RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 MROH5Q6ZUA9 1318 aa13.54□□□□□ -0.24
GPATCH4-216ENST00000531900 ZNF646O15015 1829 aaPredicted RBP13.53□□□□□ -0.24
GPATCH4-216ENST00000531900 RAD17O75943 681 aa13.53□□□□□ -0.24
GPATCH4-216ENST00000531900 HSPA1AP0DMV8 641 aaKnown RBP13.53□□□□□ -0.24
GPATCH4-216ENST00000531900 HSPA1BP0DMV9 641 aaKnown RBP13.53□□□□□ -0.24
GPATCH4-216ENST00000531900 GMPSP49915 693 aaPredicted RBP13.53□□□□□ -0.24
GPATCH4-216ENST00000531900 PTPN12Q05209 780 aaKnown RBP13.53□□□□□ -0.24
GPATCH4-216ENST00000531900 DOK7Q18PE1 504 aa13.53□□□□□ -0.24
GPATCH4-216ENST00000531900 TXNRD3Q86VQ6 643 aa13.53□□□□□ -0.24
GPATCH4-216ENST00000531900 DZIP1LQ8IYY4 767 aaKnown RBP13.53□□□□□ -0.24
GPATCH4-216ENST00000531900 TMEM57Q8N5G2 664 aa13.53□□□□□ -0.24
GPATCH4-216ENST00000531900 PUS3Q9BZE2 481 aaKnown RBP13.53□□□□□ -0.24
GPATCH4-216ENST00000531900 CNNM1Q9NRU3 951 aa13.53□□□□□ -0.24
GPATCH4-216ENST00000531900 LRRFIP2Q9Y608 721 aaKnown RBP13.53□□□□□ -0.24
GPATCH4-216ENST00000531900 CNTNAP1P78357 1384 aa13.53□□□□□ -0.24
GPATCH4-216ENST00000531900 PCNTO95613 3336 aa13.52□□□□□ -0.24
GPATCH4-216ENST00000531900 PSMD14O00487 310 aa13.52□□□□□ -0.25
GPATCH4-216ENST00000531900 TAF5LO75529 589 aa13.52□□□□□ -0.25
GPATCH4-216ENST00000531900 MS4A1P11836 297 aa13.52□□□□□ -0.25
GPATCH4-216ENST00000531900 VGLL2Q8N8G2 317 aa13.52□□□□□ -0.25
GPATCH4-216ENST00000531900 CLUAP1Q96AJ1 413 aa13.52□□□□□ -0.25
GPATCH4-216ENST00000531900 COPRSQ9NQ92 184 aa13.52□□□□□ -0.25
GPATCH4-216ENST00000531900 KCNQ5Q9NR82 932 aa13.52□□□□□ -0.25
GPATCH4-216ENST00000531900 RCAN3Q9UKA8 241 aa13.52□□□□□ -0.25
GPATCH4-216ENST00000531900 G3V3G9 751 aa13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 H7C1D1 291 aa13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 EYA2O00167 538 aa13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 ZBTB7BO15156 539 aaPredicted RBP13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 CIAO1O76071 339 aa13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 PDE8BO95263 885 aa13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 GNAI2P04899 355 aa13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 RLBP1P12271 317 aa13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 MMP14P50281 582 aa13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 DEFB115Q30KQ5 88 aa13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 DCAF8Q5TAQ9 597 aa13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 STRIP1Q5VSL9 837 aa13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 AGBL3Q8NEM8 1001 aa13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 HELBQ8NG08 1087 aaPredicted RBP13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 GMLQ99445 158 aa13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 PGAP2Q9UHJ9 254 aa13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 CNOT7Q9UIV1 285 aaKnown RBP13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 ABT1Q9ULW3 272 aaKnown RBP13.51□□□□□ -0.25
GPATCH4-216ENST00000531900 USP17L3A6NCW0 530 aa13.5□□□□□ -0.25
GPATCH4-216ENST00000531900 USP17L4A6NCW7 530 aa13.5□□□□□ -0.25
GPATCH4-216ENST00000531900 ZBTB22O15209 634 aa13.5□□□□□ -0.25
GPATCH4-216ENST00000531900 IL1R1P14778 569 aa13.5□□□□□ -0.25
GPATCH4-216ENST00000531900 VEGFBP49765 207 aa13.5□□□□□ -0.25
GPATCH4-216ENST00000531900 LRRC24Q50LG9 513 aa13.5□□□□□ -0.25
GPATCH4-216ENST00000531900 USP17L1Q7RTZ2 530 aa13.5□□□□□ -0.25
GPATCH4-216ENST00000531900 ATG9AQ7Z3C6 839 aa13.5□□□□□ -0.25
GPATCH4-216ENST00000531900 FTSJ3Q8IY81 847 aaKnown RBP13.5□□□□□ -0.25
GPATCH4-216ENST00000531900 ZC3H15Q8WU90 426 aaKnown RBP13.5□□□□□ -0.25
GPATCH4-216ENST00000531900 CD209Q9NNX6 404 aa13.5□□□□□ -0.25
GPATCH4-216ENST00000531900 RASSF10A6NK89 507 aa13.49□□□□□ -0.25
GPATCH4-216ENST00000531900 SNAP23O00161 211 aa13.49□□□□□ -0.25
GPATCH4-216ENST00000531900 KLRK1P26718 216 aa13.49□□□□□ -0.25
GPATCH4-216ENST00000531900 KCNJ4P48050 445 aa13.49□□□□□ -0.25
GPATCH4-216ENST00000531900 DACT2Q5SW24 774 aa13.49□□□□□ -0.25
GPATCH4-216ENST00000531900 COL13A1Q5TAT6 717 aaPredicted RBP13.49□□□□□ -0.25
GPATCH4-216ENST00000531900 RSBN1LQ6PCB5 846 aaPredicted RBP13.49□□□□□ -0.25
GPATCH4-216ENST00000531900 KLHDC4Q8TBB5 520 aa13.49□□□□□ -0.25
GPATCH4-216ENST00000531900 MYO3BQ8WXR4 1341 aa13.48□□□□□ -0.25
GPATCH4-216ENST00000531900 FGFR2P21802 821 aa13.48□□□□□ -0.25
GPATCH4-216ENST00000531900 IL15P40933 162 aaPredicted RBP13.48□□□□□ -0.25
GPATCH4-216ENST00000531900 ZNF280AP59817 542 aaPredicted RBP13.48□□□□□ -0.25
GPATCH4-216ENST00000531900 FKBP1AP62942 108 aaKnown RBP13.48□□□□□ -0.25
GPATCH4-216ENST00000531900 MICALL2Q8IY33 904 aa13.48□□□□□ -0.25
GPATCH4-216ENST00000531900 AIDAQ96BJ3 306 aa13.48□□□□□ -0.25
GPATCH4-216ENST00000531900 FAM84BQ96KN1 310 aaPredicted RBP13.48□□□□□ -0.25
GPATCH4-216ENST00000531900 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
GPATCH4-216ENST00000531900 POLR2AP24928 1970 aaKnown RBP13.47□□□□□ -0.25
GPATCH4-216ENST00000531900 TRAF5O00463 557 aa13.47□□□□□ -0.25
GPATCH4-216ENST00000531900 SRGAP3O43295 1099 aa13.47□□□□□ -0.25
GPATCH4-216ENST00000531900 SASH1O94885 1247 aa13.47□□□□□ -0.25
GPATCH4-216ENST00000531900 PDE3AQ14432 1141 aa13.47□□□□□ -0.25
GPATCH4-216ENST00000531900 METTL24Q5JXM2 366 aa13.47□□□□□ -0.25
GPATCH4-216ENST00000531900 CDC37L1Q7L3B6 337 aa13.47□□□□□ -0.25
GPATCH4-216ENST00000531900 ZNF804AQ7Z570 1209 aa13.47□□□□□ -0.25
GPATCH4-216ENST00000531900 FBXO33Q7Z6M2 555 aa13.47□□□□□ -0.25
GPATCH4-216ENST00000531900 TDRD7Q8NHU6 1098 aaKnown RBP13.47□□□□□ -0.25
GPATCH4-216ENST00000531900 FAM205AQ6ZU69 1335 aa13.46□□□□□ -0.25
GPATCH4-216ENST00000531900 PLIN1O60240 522 aa13.46□□□□□ -0.25
GPATCH4-216ENST00000531900 ECE1P42892 770 aa13.46□□□□□ -0.25
GPATCH4-216ENST00000531900 HIRAP54198 1017 aaPredicted RBP13.46□□□□□ -0.25
GPATCH4-216ENST00000531900 ATP8B2P98198 1209 aa13.46□□□□□ -0.25
GPATCH4-216ENST00000531900 POLA2Q14181 598 aa13.46□□□□□ -0.25
GPATCH4-216ENST00000531900 PUM3Q15397 648 aaKnown RBP13.46□□□□□ -0.25
GPATCH4-216ENST00000531900 TTLL5Q6EMB2 1281 aa13.46□□□□□ -0.25
GPATCH4-216ENST00000531900 PAXIP1Q6ZW49 1069 aaPredicted RBP13.46□□□□□ -0.25
GPATCH4-216ENST00000531900 TNS4Q8IZW8 715 aa13.46□□□□□ -0.25
GPATCH4-216ENST00000531900 TRPM4Q8TD43 1214 aa13.46□□□□□ -0.25
GPATCH4-216ENST00000531900 SSH3Q8TE77 659 aa13.46□□□□□ -0.25
GPATCH4-216ENST00000531900 WDR33Q9C0J8 1336 aaKnown RBP13.45□□□□□ -0.26
GPATCH4-216ENST00000531900 CELF2O95319 508 aaKnown RBP13.45□□□□□ -0.26
GPATCH4-216ENST00000531900 USP17L8P0C7I0 530 aa13.45□□□□□ -0.26
GPATCH4-216ENST00000531900 HIBADHP31937 336 aaKnown RBP13.45□□□□□ -0.26
GPATCH4-216ENST00000531900 MAP2K1Q02750 393 aaPredicted RBP13.45□□□□□ -0.26
GPATCH4-216ENST00000531900 FMR1Q06787 632 aaKnown RBP eCLIP13.45□□□□□ -0.26
GPATCH4-216ENST00000531900 CST9Q5W186 159 aa13.45□□□□□ -0.26
GPATCH4-216ENST00000531900 ITPRIPQ8IWB1 547 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms