RNA–Protein interactions for RNA: ENST00000532330.5

BRPF3-209, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-209ENST00000532330 TPTE2Q6XPS3 522 aa13.05□□□□□ -0.32
BRPF3-209ENST00000532330 GREM2Q9H772 168 aa13.05□□□□□ -0.32
BRPF3-209ENST00000532330 FBXL16Q8N461 479 aa13.04□□□□□ -0.32
BRPF3-209ENST00000532330 CERKQ8TCT0 537 aa13.04□□□□□ -0.32
BRPF3-209ENST00000532330 SETDB2Q96T68 719 aa13.04□□□□□ -0.32
BRPF3-209ENST00000532330 STX6O43752 255 aa13.04□□□□□ -0.32
BRPF3-209ENST00000532330 UBE4AQ14139 1066 aa13.04□□□□□ -0.32
BRPF3-209ENST00000532330 CAVIN4Q5BKX8 364 aa13.04□□□□□ -0.32
BRPF3-209ENST00000532330 SLC4A9Q96Q91 983 aa13.04□□□□□ -0.32
BRPF3-209ENST00000532330 MYH3P11055 1940 aa13.04□□□□□ -0.32
BRPF3-209ENST00000532330 ZNF594Q96JF6 807 aaPredicted RBP13.04□□□□□ -0.32
BRPF3-209ENST00000532330 MTA3Q9BTC8 594 aa13.03□□□□□ -0.32
BRPF3-209ENST00000532330 RASEFQ8IZ41 740 aa13.03□□□□□ -0.32
BRPF3-209ENST00000532330 NLRP3Q96P20 1036 aa13.03□□□□□ -0.32
BRPF3-209ENST00000532330 LRP5O75197 1615 aa13.03□□□□□ -0.32
BRPF3-209ENST00000532330 BCL9LQ86UU0 1499 aa13.03□□□□□ -0.32
BRPF3-209ENST00000532330 LAMB2P55268 1798 aa13.03□□□□□ -0.32
BRPF3-209ENST00000532330 SUSD4Q5VX71 490 aa13.03□□□□□ -0.32
BRPF3-209ENST00000532330 NUP98P52948 1817 aa13.03□□□□□ -0.32
BRPF3-209ENST00000532330 ATRNO75882 1429 aa13.03□□□□□ -0.32
BRPF3-209ENST00000532330 NTSR2O95665 410 aa13.03□□□□□ -0.32
BRPF3-209ENST00000532330 CERS3Q8IU89 383 aa13.03□□□□□ -0.32
BRPF3-209ENST00000532330 FAM184AQ8NB25 1140 aa13.03□□□□□ -0.32
BRPF3-209ENST00000532330 ZSCAN16Q9H4T2 348 aaPredicted RBP13.03□□□□□ -0.32
BRPF3-209ENST00000532330 CNNM2Q9H8M5 875 aa13.03□□□□□ -0.32
BRPF3-209ENST00000532330 PDS5AQ29RF7 1337 aaKnown RBP13.02□□□□□ -0.32
BRPF3-209ENST00000532330 CDKL5O76039 1030 aa13.02□□□□□ -0.32
BRPF3-209ENST00000532330 ALX1Q15699 326 aa13.02□□□□□ -0.32
BRPF3-209ENST00000532330 SLC27A3Q5K4L6 730 aa13.02□□□□□ -0.32
BRPF3-209ENST00000532330 TMEM87AQ8NBN3 555 aa13.02□□□□□ -0.32
BRPF3-209ENST00000532330 NCOA7Q8NI08 942 aa13.02□□□□□ -0.32
BRPF3-209ENST00000532330 CCNL1Q9UK58 526 aaPredicted RBP13.02□□□□□ -0.32
BRPF3-209ENST00000532330 ZNF274Q96GC6 653 aaPredicted RBP13.02□□□□□ -0.33
BRPF3-209ENST00000532330 GJD4Q96KN9 370 aaPredicted RBP13.02□□□□□ -0.33
BRPF3-209ENST00000532330 PUS3Q9BZE2 481 aaKnown RBP13.02□□□□□ -0.33
BRPF3-209ENST00000532330 RNF41Q9H4P4 317 aaPredicted RBP13.02□□□□□ -0.33
BRPF3-209ENST00000532330 NPHP1O15259 732 aa13.02□□□□□ -0.33
BRPF3-209ENST00000532330 DENND2AQ9ULE3 1009 aa13.02□□□□□ -0.33
BRPF3-209ENST00000532330 NHSQ6T4R5 1651 aa13.02□□□□□ -0.33
BRPF3-209ENST00000532330 RIC1Q4ADV7 1423 aa13.01□□□□□ -0.33
BRPF3-209ENST00000532330 ZNF213O14771 459 aa13.01□□□□□ -0.33
BRPF3-209ENST00000532330 MCM5P33992 734 aa13.01□□□□□ -0.33
BRPF3-209ENST00000532330 ZGPATQ8N5A5 531 aaKnown RBP13.01□□□□□ -0.33
BRPF3-209ENST00000532330 ITPK1Q13572 414 aa13.01□□□□□ -0.33
BRPF3-209ENST00000532330 AIDAQ96BJ3 306 aa13.01□□□□□ -0.33
BRPF3-209ENST00000532330 BSDC1Q9NW68 430 aaPredicted RBP13.01□□□□□ -0.33
BRPF3-209ENST00000532330 THSD7AQ9UPZ6 1657 aa13.01□□□□□ -0.33
BRPF3-209ENST00000532330 PCP11498 1178 aaKnown RBP13.01□□□□□ -0.33
BRPF3-209ENST00000532330 LARP1BQ659C4 914 aaKnown RBP13.01□□□□□ -0.33
BRPF3-209ENST00000532330 SPTY2D1Q68D10 685 aaPredicted RBP13.01□□□□□ -0.33
BRPF3-209ENST00000532330 NOL8Q76FK4 1167 aaKnown RBP13.01□□□□□ -0.33
BRPF3-209ENST00000532330 SCAND2PQ9GZW5 306 aaPredicted RBP13.01□□□□□ -0.33
BRPF3-209ENST00000532330 HSPD1P10809 573 aaKnown RBP13□□□□□ -0.33
BRPF3-209ENST00000532330 FGFR2P21802 821 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 ADD2P35612 726 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 MAST3O60307 1309 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 UBN2Q6ZU65 1347 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 F13A1P00488 732 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 GJB2P29033 226 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 KRT85P78386 507 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 SART3Q15020 963 aaKnown RBP13□□□□□ -0.33
BRPF3-209ENST00000532330 CCDC102BQ68D86 513 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 TMC4Q7Z404 712 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 VPS37DQ86XT2 251 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 SPATA5Q8NB90 893 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 BCL11BQ9C0K0 894 aaPredicted RBP13□□□□□ -0.33
BRPF3-209ENST00000532330 H3BQV1 296 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 TRAPPC3LQ5T215 181 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 IFFO2Q5TF58 517 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 FAM196AQ6ZSG2 479 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 CCDC83Q8IWF9 413 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 VGLL2Q8N8G2 317 aa13□□□□□ -0.33
BRPF3-209ENST00000532330 BCORQ6W2J9 1755 aa12.99□□□□□ -0.33
BRPF3-209ENST00000532330 ONECUT3O60422 494 aaPredicted RBP12.99□□□□□ -0.33
BRPF3-209ENST00000532330 ZNF445P59923 1031 aa12.99□□□□□ -0.33
BRPF3-209ENST00000532330 SYNE3Q6ZMZ3 975 aa12.99□□□□□ -0.33
BRPF3-209ENST00000532330 NBPF5PQ86XG9 351 aaPredicted RBP12.99□□□□□ -0.33
BRPF3-209ENST00000532330 KRT23Q9C075 422 aa12.99□□□□□ -0.33
BRPF3-209ENST00000532330 COL5A3P25940 1745 aaPredicted RBP12.99□□□□□ -0.33
BRPF3-209ENST00000532330 TMTC2Q8N394 836 aa12.99□□□□□ -0.33
BRPF3-209ENST00000532330 CFAP45Q9UL16 551 aa12.99□□□□□ -0.33
BRPF3-209ENST00000532330 PFKFB2O60825 505 aa12.99□□□□□ -0.33
BRPF3-209ENST00000532330 RFC4P35249 363 aa12.99□□□□□ -0.33
BRPF3-209ENST00000532330 ZNF589Q86UQ0 364 aaPredicted RBP12.99□□□□□ -0.33
BRPF3-209ENST00000532330 TMEM87BQ96K49 555 aa12.99□□□□□ -0.33
BRPF3-209ENST00000532330 ZNF396Q96N95 335 aaPredicted RBP12.99□□□□□ -0.33
BRPF3-209ENST00000532330 GOLGA6L4A6NEF3 574 aa12.98□□□□□ -0.33
BRPF3-209ENST00000532330 ZAP70P43403 619 aa12.98□□□□□ -0.33
BRPF3-209ENST00000532330 PRPF40AO75400 957 aaKnown RBP12.98□□□□□ -0.33
BRPF3-209ENST00000532330 SLC9C2Q5TAH2 1124 aa12.98□□□□□ -0.33
BRPF3-209ENST00000532330 GTF3C6Q969F1 213 aa12.98□□□□□ -0.33
BRPF3-209ENST00000532330 LMBRD1Q9NUN5 540 aa12.98□□□□□ -0.33
BRPF3-209ENST00000532330 ARAP2Q8WZ64 1704 aa12.98□□□□□ -0.33
BRPF3-209ENST00000532330 UBE2HP62256 183 aa12.98□□□□□ -0.33
BRPF3-209ENST00000532330 NAA16Q6N069 864 aaPredicted RBP12.98□□□□□ -0.33
BRPF3-209ENST00000532330 IL25Q9H293 177 aa12.98□□□□□ -0.33
BRPF3-209ENST00000532330 SLC3A2P08195 630 aaKnown RBP12.98□□□□□ -0.33
BRPF3-209ENST00000532330 PPP2R5BQ15173 497 aa12.98□□□□□ -0.33
BRPF3-209ENST00000532330 FSD2A1L4K1 749 aa12.97□□□□□ -0.33
BRPF3-209ENST00000532330 IDH1O75874 414 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms