RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PNMA6EA0A0J9YXQ4 647 aa15.55■□□□□ 0.08
COPB1-208ENST00000532088 CNKSR1Q969H4 720 aa15.55■□□□□ 0.08
COPB1-208ENST00000532088 COPRSQ9NQ92 184 aa15.55■□□□□ 0.08
COPB1-208ENST00000532088 EMILIN3Q9NT22 766 aa15.55■□□□□ 0.08
COPB1-208ENST00000532088 CHMP3Q9Y3E7 222 aa15.55■□□□□ 0.08
COPB1-208ENST00000532088 BBOX1O75936 387 aa15.54■□□□□ 0.08
COPB1-208ENST00000532088 SIRT2Q8IXJ6 389 aa15.54■□□□□ 0.08
COPB1-208ENST00000532088 PPP1R1BQ9UD71 204 aaPredicted RBP15.54■□□□□ 0.08
COPB1-208ENST00000532088 NOP58Q9Y2X3 529 aaKnown RBP15.54■□□□□ 0.08
COPB1-208ENST00000532088 CIAO1O76071 339 aa15.53■□□□□ 0.08
COPB1-208ENST00000532088 IGHMBP2P38935 993 aaKnown RBP15.53■□□□□ 0.08
COPB1-208ENST00000532088 RPS8P62241 208 aaKnown RBP15.53■□□□□ 0.08
COPB1-208ENST00000532088 PTPN12Q05209 780 aaKnown RBP15.53■□□□□ 0.08
COPB1-208ENST00000532088 ANKRD18AQ8IVF6 992 aa15.53■□□□□ 0.08
COPB1-208ENST00000532088 BSDC1Q9NW68 430 aaPredicted RBP15.53■□□□□ 0.08
COPB1-208ENST00000532088 SLC34A2O95436 690 aa15.52■□□□□ 0.08
COPB1-208ENST00000532088 DPEP1P16444 411 aa15.52■□□□□ 0.08
COPB1-208ENST00000532088 KCNA3P22001 575 aa15.52■□□□□ 0.08
COPB1-208ENST00000532088 HSP90AB4PQ58FF6 505 aa15.52■□□□□ 0.08
COPB1-208ENST00000532088 TAF7LQ5H9L4 462 aa15.52■□□□□ 0.08
COPB1-208ENST00000532088 RWDD1Q9H446 243 aaPredicted RBP15.52■□□□□ 0.08
COPB1-208ENST00000532088 SEC31BQ9NQW1 1179 aa15.52■□□□□ 0.08
COPB1-208ENST00000532088 BRCA1P38398 1863 aaKnown RBP15.51■□□□□ 0.07
COPB1-208ENST00000532088 CHRNA5P30532 468 aa15.51■□□□□ 0.07
COPB1-208ENST00000532088 TTLL6Q8N841 843 aa15.51■□□□□ 0.07
COPB1-208ENST00000532088 CELF1Q92879 486 aaKnown RBP15.51■□□□□ 0.07
COPB1-208ENST00000532088 ZNF622Q969S3 477 aaKnown RBP eCLIP15.51■□□□□ 0.07
COPB1-208ENST00000532088 CCDC85AQ96PX6 553 aaPredicted RBP15.51■□□□□ 0.07
COPB1-208ENST00000532088 FHDC1Q9C0D6 1143 aaPredicted RBP15.51■□□□□ 0.07
COPB1-208ENST00000532088 PIM2Q9P1W9 311 aa15.51■□□□□ 0.07
COPB1-208ENST00000532088 EYA2O00167 538 aa15.5■□□□□ 0.07
COPB1-208ENST00000532088 GRIPAP1Q4V328 841 aa15.5■□□□□ 0.07
COPB1-208ENST00000532088 CC2D2BQ6DHV5 1058 aa15.5■□□□□ 0.07
COPB1-208ENST00000532088 ERC1Q8IUD2 1116 aa15.5■□□□□ 0.07
COPB1-208ENST00000532088 GCC1Q96CN9 775 aa15.5■□□□□ 0.07
COPB1-208ENST00000532088 MPHOSPH8Q99549 860 aa15.5■□□□□ 0.07
COPB1-208ENST00000532088 DCTPP1Q9H773 170 aa15.5■□□□□ 0.07
COPB1-208ENST00000532088 LRRC37AA6NMS7 1700 aa15.49■□□□□ 0.07
COPB1-208ENST00000532088 A0A0G2JLW4 131 aa15.49■□□□□ 0.07
COPB1-208ENST00000532088 RAB11FIP3O75154 756 aa15.49■□□□□ 0.07
COPB1-208ENST00000532088 IL15P40933 162 aaPredicted RBP15.49■□□□□ 0.07
COPB1-208ENST00000532088 LDHAL6AQ6ZMR3 332 aa15.49■□□□□ 0.07
COPB1-208ENST00000532088 SP8Q8IXZ3 490 aa15.49■□□□□ 0.07
COPB1-208ENST00000532088 SYT17Q9BSW7 474 aa15.49■□□□□ 0.07
COPB1-208ENST00000532088 PPP4R2Q9NY27 417 aa15.49■□□□□ 0.07
COPB1-208ENST00000532088 ATP6V0A2Q9Y487 856 aa15.49■□□□□ 0.07
COPB1-208ENST00000532088 RIPOR2Q9Y4F9 1068 aa15.49■□□□□ 0.07
COPB1-208ENST00000532088 MROH5Q6ZUA9 1318 aa15.48■□□□□ 0.07
COPB1-208ENST00000532088 PPEF1O14829 653 aaPredicted RBP15.48■□□□□ 0.07
COPB1-208ENST00000532088 G3BP1Q13283 466 aaKnown RBP eCLIP15.48■□□□□ 0.07
COPB1-208ENST00000532088 SOGA3Q5TF21 947 aa15.48■□□□□ 0.07
COPB1-208ENST00000532088 PRPF40BQ6NWY9 871 aaKnown RBP15.48■□□□□ 0.07
COPB1-208ENST00000532088 OXER1Q8TDS5 423 aa15.48■□□□□ 0.07
COPB1-208ENST00000532088 PTCD2Q8WV60 388 aaKnown RBP15.48■□□□□ 0.07
COPB1-208ENST00000532088 COL4A1P02462 1669 aa15.48■□□□□ 0.07
COPB1-208ENST00000532088 SURF6O75683 361 aaKnown RBP15.47■□□□□ 0.07
COPB1-208ENST00000532088 DALRD3Q5D0E6 543 aaKnown RBP15.47■□□□□ 0.07
COPB1-208ENST00000532088 ATG9AQ7Z3C6 839 aa15.47■□□□□ 0.07
COPB1-208ENST00000532088 SMC5Q8IY18 1101 aa15.47■□□□□ 0.07
COPB1-208ENST00000532088 C7orf43Q8WVR3 580 aa15.47■□□□□ 0.07
COPB1-208ENST00000532088 ZNF594Q96JF6 807 aaPredicted RBP15.47■□□□□ 0.07
COPB1-208ENST00000532088 ANKRD2Q9GZV1 360 aa15.47■□□□□ 0.07
COPB1-208ENST00000532088 TMX4Q9H1E5 349 aaPredicted RBP15.47■□□□□ 0.07
COPB1-208ENST00000532088 CNNM1Q9NRU3 951 aa15.47■□□□□ 0.07
COPB1-208ENST00000532088 PA2G4Q9UQ80 394 aaKnown RBP15.47■□□□□ 0.07
COPB1-208ENST00000532088 NLGN2Q8NFZ4 835 aa15.46■□□□□ 0.07
COPB1-208ENST00000532088 KLHDC4Q8TBB5 520 aa15.46■□□□□ 0.07
COPB1-208ENST00000532088 GPR108Q9NPR9 543 aa15.46■□□□□ 0.07
COPB1-208ENST00000532088 PODXL2Q9NZ53 605 aa15.46■□□□□ 0.07
COPB1-208ENST00000532088 MINPP1Q9UNW1 487 aa15.46■□□□□ 0.07
COPB1-208ENST00000532088 SLX4Q8IY92 1834 aa15.45■□□□□ 0.06
COPB1-208ENST00000532088 HOXB3P14651 431 aaPredicted RBP15.45■□□□□ 0.06
COPB1-208ENST00000532088 LRRC24Q50LG9 513 aa15.45■□□□□ 0.06
COPB1-208ENST00000532088 KIF1BPQ96EK5 621 aa15.45■□□□□ 0.06
COPB1-208ENST00000532088 PUS3Q9BZE2 481 aaKnown RBP15.45■□□□□ 0.06
COPB1-208ENST00000532088 TAF1P21675 1872 aa15.45■□□□□ 0.06
COPB1-208ENST00000532088 ARFGEF1Q9Y6D6 1849 aa15.45■□□□□ 0.06
COPB1-208ENST00000532088 SNED1Q8TER0 1413 aa15.44■□□□□ 0.06
COPB1-208ENST00000532088 IGHDP01880 384 aa15.44■□□□□ 0.06
COPB1-208ENST00000532088 CHRNDQ07001 517 aa15.44■□□□□ 0.06
COPB1-208ENST00000532088 CENPQQ7L2Z9 268 aaPredicted RBP15.44■□□□□ 0.06
COPB1-208ENST00000532088 VGLL2Q8N8G2 317 aa15.44■□□□□ 0.06
COPB1-208ENST00000532088 CCDC136Q96JN2 1154 aa15.44■□□□□ 0.06
COPB1-208ENST00000532088 SIL1Q9H173 461 aa15.44■□□□□ 0.06
COPB1-208ENST00000532088 CEP126Q9P2H0 1117 aa15.44■□□□□ 0.06
COPB1-208ENST00000532088 SPEF2Q9C093 1822 aa15.44■□□□□ 0.06
COPB1-208ENST00000532088 XDHP47989 1333 aa15.43■□□□□ 0.06
COPB1-208ENST00000532088 KDM2BQ8NHM5 1336 aa15.43■□□□□ 0.06
COPB1-208ENST00000532088 PDE8BO95263 885 aa15.43■□□□□ 0.06
COPB1-208ENST00000532088 OS9Q13438 667 aaPredicted RBP15.43■□□□□ 0.06
COPB1-208ENST00000532088 CCDC93Q567U6 631 aa15.43■□□□□ 0.06
COPB1-208ENST00000532088 METTL24Q5JXM2 366 aa15.43■□□□□ 0.06
COPB1-208ENST00000532088 RTKN2Q8IZC4 609 aa15.43■□□□□ 0.06
COPB1-208ENST00000532088 RHPN1Q8TCX5 695 aa15.43■□□□□ 0.06
COPB1-208ENST00000532088 EXOC6BQ9Y2D4 811 aa15.43■□□□□ 0.06
COPB1-208ENST00000532088 AKAP2Q9Y2D5 859 aa15.43■□□□□ 0.06
COPB1-208ENST00000532088 LEMD3Q9Y2U8 911 aa15.43■□□□□ 0.06
COPB1-208ENST00000532088 A0A1B0GUL6 1792 aa15.43■□□□□ 0.06
COPB1-208ENST00000532088 LTBP1Q14766 1721 aa15.43■□□□□ 0.06
COPB1-208ENST00000532088 CACNA1SQ13698 1873 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms