RNA–Protein interactions for RNA: ENST00000532652.1

AP004550.1-201, humanhuman

TSL 3 BASIC

Gene AP004550.1, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004550.1-201ENST00000532652 MYD88Q99836 296 aa16.37■□□□□ 0.21
AP004550.1-201ENST00000532652 PHAXQ9H814 394 aaKnown RBP16.37■□□□□ 0.21
AP004550.1-201ENST00000532652 WTIPA6NIX2 430 aaPredicted RBP16.36■□□□□ 0.21
AP004550.1-201ENST00000532652 WNT10BO00744 389 aa16.36■□□□□ 0.21
AP004550.1-201ENST00000532652 PCCAP05165 728 aaPredicted RBP16.36■□□□□ 0.21
AP004550.1-201ENST00000532652 NF2P35240 595 aa16.36■□□□□ 0.21
AP004550.1-201ENST00000532652 CCDC191Q8NCU4 936 aa16.36■□□□□ 0.21
AP004550.1-201ENST00000532652 MXD3Q9BW11 206 aa16.36■□□□□ 0.21
AP004550.1-201ENST00000532652 R3HDMLQ9H3Y0 253 aa16.36■□□□□ 0.21
AP004550.1-201ENST00000532652 FKTNO75072 461 aa16.35■□□□□ 0.21
AP004550.1-201ENST00000532652 SREBF2Q12772 1141 aa16.35■□□□□ 0.21
AP004550.1-201ENST00000532652 CFHR5Q9BXR6 569 aa16.35■□□□□ 0.21
AP004550.1-201ENST00000532652 MED23Q9ULK4 1368 aa16.35■□□□□ 0.21
AP004550.1-201ENST00000532652 PTPN12Q05209 780 aaKnown RBP16.34■□□□□ 0.21
AP004550.1-201ENST00000532652 PRKG1Q13976 671 aa16.34■□□□□ 0.21
AP004550.1-201ENST00000532652 RALBP1Q15311 655 aa16.34■□□□□ 0.21
AP004550.1-201ENST00000532652 DACT2Q5SW24 774 aa16.34■□□□□ 0.21
AP004550.1-201ENST00000532652 OGFOD1Q8N543 542 aa16.34■□□□□ 0.21
AP004550.1-201ENST00000532652 FBXW7Q969H0 707 aa16.34■□□□□ 0.21
AP004550.1-201ENST00000532652 RUNDC1Q96C34 613 aa16.34■□□□□ 0.21
AP004550.1-201ENST00000532652 MBIPQ9NS73 344 aa16.34■□□□□ 0.21
AP004550.1-201ENST00000532652 CWC25Q9NXE8 425 aaPredicted RBP16.34■□□□□ 0.21
AP004550.1-201ENST00000532652 ARMC9Q7Z3E5 817 aa16.33■□□□□ 0.2
AP004550.1-201ENST00000532652 GCC1Q96CN9 775 aa16.33■□□□□ 0.2
AP004550.1-201ENST00000532652 SASH1O94885 1247 aa16.32■□□□□ 0.2
AP004550.1-201ENST00000532652 STRIP1Q5VSL9 837 aa16.32■□□□□ 0.2
AP004550.1-201ENST00000532652 MYO3BQ8WXR4 1341 aa16.32■□□□□ 0.2
AP004550.1-201ENST00000532652 CDC5LQ99459 802 aaKnown RBP16.32■□□□□ 0.2
AP004550.1-201ENST00000532652 MINPP1Q9UNW1 487 aa16.32■□□□□ 0.2
AP004550.1-201ENST00000532652 CCT4P50991 539 aaKnown RBP16.31■□□□□ 0.2
AP004550.1-201ENST00000532652 SPRYD7Q5W111 196 aa16.31■□□□□ 0.2
AP004550.1-201ENST00000532652 METTL22Q9BUU2 404 aaPredicted RBP16.31■□□□□ 0.2
AP004550.1-201ENST00000532652 SZT2Q5T011 3432 aa16.31■□□□□ 0.2
AP004550.1-201ENST00000532652 AK9Q5TCS8 1911 aa16.3■□□□□ 0.2
AP004550.1-201ENST00000532652 ELL2O00472 640 aaPredicted RBP16.3■□□□□ 0.2
AP004550.1-201ENST00000532652 CTSWP56202 376 aa16.3■□□□□ 0.2
AP004550.1-201ENST00000532652 LDLRAD1Q5T700 205 aa16.3■□□□□ 0.2
AP004550.1-201ENST00000532652 APOBEC3FQ8IUX4 373 aaKnown RBP16.3■□□□□ 0.2
AP004550.1-201ENST00000532652 BSDC1Q9NW68 430 aaPredicted RBP16.3■□□□□ 0.2
AP004550.1-201ENST00000532652 ANGEL1Q9UNK9 670 aaKnown RBP16.3■□□□□ 0.2
AP004550.1-201ENST00000532652 FZD1Q9UP38 647 aa16.3■□□□□ 0.2
AP004550.1-201ENST00000532652 ALDH1A1P00352 501 aa16.29■□□□□ 0.2
AP004550.1-201ENST00000532652 ZNF853P0CG23 659 aa16.29■□□□□ 0.2
AP004550.1-201ENST00000532652 WDR43Q15061 677 aaKnown RBP eCLIP16.29■□□□□ 0.2
AP004550.1-201ENST00000532652 TXNRD3Q86VQ6 643 aa16.29■□□□□ 0.2
AP004550.1-201ENST00000532652 TTLL11Q8NHH1 800 aa16.29■□□□□ 0.2
AP004550.1-201ENST00000532652 COA1Q9GZY4 146 aa16.29■□□□□ 0.2
AP004550.1-201ENST00000532652 GREM2Q9H772 168 aa16.29■□□□□ 0.2
AP004550.1-201ENST00000532652 TRIM17Q9Y577 477 aa16.29■□□□□ 0.2
AP004550.1-201ENST00000532652 COL1A1P02452 1464 aaPredicted RBP16.29■□□□□ 0.2
AP004550.1-201ENST00000532652 ZSWIM8A7E2V4 1837 aa16.29■□□□□ 0.2
AP004550.1-201ENST00000532652 MYBBP1AQ9BQG0 1328 aaKnown RBP16.28■□□□□ 0.2
AP004550.1-201ENST00000532652 POTEFA5A3E0 1075 aa16.28■□□□□ 0.2
AP004550.1-201ENST00000532652 DDX58O95786 925 aaKnown RBP16.28■□□□□ 0.2
AP004550.1-201ENST00000532652 MMP14P50281 582 aa16.28■□□□□ 0.2
AP004550.1-201ENST00000532652 HABP4Q5JVS0 413 aaKnown RBP16.28■□□□□ 0.2
AP004550.1-201ENST00000532652 TTLL5Q6EMB2 1281 aa16.28■□□□□ 0.2
AP004550.1-201ENST00000532652 OTOP1Q7RTM1 612 aa16.28■□□□□ 0.2
AP004550.1-201ENST00000532652 KIAA0825Q8IV33 1275 aa16.28■□□□□ 0.2
AP004550.1-201ENST00000532652 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
AP004550.1-201ENST00000532652 SSC5DA1L4H1 1573 aa16.27■□□□□ 0.2
AP004550.1-201ENST00000532652 MANSC4A6NHS7 340 aaPredicted RBP16.27■□□□□ 0.2
AP004550.1-201ENST00000532652 IFNL1Q8IU54 200 aa16.27■□□□□ 0.2
AP004550.1-201ENST00000532652 ZBED3Q96IU2 234 aaPredicted RBP16.27■□□□□ 0.2
AP004550.1-201ENST00000532652 ADAMTS8Q9UP79 889 aa16.27■□□□□ 0.2
AP004550.1-201ENST00000532652 MAP3K2Q9Y2U5 619 aa16.27■□□□□ 0.2
AP004550.1-201ENST00000532652 LEMD3Q9Y2U8 911 aa16.27■□□□□ 0.2
AP004550.1-201ENST00000532652 ARAP2Q8WZ64 1704 aa16.27■□□□□ 0.19
AP004550.1-201ENST00000532652 IGF2BP3O00425 579 aaKnown RBP eCLIP16.26■□□□□ 0.19
AP004550.1-201ENST00000532652 IGKV5-2P06315 115 aa16.26■□□□□ 0.19
AP004550.1-201ENST00000532652 KLRK1P26718 216 aa16.26■□□□□ 0.19
AP004550.1-201ENST00000532652 INHBEP58166 350 aa16.26■□□□□ 0.19
AP004550.1-201ENST00000532652 INTS3Q68E01 1043 aaKnown RBP16.26■□□□□ 0.19
AP004550.1-201ENST00000532652 SLC10A4Q96EP9 437 aa16.26■□□□□ 0.19
AP004550.1-201ENST00000532652 IFT57Q9NWB7 429 aa16.26■□□□□ 0.19
AP004550.1-201ENST00000532652 ZNF804BA4D1E1 1349 aa16.25■□□□□ 0.19
AP004550.1-201ENST00000532652 ZBTB48P10074 688 aaPredicted RBP16.25■□□□□ 0.19
AP004550.1-201ENST00000532652 GNAI1P63096 354 aa16.25■□□□□ 0.19
AP004550.1-201ENST00000532652 GTF2IP78347 998 aa16.25■□□□□ 0.19
AP004550.1-201ENST00000532652 MAP3K11Q16584 847 aa16.25■□□□□ 0.19
AP004550.1-201ENST00000532652 C8orf58Q8NAV2 365 aa16.25■□□□□ 0.19
AP004550.1-201ENST00000532652 WNK4Q96J92 1243 aa16.25■□□□□ 0.19
AP004550.1-201ENST00000532652 CLMNQ96JQ2 1002 aa16.25■□□□□ 0.19
AP004550.1-201ENST00000532652 DEFB129Q9H1M3 183 aa16.25■□□□□ 0.19
AP004550.1-201ENST00000532652 MYH13Q9UKX3 1938 aa16.24■□□□□ 0.19
AP004550.1-201ENST00000532652 PI4KAP2A4QPH2 592 aa16.24■□□□□ 0.19
AP004550.1-201ENST00000532652 IGHMBP2P38935 993 aaKnown RBP16.24■□□□□ 0.19
AP004550.1-201ENST00000532652 KSR2Q6VAB6 950 aa16.24■□□□□ 0.19
AP004550.1-201ENST00000532652 PI4KAP1Q8N8J0 262 aa16.24■□□□□ 0.19
AP004550.1-201ENST00000532652 CCDC30Q5VVM6 783 aa16.23■□□□□ 0.19
AP004550.1-201ENST00000532652 CD99L2Q8TCZ2 262 aa16.23■□□□□ 0.19
AP004550.1-201ENST00000532652 ERO1AQ96HE7 468 aa16.23■□□□□ 0.19
AP004550.1-201ENST00000532652 PTPN22Q9Y2R2 807 aa16.23■□□□□ 0.19
AP004550.1-201ENST00000532652 DOCK3Q8IZD9 2030 aa16.23■□□□□ 0.19
AP004550.1-201ENST00000532652 MGAMO43451 1857 aa16.22■□□□□ 0.19
AP004550.1-201ENST00000532652 PPP1R12BO60237 982 aaPredicted RBP16.22■□□□□ 0.19
AP004550.1-201ENST00000532652 NEXNQ0ZGT2 675 aa16.22■□□□□ 0.19
AP004550.1-201ENST00000532652 DLGAP5Q15398 846 aa16.22■□□□□ 0.19
AP004550.1-201ENST00000532652 CWF19L2Q2TBE0 894 aaKnown RBP16.22■□□□□ 0.19
AP004550.1-201ENST00000532652 ANKRD2Q9GZV1 360 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms