF6 807 aaPredicted RBP29.55■■■□□ 2.32
SMPD1-209ENST00000533196 HELBQ8NG08 1087 aaPredicted RBP29.54■■■□□ 2.32
SMPD1-209ENST00000533196 FBXW7Q969H0 707 aa29.54■■■□□ 2.32
SMPD1-209ENST00000533196 SMC4Q9NTJ3 1288 aa29.54■■■□□ 2.32
SMPD1-209ENST00000533196 ADM5C9JUS6 153 aa29.53■■■□□ 2.32
SMPD1-209ENST00000533196 ZNF804AQ7Z570 1209 aa29.53■■■□□ 2.32
SMPD1-209ENST00000533196 PRDM10Q9NQV6 1147 aa29.53■■■□□ 2.32
SMPD1-209ENST00000533196 BRPF1P55201 1214 aaPredicted RBP29.52■■■□□ 2.32
SMPD1-209ENST00000533196 ANGEL2Q5VTE6 544 aaKnown RBP29.52■■■□□ 2.32
SMPD1-209ENST00000533196 C2orf69Q8N8R5 385 aa29.52■■■□□ 2.32
SMPD1-209ENST00000533196 GBA2Q9HCG7 927 aaPredicted RBP29.52■■■□□ 2.32
SMPD1-209ENST00000533196 HDAC9Q9UKV0 1011 aa29.52■■■□□ 2.32
SMPD1-209ENST00000533196 GTF2IP78347 998 aa29.51■■■□□ 2.31
SMPD1-209ENST00000533196 BICC1Q9H694 974 aaKnown RBP29.51■■■□□ 2.31
SMPD1-209ENST00000533196 ASTN2O75129 1339 aaPredicted RBP29.5■■■□□ 2.31
SMPD1-209ENST00000533196 IL1R1P14778 569 aa29.5■■■□□ 2.31
SMPD1-209ENST00000533196 HUNKP57058 714 aa29.5■■■□□ 2.31
SMPD1-209ENST00000533196 UBE4AQ14139 1066 aa29.5■■■□□ 2.31
SMPD1-209ENST00000533196 TNS4Q8IZW8 715 aa29.5■■■□□ 2.31
SMPD1-209ENST00000533196 MXD3Q9BW11 206 aa29.5■■■□□ 2.31
SMPD1-209ENST00000533196 SNAP23O00161 211 aa29.49■■■□□ 2.31
SMPD1-209ENST00000533196 GRM1Q13255 1194 aa29.49■■■□□ 2.31
SMPD1-209ENST00000533196 BEGAINQ9BUH8 593 aa29.49■■■□□ 2.31
SMPD1-209ENST00000533196 USP44Q9H0E7 712 aa29.49■■■□□ 2.31
SMPD1-209ENST00000533196 MROH5Q6ZUA9 1318 aa29.48■■■□□ 2.31
SMPD1-209ENST00000533196 FKBP1AP62942 108 aaKnown RBP29.48■■■□□ 2.31
SMPD1-209ENST00000533196 DLK2Q6UY11 383 aa29.48■■■□□ 2.31
SMPD1-209ENST00000533196 CDCA5Q96FF9 252 aa29.48■■■□□ 2.31
SMPD1-209ENST00000533196 ANKRD44Q8N8A2 993 aa29.47■■■□□ 2.31
SMPD1-209ENST00000533196 RIPOR2Q9Y4F9 1068 aa29.47■■■□□ 2.31
SMPD1-209ENST00000533196 WNT10BO00744 389 aa29.46■■■□□ 2.31
SMPD1-209ENST00000533196 PLIN1O60240 522 aa29.46■■■□□ 2.31
SMPD1-209ENST00000533196 NBPF9Q3BBW0 867 aa29.46■■■□□ 2.31
SMPD1-209ENST00000533196 FKBP1BP68106 108 aa29.45■■■□□ 2.31
SMPD1-209ENST00000533196 NOGQ13253 232 aa29.45■■■□□ 2.31
SMPD1-209ENST00000533196 RGMBQ6NW40 437 aa29.45■■■□□ 2.31
SMPD1-209ENST00000533196 KIAA0825Q8IV33 1275 aa29.45■■■□□ 2.31
SMPD1-209ENST00000533196 PUS3Q9BZE2 481 aaKnown RBP29.45■■■□□ 2.31
SMPD1-209ENST00000533196 API5Q9BZZ5 524 aaKnown RBP29.45■■■□□ 2.31
SMPD1-209ENST00000533196 AOC2O75106 756 aa29.44■■■□□ 2.3
SMPD1-209ENST00000533196 HSPA8P11142 646 aaKnown RBP29.43■■■□□ 2.3
SMPD1-209ENST00000533196 CCDC102AQ96A19 550 aa29.43■■■□□ 2.3
SMPD1-209ENST00000533196 CA12O43570 354 aa29.42■■■□□ 2.3
SMPD1-209ENST00000533196 SASH1O94885 1247 aa29.42■■■□□ 2.3
SMPD1-209ENST00000533196 ZBED3Q96IU2 234 aaPredicted RBP29.42■■■□□ 2.3
SMPD1-209ENST00000533196 NOB1Q9ULX3 412 aaKnown RBP29.42■■■□□ 2.3
SMPD1-209ENST00000533196 PAPPA2Q9BXP8 1791 aa29.41■■■□□ 2.3
SMPD1-209ENST00000533196 LBX1P52954 281 aa29.41■■■□□ 2.3
SMPD1-209ENST00000533196 CERS5Q8N5B7 392 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms