RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 KAZALD1Q96I82 304 aa21.7■■□□□ 1.06
PHRF1-204ENST00000532550 CNTNAP1P78357 1384 aa21.7■■□□□ 1.06
PHRF1-204ENST00000532550 PLIN1O60240 522 aa21.69■■□□□ 1.06
PHRF1-204ENST00000532550 NOB1Q9ULX3 412 aaKnown RBP21.69■■□□□ 1.06
PHRF1-204ENST00000532550 PCNTO95613 3336 aa21.68■■□□□ 1.06
PHRF1-204ENST00000532550 EGFRP00533 1210 aa21.68■■□□□ 1.06
PHRF1-204ENST00000532550 USP17L8P0C7I0 530 aa21.68■■□□□ 1.06
PHRF1-204ENST00000532550 KIF4BQ2VIQ3 1234 aa21.68■■□□□ 1.06
PHRF1-204ENST00000532550 STRIP1Q5VSL9 837 aa21.68■■□□□ 1.06
PHRF1-204ENST00000532550 CST9Q5W186 159 aa21.68■■□□□ 1.06
PHRF1-204ENST00000532550 USP48Q86UV5 1035 aa21.68■■□□□ 1.06
PHRF1-204ENST00000532550 DCPSQ96C86 337 aaKnown RBP21.68■■□□□ 1.06
PHRF1-204ENST00000532550 USP44Q9H0E7 712 aa21.68■■□□□ 1.06
PHRF1-204ENST00000532550 BICC1Q9H694 974 aaKnown RBP21.68■■□□□ 1.06
PHRF1-204ENST00000532550 RASSF10A6NK89 507 aa21.67■■□□□ 1.06
PHRF1-204ENST00000532550 CELF2O95319 508 aaKnown RBP21.67■■□□□ 1.06
PHRF1-204ENST00000532550 KLRK1P26718 216 aa21.67■■□□□ 1.06
PHRF1-204ENST00000532550 VEGFBP49765 207 aa21.67■■□□□ 1.06
PHRF1-204ENST00000532550 BRPF1P55201 1214 aaPredicted RBP21.67■■□□□ 1.06
PHRF1-204ENST00000532550 ZNF280AP59817 542 aaPredicted RBP21.67■■□□□ 1.06
PHRF1-204ENST00000532550 TTLL5Q6EMB2 1281 aa21.67■■□□□ 1.06
PHRF1-204ENST00000532550 GMLQ99445 158 aa21.67■■□□□ 1.06
PHRF1-204ENST00000532550 API5Q9BZZ5 524 aaKnown RBP21.67■■□□□ 1.06
PHRF1-204ENST00000532550 POLR2AP24928 1970 aaKnown RBP21.67■■□□□ 1.06
PHRF1-204ENST00000532550 TRPM7Q96QT4 1865 aa21.66■■□□□ 1.06
PHRF1-204ENST00000532550 SNAP23O00161 211 aa21.66■■□□□ 1.06
PHRF1-204ENST00000532550 RARSP54136 660 aaKnown RBP21.66■■□□□ 1.06
PHRF1-204ENST00000532550 DACT2Q5SW24 774 aa21.66■■□□□ 1.06
PHRF1-204ENST00000532550 PSME4Q14997 1843 aa21.65■■□□□ 1.06
PHRF1-204ENST00000532550 HNRNPUQ00839 825 aaKnown RBP eCLIP21.65■■□□□ 1.06
PHRF1-204ENST00000532550 RABL6Q3YEC7 729 aaPredicted RBP21.65■■□□□ 1.06
PHRF1-204ENST00000532550 C15orf52Q6ZUT6 534 aaKnown RBP21.65■■□□□ 1.06
PHRF1-204ENST00000532550 KRT26Q7Z3Y9 468 aa21.65■■□□□ 1.06
PHRF1-204ENST00000532550 OGFOD1Q8N543 542 aa21.65■■□□□ 1.06
PHRF1-204ENST00000532550 ZNF408Q9H9D4 720 aa21.65■■□□□ 1.06
PHRF1-204ENST00000532550 CD209Q9NNX6 404 aa21.65■■□□□ 1.06
PHRF1-204ENST00000532550 MYOZ2Q9NPC6 264 aa21.65■■□□□ 1.06
PHRF1-204ENST00000532550 ZNF609O15014 1411 aa21.64■■□□□ 1.06
PHRF1-204ENST00000532550 MYO3BQ8WXR4 1341 aa21.64■■□□□ 1.05
PHRF1-204ENST00000532550 GTF2IP78347 998 aa21.64■■□□□ 1.05
PHRF1-204ENST00000532550 SCARF1Q14162 830 aa21.64■■□□□ 1.05
PHRF1-204ENST00000532550 PAXIP1Q6ZW49 1069 aaPredicted RBP21.64■■□□□ 1.05
PHRF1-204ENST00000532550 ZNF804AQ7Z570 1209 aa21.64■■□□□ 1.05
PHRF1-204ENST00000532550 MXD3Q9BW11 206 aa21.64■■□□□ 1.05
PHRF1-204ENST00000532550 HSPA1AP0DMV8 641 aaKnown RBP21.63■■□□□ 1.05
PHRF1-204ENST00000532550 HSPA1BP0DMV9 641 aaKnown RBP21.63■■□□□ 1.05
PHRF1-204ENST00000532550 ANKRD44Q8N8A2 993 aa21.63■■□□□ 1.05
PHRF1-204ENST00000532550 PUS3Q9BZE2 481 aaKnown RBP21.63■■□□□ 1.05
PHRF1-204ENST00000532550 TLL2Q9Y6L7 1015 aa21.63■■□□□ 1.05
PHRF1-204ENST00000532550 MMP14P50281 582 aa21.62■■□□□ 1.05
PHRF1-204ENST00000532550 SULF1Q8IWU6 871 aa21.62■■□□□ 1.05
PHRF1-204ENST00000532550 MROH5Q6ZUA9 1318 aa21.61■■□□□ 1.05
PHRF1-204ENST00000532550 WDR33Q9C0J8 1336 aaKnown RBP21.61■■□□□ 1.05
PHRF1-204ENST00000532550 ECE1P42892 770 aa21.61■■□□□ 1.05
PHRF1-204ENST00000532550 UBE4AQ14139 1066 aa21.61■■□□□ 1.05
PHRF1-204ENST00000532550 ARHGAP45Q92619 1136 aa21.61■■□□□ 1.05
PHRF1-204ENST00000532550 GGA3Q9NZ52 723 aa21.61■■□□□ 1.05
PHRF1-204ENST00000532550 RIPOR2Q9Y4F9 1068 aa21.61■■□□□ 1.05
PHRF1-204ENST00000532550 KIF16BQ96L93 1317 aa21.6■■□□□ 1.05
PHRF1-204ENST00000532550 IRS2Q9Y4H2 1338 aa21.6■■□□□ 1.05
PHRF1-204ENST00000532550 UBTFL1P0CB47 393 aaPredicted RBP21.6■■□□□ 1.05
PHRF1-204ENST00000532550 SAPCD2Q86UD0 394 aa21.6■■□□□ 1.05
PHRF1-204ENST00000532550 HDAC9Q9UKV0 1011 aa21.6■■□□□ 1.05
PHRF1-204ENST00000532550 HDAC5Q9UQL6 1122 aa21.6■■□□□ 1.05
PHRF1-204ENST00000532550 ASTN2O75129 1339 aaPredicted RBP21.59■■□□□ 1.05
PHRF1-204ENST00000532550 IPO8O15397 1037 aaKnown RBP21.59■■□□□ 1.05
PHRF1-204ENST00000532550 IL1R1P14778 569 aa21.59■■□□□ 1.05
PHRF1-204ENST00000532550 GRM1Q13255 1194 aa21.59■■□□□ 1.05
PHRF1-204ENST00000532550 ANGEL2Q5VTE6 544 aaKnown RBP21.59■■□□□ 1.05
PHRF1-204ENST00000532550 DLK2Q6UY11 383 aa21.59■■□□□ 1.05
PHRF1-204ENST00000532550 ADM5C9JUS6 153 aa21.58■■□□□ 1.05
PHRF1-204ENST00000532550 LRRC24Q50LG9 513 aa21.58■■□□□ 1.05
PHRF1-204ENST00000532550 METTL24Q5JXM2 366 aa21.58■■□□□ 1.05
PHRF1-204ENST00000532550 CYP4F22Q6NT55 531 aa21.58■■□□□ 1.05
PHRF1-204ENST00000532550 KIAA0825Q8IV33 1275 aa21.58■■□□□ 1.05
PHRF1-204ENST00000532550 CAPNS2Q96L46 248 aa21.58■■□□□ 1.05
PHRF1-204ENST00000532550 HIBADHP31937 336 aaKnown RBP21.57■■□□□ 1.04
PHRF1-204ENST00000532550 C2orf69Q8N8R5 385 aa21.57■■□□□ 1.04
PHRF1-204ENST00000532550 KLHDC4Q8TBB5 520 aa21.57■■□□□ 1.04
PHRF1-204ENST00000532550 A0A1B0GUL6 1792 aa21.56■■□□□ 1.04
PHRF1-204ENST00000532550 SASH1O94885 1247 aa21.56■■□□□ 1.04
PHRF1-204ENST00000532550 NBPF9Q3BBW0 867 aa21.56■■□□□ 1.04
PHRF1-204ENST00000532550 FRAT1Q92837 279 aaPredicted RBP21.56■■□□□ 1.04
PHRF1-204ENST00000532550 AIDAQ96BJ3 306 aa21.56■■□□□ 1.04
PHRF1-204ENST00000532550 HHIPL1Q96JK4 782 aa21.56■■□□□ 1.04
PHRF1-204ENST00000532550 BCAR3O75815 825 aa21.55■■□□□ 1.04
PHRF1-204ENST00000532550 PDE8BO95263 885 aa21.55■■□□□ 1.04
PHRF1-204ENST00000532550 GYG1P46976 350 aa21.55■■□□□ 1.04
PHRF1-204ENST00000532550 MAP2K1Q02750 393 aaPredicted RBP21.55■■□□□ 1.04
PHRF1-204ENST00000532550 VPS37DQ86XT2 251 aa21.55■■□□□ 1.04
PHRF1-204ENST00000532550 FAM84BQ96KN1 310 aaPredicted RBP21.55■■□□□ 1.04
PHRF1-204ENST00000532550 GBA2Q9HCG7 927 aaPredicted RBP21.55■■□□□ 1.04
PHRF1-204ENST00000532550 PITPNM2Q9BZ72 1349 aa21.55■■□□□ 1.04
PHRF1-204ENST00000532550 WNT10BO00744 389 aa21.54■■□□□ 1.04
PHRF1-204ENST00000532550 HUNKP57058 714 aa21.54■■□□□ 1.04
PHRF1-204ENST00000532550 INTS3Q68E01 1043 aaKnown RBP21.54■■□□□ 1.04
PHRF1-204ENST00000532550 WBP1LQ9NX94 342 aa21.54■■□□□ 1.04
PHRF1-204ENST00000532550 EYA2O00167 538 aa21.53■■□□□ 1.04
PHRF1-204ENST00000532550 FKBP1AP62942 108 aaKnown RBP21.53■■□□□ 1.04
PHRF1-204ENST00000532550 CAVIN4Q5BKX8 364 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms