RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 LAS1LQ9Y4W2 734 aaKnown RBP16.1■□□□□ 0.17
CAPN1-223ENST00000533079 RALBP1Q15311 655 aa16.09■□□□□ 0.17
CAPN1-223ENST00000533079 DACT2Q5SW24 774 aa16.09■□□□□ 0.17
CAPN1-223ENST00000533079 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
CAPN1-223ENST00000533079 CWC25Q9NXE8 425 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-223ENST00000533079 TRIM35Q9UPQ4 493 aa16.09■□□□□ 0.17
CAPN1-223ENST00000533079 BRCA2P51587 3418 aa16.09■□□□□ 0.17
CAPN1-223ENST00000533079 CENPFP49454 3210 aa16.08■□□□□ 0.17
CAPN1-223ENST00000533079 MANSC4A6NHS7 340 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-223ENST00000533079 ZBTB48P10074 688 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-223ENST00000533079 HABP4Q5JVS0 413 aaKnown RBP16.08■□□□□ 0.16
CAPN1-223ENST00000533079 SPRYD7Q5W111 196 aa16.08■□□□□ 0.16
CAPN1-223ENST00000533079 COA1Q9GZY4 146 aa16.08■□□□□ 0.16
CAPN1-223ENST00000533079 SPEF2Q9C093 1822 aa16.08■□□□□ 0.16
CAPN1-223ENST00000533079 MYH3P11055 1940 aa16.07■□□□□ 0.16
CAPN1-223ENST00000533079 UNCXA6NJT0 531 aa16.07■□□□□ 0.16
CAPN1-223ENST00000533079 CTSWP56202 376 aa16.07■□□□□ 0.16
CAPN1-223ENST00000533079 PTPN12Q05209 780 aaKnown RBP16.07■□□□□ 0.16
CAPN1-223ENST00000533079 MKRN3Q13064 507 aaKnown RBP16.07■□□□□ 0.16
CAPN1-223ENST00000533079 NEUROD2Q15784 382 aa16.07■□□□□ 0.16
CAPN1-223ENST00000533079 LDLRAD1Q5T700 205 aa16.07■□□□□ 0.16
CAPN1-223ENST00000533079 PRAMEF18Q5VWM3 479 aa16.07■□□□□ 0.16
CAPN1-223ENST00000533079 RUNDC1Q96C34 613 aa16.07■□□□□ 0.16
CAPN1-223ENST00000533079 MYD88Q99836 296 aa16.07■□□□□ 0.16
CAPN1-223ENST00000533079 CHMP4AQ9BY43 222 aa16.07■□□□□ 0.16
CAPN1-223ENST00000533079 BSDC1Q9NW68 430 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-223ENST00000533079 ECM29Q5VYK3 1845 aa16.07■□□□□ 0.16
CAPN1-223ENST00000533079 DDX58O95786 925 aaKnown RBP16.06■□□□□ 0.16
CAPN1-223ENST00000533079 MAP3K11Q16584 847 aa16.06■□□□□ 0.16
CAPN1-223ENST00000533079 SCAF8Q9UPN6 1271 aaKnown RBP16.06■□□□□ 0.16
CAPN1-223ENST00000533079 TRIM17Q9Y577 477 aa16.06■□□□□ 0.16
CAPN1-223ENST00000533079 PPP2R3BQ9Y5P8 575 aa16.06■□□□□ 0.16
CAPN1-223ENST00000533079 SASH1O94885 1247 aa16.05■□□□□ 0.16
CAPN1-223ENST00000533079 CCT4P50991 539 aaKnown RBP16.05■□□□□ 0.16
CAPN1-223ENST00000533079 OTOP1Q7RTM1 612 aa16.05■□□□□ 0.16
CAPN1-223ENST00000533079 IFNL1Q8IU54 200 aa16.05■□□□□ 0.16
CAPN1-223ENST00000533079 ERO1AQ96HE7 468 aa16.05■□□□□ 0.16
CAPN1-223ENST00000533079 METTL22Q9BUU2 404 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-223ENST00000533079 LEMD3Q9Y2U8 911 aa16.05■□□□□ 0.16
CAPN1-223ENST00000533079 CCDC146Q8IYE0 955 aa16.04■□□□□ 0.16
CAPN1-223ENST00000533079 CCDC85AQ96PX6 553 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-223ENST00000533079 PHAXQ9H814 394 aaKnown RBP16.04■□□□□ 0.16
CAPN1-223ENST00000533079 MBIPQ9NS73 344 aa16.04■□□□□ 0.16
CAPN1-223ENST00000533079 ANGEL1Q9UNK9 670 aaKnown RBP16.04■□□□□ 0.16
CAPN1-223ENST00000533079 MINPP1Q9UNW1 487 aa16.04■□□□□ 0.16
CAPN1-223ENST00000533079 ZNF316A6NFI3 1004 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-223ENST00000533079 FBXW7Q969H0 707 aa16.03■□□□□ 0.16
CAPN1-223ENST00000533079 ZBED3Q96IU2 234 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-223ENST00000533079 R3HDMLQ9H3Y0 253 aa16.03■□□□□ 0.16
CAPN1-223ENST00000533079 SSC5DA1L4H1 1573 aa16.03■□□□□ 0.16
CAPN1-223ENST00000533079 MYBBP1AQ9BQG0 1328 aaKnown RBP16.02■□□□□ 0.16
CAPN1-223ENST00000533079 POTEFA5A3E0 1075 aa16.02■□□□□ 0.16
CAPN1-223ENST00000533079 PPP1R12BO60237 982 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-223ENST00000533079 CALD1Q05682 793 aaKnown RBP16.02■□□□□ 0.16
CAPN1-223ENST00000533079 WDR43Q15061 677 aaKnown RBP eCLIP16.02■□□□□ 0.16
CAPN1-223ENST00000533079 TTLL5Q6EMB2 1281 aa16.02■□□□□ 0.16
CAPN1-223ENST00000533079 OTUD7BQ6GQQ9 843 aa16.02■□□□□ 0.16
CAPN1-223ENST00000533079 ARMC5Q96C12 935 aa16.02■□□□□ 0.16
CAPN1-223ENST00000533079 SLC10A4Q96EP9 437 aa16.02■□□□□ 0.16
CAPN1-223ENST00000533079 MXD3Q9BW11 206 aa16.02■□□□□ 0.16
CAPN1-223ENST00000533079 IFT57Q9NWB7 429 aa16.02■□□□□ 0.16
CAPN1-223ENST00000533079 PTPN22Q9Y2R2 807 aa16.02■□□□□ 0.16
CAPN1-223ENST00000533079 ZNF853P0CG23 659 aa16.01■□□□□ 0.15
CAPN1-223ENST00000533079 PRKG1Q13976 671 aa16.01■□□□□ 0.15
CAPN1-223ENST00000533079 KIAA0825Q8IV33 1275 aa16.01■□□□□ 0.15
CAPN1-223ENST00000533079 MTMR14Q8NCE2 650 aa16.01■□□□□ 0.15
CAPN1-223ENST00000533079 TTLL11Q8NHH1 800 aa16.01■□□□□ 0.15
CAPN1-223ENST00000533079 WNK4Q96J92 1243 aa16.01■□□□□ 0.15
CAPN1-223ENST00000533079 ANKRD2Q9GZV1 360 aa16.01■□□□□ 0.15
CAPN1-223ENST00000533079 DEFB129Q9H1M3 183 aa16.01■□□□□ 0.15
CAPN1-223ENST00000533079 GREM2Q9H772 168 aa16.01■□□□□ 0.15
CAPN1-223ENST00000533079 ZNF804BA4D1E1 1349 aa16■□□□□ 0.15
CAPN1-223ENST00000533079 IGF2BP3O00425 579 aaKnown RBP eCLIP16■□□□□ 0.15
CAPN1-223ENST00000533079 IGHMBP2P38935 993 aaKnown RBP16■□□□□ 0.15
CAPN1-223ENST00000533079 GNAI1P63096 354 aa16■□□□□ 0.15
CAPN1-223ENST00000533079 MYO1BO43795 1136 aa15.99■□□□□ 0.15
CAPN1-223ENST00000533079 FXR1P51114 621 aaKnown RBP eCLIP15.99■□□□□ 0.15
CAPN1-223ENST00000533079 NEXNQ0ZGT2 675 aa15.99■□□□□ 0.15
CAPN1-223ENST00000533079 DLGAP5Q15398 846 aa15.99■□□□□ 0.15
CAPN1-223ENST00000533079 SUPT20HL1Q3ZLR7 823 aa15.99■□□□□ 0.15
CAPN1-223ENST00000533079 CCDC30Q5VVM6 783 aa15.99■□□□□ 0.15
CAPN1-223ENST00000533079 WTIPA6NIX2 430 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-223ENST00000533079 CRHR2Q13324 411 aa15.98■□□□□ 0.15
CAPN1-223ENST00000533079 ARHGEF6Q15052 776 aa15.98■□□□□ 0.15
CAPN1-223ENST00000533079 TXNRD3Q86VQ6 643 aa15.98■□□□□ 0.15
CAPN1-223ENST00000533079 EFCC1Q9HA90 598 aa15.98■□□□□ 0.15
CAPN1-223ENST00000533079 MAP3K2Q9Y2U5 619 aa15.98■□□□□ 0.15
CAPN1-223ENST00000533079 OTOFQ9HC10 1997 aa15.97■□□□□ 0.15
CAPN1-223ENST00000533079 IGKV5-2P06315 115 aa15.97■□□□□ 0.15
CAPN1-223ENST00000533079 IREB2P48200 963 aaKnown RBP15.97■□□□□ 0.15
CAPN1-223ENST00000533079 GTF2IP78347 998 aa15.97■□□□□ 0.15
CAPN1-223ENST00000533079 KSR2Q6VAB6 950 aa15.97■□□□□ 0.15
CAPN1-223ENST00000533079 CD99L2Q8TCZ2 262 aa15.97■□□□□ 0.15
CAPN1-223ENST00000533079 JARID2Q92833 1246 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-223ENST00000533079 A0A1B0GUL6 1792 aa15.97■□□□□ 0.15
CAPN1-223ENST00000533079 TESPA1A2RU30 521 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-223ENST00000533079 FKBP1AP62942 108 aaKnown RBP15.96■□□□□ 0.15
CAPN1-223ENST00000533079 SP3Q02447 781 aa15.96■□□□□ 0.15
CAPN1-223ENST00000533079 ANKRD13AQ8IZ07 590 aa15.96■□□□□ 0.15
CAPN1-223ENST00000533079 CLMNQ96JQ2 1002 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 384.9 ms