RNA–Protein interactions for RNA: ENST00000532257.1

GEN1-205, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 4

Gene GEN1, Length 498 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-205ENST00000532257 FAM122AQ96E09 287 aa13.5□□□□□ -0.25
GEN1-205ENST00000532257 GMLQ99445 158 aa13.5□□□□□ -0.25
GEN1-205ENST00000532257 NKX2-3Q8TAU0 364 aa13.49□□□□□ -0.25
GEN1-205ENST00000532257 PTPN18Q99952 460 aa13.49□□□□□ -0.25
GEN1-205ENST00000532257 TTC28Q96AY4 2481 aa13.49□□□□□ -0.25
GEN1-205ENST00000532257 FARP2O94887 1054 aaPredicted RBP13.48□□□□□ -0.25
GEN1-205ENST00000532257 SLC4A2P04920 1241 aa13.48□□□□□ -0.25
GEN1-205ENST00000532257 MYL6BP14649 208 aa13.48□□□□□ -0.25
GEN1-205ENST00000532257 GJA5P36382 358 aa13.48□□□□□ -0.25
GEN1-205ENST00000532257 GJA8P48165 433 aa13.48□□□□□ -0.25
GEN1-205ENST00000532257 BCAMP50895 628 aa13.48□□□□□ -0.25
GEN1-205ENST00000532257 LRIT3Q3SXY7 679 aa13.48□□□□□ -0.25
GEN1-205ENST00000532257 GDF15Q99988 308 aa13.48□□□□□ -0.25
GEN1-205ENST00000532257 ARHGAP39Q9C0H5 1083 aa13.48□□□□□ -0.25
GEN1-205ENST00000532257 PANK3Q9H999 370 aa13.48□□□□□ -0.25
GEN1-205ENST00000532257 RRP7AQ9Y3A4 280 aaKnown RBP13.48□□□□□ -0.25
GEN1-205ENST00000532257 SSC5DA1L4H1 1573 aa13.47□□□□□ -0.25
GEN1-205ENST00000532257 G3V3G9 751 aa13.47□□□□□ -0.25
GEN1-205ENST00000532257 DIAPH1O60610 1272 aaKnown RBP13.47□□□□□ -0.25
GEN1-205ENST00000532257 BMP8BP34820 402 aa13.47□□□□□ -0.25
GEN1-205ENST00000532257 DCAF8Q5TAQ9 597 aa13.47□□□□□ -0.25
GEN1-205ENST00000532257 TBC1D16Q8TBP0 767 aa13.47□□□□□ -0.25
GEN1-205ENST00000532257 CELF1Q92879 486 aaKnown RBP13.47□□□□□ -0.25
GEN1-205ENST00000532257 ZC3H12CQ9C0D7 883 aaKnown RBP13.47□□□□□ -0.25
GEN1-205ENST00000532257 OTOFQ9HC10 1997 aa13.46□□□□□ -0.25
GEN1-205ENST00000532257 WNT10BO00744 389 aa13.46□□□□□ -0.25
GEN1-205ENST00000532257 SASH1O94885 1247 aa13.46□□□□□ -0.25
GEN1-205ENST00000532257 GUCD1Q96NT3 240 aa13.46□□□□□ -0.25
GEN1-205ENST00000532257 TESPA1A2RU30 521 aaPredicted RBP13.45□□□□□ -0.26
GEN1-205ENST00000532257 GJB1P08034 283 aa13.45□□□□□ -0.26
GEN1-205ENST00000532257 MAP3K11Q16584 847 aa13.45□□□□□ -0.26
GEN1-205ENST00000532257 CCL5P13501 91 aa13.44□□□□□ -0.26
GEN1-205ENST00000532257 TAF1CQ15572 869 aaPredicted RBP13.44□□□□□ -0.26
GEN1-205ENST00000532257 MCM10Q7L590 875 aa13.44□□□□□ -0.26
GEN1-205ENST00000532257 APOBEC3FQ8IUX4 373 aaKnown RBP13.44□□□□□ -0.26
GEN1-205ENST00000532257 CDH23Q9H251 3354 aa13.43□□□□□ -0.26
GEN1-205ENST00000532257 IRS2Q9Y4H2 1338 aa13.43□□□□□ -0.26
GEN1-205ENST00000532257 COL1A1P02452 1464 aaPredicted RBP13.43□□□□□ -0.26
GEN1-205ENST00000532257 ECM2O94769 699 aaPredicted RBP13.43□□□□□ -0.26
GEN1-205ENST00000532257 UFL1O94874 794 aa13.43□□□□□ -0.26
GEN1-205ENST00000532257 TDHQ8IZJ6 230 aa13.43□□□□□ -0.26
GEN1-205ENST00000532257 RNF208Q9H0X6 261 aa13.43□□□□□ -0.26
GEN1-205ENST00000532257 ZFYVE28Q9HCC9 887 aa13.43□□□□□ -0.26
GEN1-205ENST00000532257 COL3A1P02461 1466 aaPredicted RBP13.42□□□□□ -0.26
GEN1-205ENST00000532257 USP17L3A6NCW0 530 aa13.42□□□□□ -0.26
GEN1-205ENST00000532257 USP17L4A6NCW7 530 aa13.42□□□□□ -0.26
GEN1-205ENST00000532257 U2SURPO15042 1029 aaKnown RBP13.42□□□□□ -0.26
GEN1-205ENST00000532257 LACTBP83111 547 aaPredicted RBP13.42□□□□□ -0.26
GEN1-205ENST00000532257 KIF22Q14807 665 aa13.42□□□□□ -0.26
GEN1-205ENST00000532257 USP17L1Q7RTZ2 530 aa13.42□□□□□ -0.26
GEN1-205ENST00000532257 U2AF1L4Q8WU68 220 aaKnown RBP13.42□□□□□ -0.26
GEN1-205ENST00000532257 SH3TC1Q8TE82 1336 aa13.41□□□□□ -0.26
GEN1-205ENST00000532257 PRMT2P55345 433 aa13.41□□□□□ -0.26
GEN1-205ENST00000532257 NLRP10Q86W26 655 aa13.41□□□□□ -0.26
GEN1-205ENST00000532257 PHACTR3Q96KR7 559 aa13.41□□□□□ -0.26
GEN1-205ENST00000532257 FAM161BQ96MY7 647 aa13.41□□□□□ -0.26
GEN1-205ENST00000532257 TRMT112Q9UI30 125 aaKnown RBP13.41□□□□□ -0.26
GEN1-205ENST00000532257 ZMYND8Q9ULU4 1186 aaPredicted RBP13.41□□□□□ -0.26
GEN1-205ENST00000532257 TMEM265A0A087WTH1 108 aa13.4□□□□□ -0.26
GEN1-205ENST00000532257 PPP1R12BO60237 982 aaPredicted RBP13.4□□□□□ -0.26
GEN1-205ENST00000532257 GRK4P32298 578 aa13.4□□□□□ -0.26
GEN1-205ENST00000532257 OGFOD1Q8N543 542 aa13.4□□□□□ -0.26
GEN1-205ENST00000532257 BRI3BPQ8WY22 251 aa13.4□□□□□ -0.26
GEN1-205ENST00000532257 SYMPKQ92797 1274 aaKnown RBP13.4□□□□□ -0.26
GEN1-205ENST00000532257 MS4A4AQ96JQ5 239 aa13.4□□□□□ -0.26
GEN1-205ENST00000532257 MXD3Q9BW11 206 aa13.4□□□□□ -0.26
GEN1-205ENST00000532257 MIS18AQ9NYP9 233 aa13.4□□□□□ -0.26
GEN1-205ENST00000532257 GNRH1P01148 92 aa13.39□□□□□ -0.27
GEN1-205ENST00000532257 MAGEA10P43363 369 aaPredicted RBP13.39□□□□□ -0.27
GEN1-205ENST00000532257 DCTN1Q14203 1278 aa13.39□□□□□ -0.27
GEN1-205ENST00000532257 C7orf61Q8IZ16 206 aa13.39□□□□□ -0.27
GEN1-205ENST00000532257 RTF1Q92541 710 aaKnown RBP13.39□□□□□ -0.27
GEN1-205ENST00000532257 ZNF428Q96B54 188 aa13.39□□□□□ -0.27
GEN1-205ENST00000532257 OPTNQ96CV9 577 aa13.39□□□□□ -0.27
GEN1-205ENST00000532257 PODXL2Q9NZ53 605 aa13.39□□□□□ -0.27
GEN1-205ENST00000532257 GGA1Q9UJY5 639 aa13.39□□□□□ -0.27
GEN1-205ENST00000532257 RIPOR2Q9Y4F9 1068 aa13.39□□□□□ -0.27
GEN1-205ENST00000532257 ECM29Q5VYK3 1845 aa13.39□□□□□ -0.27
GEN1-205ENST00000532257 UNCXA6NJT0 531 aa13.38□□□□□ -0.27
GEN1-205ENST00000532257 TNFRSF10AO00220 468 aa13.38□□□□□ -0.27
GEN1-205ENST00000532257 FAM43AQ8N2R8 423 aa13.38□□□□□ -0.27
GEN1-205ENST00000532257 MAFAQ8NHW3 353 aaPredicted RBP13.38□□□□□ -0.27
GEN1-205ENST00000532257 RAET1EQ8TD07 263 aa13.38□□□□□ -0.27
GEN1-205ENST00000532257 THUMPD2Q9BTF0 503 aaKnown RBP13.38□□□□□ -0.27
GEN1-205ENST00000532257 DEFB129Q9H1M3 183 aa13.38□□□□□ -0.27
GEN1-205ENST00000532257 ANKIB1Q9P2G1 1089 aa13.38□□□□□ -0.27
GEN1-205ENST00000532257 CCL15-CCL14A0A0B4J2E2 113 aa13.37□□□□□ -0.27
GEN1-205ENST00000532257 SYN1P17600 705 aa13.37□□□□□ -0.27
GEN1-205ENST00000532257 PRKAR2BP31323 418 aa13.37□□□□□ -0.27
GEN1-205ENST00000532257 IREB2P48200 963 aaKnown RBP13.37□□□□□ -0.27
GEN1-205ENST00000532257 CCL15Q16663 113 aa13.37□□□□□ -0.27
GEN1-205ENST00000532257 UNC93B1Q9H1C4 597 aa13.37□□□□□ -0.27
GEN1-205ENST00000532257 ELP3Q9H9T3 547 aa13.37□□□□□ -0.27
GEN1-205ENST00000532257 BIN2Q9UBW5 565 aaPredicted RBP13.37□□□□□ -0.27
GEN1-205ENST00000532257 SRRDQ9UH36 339 aa13.37□□□□□ -0.27
GEN1-205ENST00000532257 KNSTRNQ9Y448 316 aa13.37□□□□□ -0.27
GEN1-205ENST00000532257 POTEB2H3BUK9 544 aa13.36□□□□□ -0.27
GEN1-205ENST00000532257 TLR2O60603 784 aa13.36□□□□□ -0.27
GEN1-205ENST00000532257 SGPL1O95470 568 aa13.36□□□□□ -0.27
GEN1-205ENST00000532257 CTGFP29279 349 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms