RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 WNT10BO00744 389 aa18.7■□□□□ 0.58
CDC27-209ENST00000532893 FKTNO75072 461 aa18.7■□□□□ 0.58
CDC27-209ENST00000532893 NF2P35240 595 aa18.7■□□□□ 0.58
CDC27-209ENST00000532893 PTPN12Q05209 780 aaKnown RBP18.7■□□□□ 0.58
CDC27-209ENST00000532893 PRKG1Q13976 671 aa18.7■□□□□ 0.58
CDC27-209ENST00000532893 RALBP1Q15311 655 aa18.7■□□□□ 0.58
CDC27-209ENST00000532893 NOM1Q5C9Z4 860 aaKnown RBP18.7■□□□□ 0.58
CDC27-209ENST00000532893 OGFOD1Q8N543 542 aa18.7■□□□□ 0.58
CDC27-209ENST00000532893 FBXW7Q969H0 707 aa18.7■□□□□ 0.58
CDC27-209ENST00000532893 MBIPQ9NS73 344 aa18.7■□□□□ 0.58
CDC27-209ENST00000532893 CWC25Q9NXE8 425 aaPredicted RBP18.7■□□□□ 0.58
CDC27-209ENST00000532893 ELL2O00472 640 aaPredicted RBP18.69■□□□□ 0.58
CDC27-209ENST00000532893 SREBF2Q12772 1141 aa18.69■□□□□ 0.58
CDC27-209ENST00000532893 DACT2Q5SW24 774 aa18.69■□□□□ 0.58
CDC27-209ENST00000532893 ARMC9Q7Z3E5 817 aa18.68■□□□□ 0.58
CDC27-209ENST00000532893 MINPP1Q9UNW1 487 aa18.68■□□□□ 0.58
CDC27-209ENST00000532893 CDC5LQ99459 802 aaKnown RBP18.67■□□□□ 0.58
CDC27-209ENST00000532893 SASH1O94885 1247 aa18.66■□□□□ 0.58
CDC27-209ENST00000532893 STRIP1Q5VSL9 837 aa18.66■□□□□ 0.58
CDC27-209ENST00000532893 METTL22Q9BUU2 404 aaPredicted RBP18.66■□□□□ 0.58
CDC27-209ENST00000532893 CFHR5Q9BXR6 569 aa18.66■□□□□ 0.58
CDC27-209ENST00000532893 BSDC1Q9NW68 430 aaPredicted RBP18.66■□□□□ 0.58
CDC27-209ENST00000532893 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.66■□□□□ 0.58
CDC27-209ENST00000532893 CCT4P50991 539 aaKnown RBP18.65■□□□□ 0.58
CDC27-209ENST00000532893 CTSWP56202 376 aa18.65■□□□□ 0.58
CDC27-209ENST00000532893 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
CDC27-209ENST00000532893 LDLRAD1Q5T700 205 aa18.65■□□□□ 0.58
CDC27-209ENST00000532893 SPRYD7Q5W111 196 aa18.65■□□□□ 0.58
CDC27-209ENST00000532893 TXNRD3Q86VQ6 643 aa18.65■□□□□ 0.58
CDC27-209ENST00000532893 GCC1Q96CN9 775 aa18.65■□□□□ 0.58
CDC27-209ENST00000532893 ADAMTS8Q9UP79 889 aa18.65■□□□□ 0.58
CDC27-209ENST00000532893 MKI67P46013 3256 aaKnown RBP18.65■□□□□ 0.58
CDC27-209ENST00000532893 MED23Q9ULK4 1368 aa18.65■□□□□ 0.58
CDC27-209ENST00000532893 ZNF853P0CG23 659 aa18.64■□□□□ 0.57
CDC27-209ENST00000532893 TTLL5Q6EMB2 1281 aa18.64■□□□□ 0.57
CDC27-209ENST00000532893 TTLL11Q8NHH1 800 aa18.64■□□□□ 0.57
CDC27-209ENST00000532893 COA1Q9GZY4 146 aa18.64■□□□□ 0.57
CDC27-209ENST00000532893 GREM2Q9H772 168 aa18.64■□□□□ 0.57
CDC27-209ENST00000532893 ANGEL1Q9UNK9 670 aaKnown RBP18.64■□□□□ 0.57
CDC27-209ENST00000532893 FZD1Q9UP38 647 aa18.64■□□□□ 0.57
CDC27-209ENST00000532893 MYO3BQ8WXR4 1341 aa18.64■□□□□ 0.57
CDC27-209ENST00000532893 PSME4Q14997 1843 aa18.63■□□□□ 0.57
CDC27-209ENST00000532893 KIAA0825Q8IV33 1275 aa18.63■□□□□ 0.57
CDC27-209ENST00000532893 SLC10A4Q96EP9 437 aa18.63■□□□□ 0.57
CDC27-209ENST00000532893 TRIM17Q9Y577 477 aa18.63■□□□□ 0.57
CDC27-209ENST00000532893 DDX58O95786 925 aaKnown RBP18.62■□□□□ 0.57
CDC27-209ENST00000532893 ALDH1A1P00352 501 aa18.62■□□□□ 0.57
CDC27-209ENST00000532893 APOBEC3FQ8IUX4 373 aaKnown RBP18.62■□□□□ 0.57
CDC27-209ENST00000532893 MAP3K2Q9Y2U5 619 aa18.62■□□□□ 0.57
CDC27-209ENST00000532893 POTEFA5A3E0 1075 aa18.61■□□□□ 0.57
CDC27-209ENST00000532893 MMP14P50281 582 aa18.61■□□□□ 0.57
CDC27-209ENST00000532893 HABP4Q5JVS0 413 aaKnown RBP18.61■□□□□ 0.57
CDC27-209ENST00000532893 OTOP1Q7RTM1 612 aa18.61■□□□□ 0.57
CDC27-209ENST00000532893 IFNL1Q8IU54 200 aa18.61■□□□□ 0.57
CDC27-209ENST00000532893 C8orf58Q8NAV2 365 aa18.61■□□□□ 0.57
CDC27-209ENST00000532893 HTTP42858 3142 aa18.6■□□□□ 0.57
CDC27-209ENST00000532893 MYBBP1AQ9BQG0 1328 aaKnown RBP18.6■□□□□ 0.57
CDC27-209ENST00000532893 MANSC4A6NHS7 340 aaPredicted RBP18.6■□□□□ 0.57
CDC27-209ENST00000532893 IGKV5-2P06315 115 aa18.6■□□□□ 0.57
CDC27-209ENST00000532893 INHBEP58166 350 aa18.6■□□□□ 0.57
CDC27-209ENST00000532893 GNAI1P63096 354 aa18.6■□□□□ 0.57
CDC27-209ENST00000532893 GTF2IP78347 998 aa18.6■□□□□ 0.57
CDC27-209ENST00000532893 ZBED3Q96IU2 234 aaPredicted RBP18.6■□□□□ 0.57
CDC27-209ENST00000532893 IFT57Q9NWB7 429 aa18.6■□□□□ 0.57
CDC27-209ENST00000532893 LEMD3Q9Y2U8 911 aa18.6■□□□□ 0.57
CDC27-209ENST00000532893 KLRK1P26718 216 aa18.59■□□□□ 0.57
CDC27-209ENST00000532893 INTS3Q68E01 1043 aaKnown RBP18.59■□□□□ 0.57
CDC27-209ENST00000532893 CLMNQ96JQ2 1002 aa18.59■□□□□ 0.57
CDC27-209ENST00000532893 DEFB129Q9H1M3 183 aa18.59■□□□□ 0.57
CDC27-209ENST00000532893 KIAA0100Q14667 2235 aaKnown RBP18.58■□□□□ 0.57
CDC27-209ENST00000532893 ZNF804BA4D1E1 1349 aa18.58■□□□□ 0.57
CDC27-209ENST00000532893 PI4KAP2A4QPH2 592 aa18.58■□□□□ 0.56
CDC27-209ENST00000532893 IGHMBP2P38935 993 aaKnown RBP18.58■□□□□ 0.56
CDC27-209ENST00000532893 CCDC30Q5VVM6 783 aa18.58■□□□□ 0.56
CDC27-209ENST00000532893 KSR2Q6VAB6 950 aa18.58■□□□□ 0.56
CDC27-209ENST00000532893 PI4KAP1Q8N8J0 262 aa18.58■□□□□ 0.56
CDC27-209ENST00000532893 RNF39Q9H2S5 420 aa18.58■□□□□ 0.56
CDC27-209ENST00000532893 CENPFP49454 3210 aa18.57■□□□□ 0.56
CDC27-209ENST00000532893 IGF2BP3O00425 579 aaKnown RBP eCLIP18.57■□□□□ 0.56
CDC27-209ENST00000532893 DLGAP5Q15398 846 aa18.57■□□□□ 0.56
CDC27-209ENST00000532893 CWF19L2Q2TBE0 894 aaKnown RBP18.57■□□□□ 0.56
CDC27-209ENST00000532893 WNK4Q96J92 1243 aa18.57■□□□□ 0.56
CDC27-209ENST00000532893 APAF1O14727 1248 aa18.56■□□□□ 0.56
CDC27-209ENST00000532893 PPP1R12BO60237 982 aaPredicted RBP18.56■□□□□ 0.56
CDC27-209ENST00000532893 NEXNQ0ZGT2 675 aa18.56■□□□□ 0.56
CDC27-209ENST00000532893 MAP3K11Q16584 847 aa18.56■□□□□ 0.56
CDC27-209ENST00000532893 ANKRD2Q9GZV1 360 aa18.56■□□□□ 0.56
CDC27-209ENST00000532893 PTPN22Q9Y2R2 807 aa18.56■□□□□ 0.56
CDC27-209ENST00000532893 ZBTB48P10074 688 aaPredicted RBP18.55■□□□□ 0.56
CDC27-209ENST00000532893 CALD1Q05682 793 aaKnown RBP18.55■□□□□ 0.56
CDC27-209ENST00000532893 UBE3BQ7Z3V4 1068 aa18.55■□□□□ 0.56
CDC27-209ENST00000532893 TSPYL6Q8N831 410 aa18.55■□□□□ 0.56
CDC27-209ENST00000532893 CD99L2Q8TCZ2 262 aa18.55■□□□□ 0.56
CDC27-209ENST00000532893 CHMP4AQ9BY43 222 aa18.55■□□□□ 0.56
CDC27-209ENST00000532893 CD209Q9NNX6 404 aa18.55■□□□□ 0.56
CDC27-209ENST00000532893 PCDHAC2Q9Y5I4 1007 aa18.55■□□□□ 0.56
CDC27-209ENST00000532893 NEURL1BA8MQ27 555 aa18.54■□□□□ 0.56
CDC27-209ENST00000532893 H7C1W4 665 aa18.54■□□□□ 0.56
CDC27-209ENST00000532893 EN2P19622 333 aaPredicted RBP18.54■□□□□ 0.56
CDC27-209ENST00000532893 ITGA6P23229 1130 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms