RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 TRMT112Q9UI30 125 aaKnown RBP7.36□□□□□ -1.23
HMGB1P42-201ENST00000532126 KIF13BQ9NQT8 1826 aa7.36□□□□□ -1.23
HMGB1P42-201ENST00000532126 ABCC12Q96J65 1359 aa7.35□□□□□ -1.23
HMGB1P42-201ENST00000532126 RNF123Q5XPI4 1314 aa7.35□□□□□ -1.23
HMGB1P42-201ENST00000532126 KLRG2A4D1S0 409 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P42-201ENST00000532126 CARNS1A5YM72 827 aa7.35□□□□□ -1.23
HMGB1P42-201ENST00000532126 PALM3A6NDB9 673 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P42-201ENST00000532126 NPR1P16066 1061 aa7.35□□□□□ -1.23
HMGB1P42-201ENST00000532126 KSR2Q6VAB6 950 aa7.35□□□□□ -1.23
HMGB1P42-201ENST00000532126 CDCA7LQ96GN5 454 aa7.35□□□□□ -1.23
HMGB1P42-201ENST00000532126 MYD88Q99836 296 aa7.35□□□□□ -1.23
HMGB1P42-201ENST00000532126 ISCA1Q9BUE6 129 aa7.35□□□□□ -1.23
HMGB1P42-201ENST00000532126 BCL11AQ9H165 835 aa7.35□□□□□ -1.23
HMGB1P42-201ENST00000532126 MAP3K2Q9Y2U5 619 aa7.35□□□□□ -1.23
HMGB1P42-201ENST00000532126 PCDHGA4Q9Y5G9 962 aa7.35□□□□□ -1.23
HMGB1P42-201ENST00000532126 SH3TC1Q8TE82 1336 aa7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 PI4KAP2A4QPH2 592 aa7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 HNRNPUQ00839 825 aaKnown RBP eCLIP7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 NEXNQ0ZGT2 675 aa7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 TRIM28Q13263 835 aaKnown RBP7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 FKBP5Q13451 457 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 CRY2Q49AN0 593 aa7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 SLC10A5Q5PT55 438 aa7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 C6orf132Q5T0Z8 1188 aa7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 PRPF40BQ6NWY9 871 aaKnown RBP7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 G2E3Q7L622 706 aa7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 ANKRD13AQ8IZ07 590 aa7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 PI4KAP1Q8N8J0 262 aa7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 RBM46Q8TBY0 533 aaKnown RBP7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 RPGRQ92834 1020 aaKnown RBP7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 NLRP3Q96P20 1036 aa7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 METTL22Q9BUU2 404 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 BCL2L13Q9BXK5 485 aa7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 LIMD1Q9UGP4 676 aa7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 KIAA1551Q9HCM1 1747 aa7.34□□□□□ -1.23
HMGB1P42-201ENST00000532126 AFDNP55196 1824 aaKnown RBP7.34□□□□□ -1.24
HMGB1P42-201ENST00000532126 N4BP2Q86UW6 1770 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 C21orf2O43822 256 aa7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 AP1G2O75843 785 aa7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 HCLS1P14317 486 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 ZNF16P17020 682 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 ALDH1B1P30837 517 aa7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 SOX11P35716 441 aa7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 SF3A1Q15459 793 aaKnown RBP7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 RTL5Q5HYW3 569 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 SOGA3Q5TF21 947 aa7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 ZNF710Q8N1W2 664 aa7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 CCDC191Q8NCU4 936 aa7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 ADAMTS19Q8TE59 1207 aa7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 SLC39A7Q92504 469 aa7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 UBXN4Q92575 508 aa7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 FAM89AQ96GI7 184 aa7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 RBM17Q96I25 401 aaKnown RBP7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 CWC25Q9NXE8 425 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 RBM27Q9P2N5 1060 aaKnown RBP7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 RIC1Q4ADV7 1423 aa7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 ADCY9O60503 1353 aa7.33□□□□□ -1.24
HMGB1P42-201ENST00000532126 HOXA10P31260 410 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P42-201ENST00000532126 FOSBP53539 338 aa7.32□□□□□ -1.24
HMGB1P42-201ENST00000532126 TRMT2AQ8IZ69 625 aaKnown RBP7.32□□□□□ -1.24
HMGB1P42-201ENST00000532126 SYNE4Q8N205 404 aa7.32□□□□□ -1.24
HMGB1P42-201ENST00000532126 ZBTB38Q8NAP3 1195 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P42-201ENST00000532126 TTC13Q8NBP0 860 aa7.32□□□□□ -1.24
HMGB1P42-201ENST00000532126 DNAAF4Q8WXU2 420 aa7.32□□□□□ -1.24
HMGB1P42-201ENST00000532126 DCBLD2Q96PD2 775 aa7.32□□□□□ -1.24
HMGB1P42-201ENST00000532126 NUP98P52948 1817 aa7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 IRS4O14654 1257 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 SPTLC1O15269 473 aa7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 SMARCA5O60264 1052 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 PCCAP05165 728 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 IGKV5-2P06315 115 aa7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 USP17L8P0C7I0 530 aa7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 GJA5P36382 358 aa7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 CWF19L2Q2TBE0 894 aaKnown RBP7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 CCDC93Q567U6 631 aa7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 DNAJC14Q6Y2X3 702 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 DDX46Q7L014 1031 aaKnown RBP7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 LINS1Q8NG48 757 aa7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 C7orf43Q8WVR3 580 aa7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 SSH1Q8WYL5 1049 aa7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 ZDHHC16Q969W1 377 aa7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 CRAMP1Q96RY5 1269 aa7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 TMX4Q9H1E5 349 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P42-201ENST00000532126 ANKRD31Q8N7Z5 1873 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 NEURL1BA8MQ27 555 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 F6X3S4 739 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 NFKBIEO00221 500 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 PPEF1O14829 653 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 CT47B1P0C2W7 299 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 C7P10643 843 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 LMNB1P20700 586 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 VAMP1P23763 118 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 ARID4AP29374 1257 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 PRSS12P56730 875 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 RASSF7Q02833 373 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 ALDH1L2Q3SY69 923 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 C9orf131Q5VYM1 1079 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 CC2D2BQ6DHV5 1058 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 SLC4A10Q6U841 1118 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 RTKN2Q8IZC4 609 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms