RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 IGHMBP2P38935 993 aaKnown RBP16.37■□□□□ 0.21
TM9SF1-211ENST00000531406 ZNF157P51786 506 aaPredicted RBP16.37■□□□□ 0.21
TM9SF1-211ENST00000531406 FKBP5Q13451 457 aaPredicted RBP16.37■□□□□ 0.21
TM9SF1-211ENST00000531406 WDR63Q8IWG1 891 aa16.37■□□□□ 0.21
TM9SF1-211ENST00000531406 LINS1Q8NG48 757 aa16.37■□□□□ 0.21
TM9SF1-211ENST00000531406 DNAAF4Q8WXU2 420 aa16.37■□□□□ 0.21
TM9SF1-211ENST00000531406 MYH16Q9H6N6 1097 aa16.37■□□□□ 0.21
TM9SF1-211ENST00000531406 LEMD3Q9Y2U8 911 aa16.37■□□□□ 0.21
TM9SF1-211ENST00000531406 SALL2Q9Y467 1007 aaPredicted RBP16.37■□□□□ 0.21
TM9SF1-211ENST00000531406 VAMP4O75379 141 aa16.36■□□□□ 0.21
TM9SF1-211ENST00000531406 CSF1RP07333 972 aa16.36■□□□□ 0.21
TM9SF1-211ENST00000531406 ITGA6P23229 1130 aa16.36■□□□□ 0.21
TM9SF1-211ENST00000531406 KIF23Q02241 960 aaPredicted RBP16.36■□□□□ 0.21
TM9SF1-211ENST00000531406 DACT2Q5SW24 774 aa16.36■□□□□ 0.21
TM9SF1-211ENST00000531406 TXNRD3Q86VQ6 643 aa16.36■□□□□ 0.21
TM9SF1-211ENST00000531406 MXD3Q9BW11 206 aa16.36■□□□□ 0.21
TM9SF1-211ENST00000531406 COA1Q9GZY4 146 aa16.36■□□□□ 0.21
TM9SF1-211ENST00000531406 SCN9AQ15858 1988 aa16.35■□□□□ 0.21
TM9SF1-211ENST00000531406 EXOSC9Q06265 439 aaKnown RBP16.35■□□□□ 0.21
TM9SF1-211ENST00000531406 FAM161AQ3B820 660 aa16.35■□□□□ 0.21
TM9SF1-211ENST00000531406 STRIP1Q5VSL9 837 aa16.35■□□□□ 0.21
TM9SF1-211ENST00000531406 ANKRD2Q9GZV1 360 aa16.35■□□□□ 0.21
TM9SF1-211ENST00000531406 PITPNM2Q9BZ72 1349 aa16.35■□□□□ 0.21
TM9SF1-211ENST00000531406 ANP32CO43423 234 aa16.34■□□□□ 0.21
TM9SF1-211ENST00000531406 FBXW7Q969H0 707 aa16.34■□□□□ 0.21
TM9SF1-211ENST00000531406 MPHOSPH8Q99549 860 aa16.34■□□□□ 0.21
TM9SF1-211ENST00000531406 ZNF804BA4D1E1 1349 aa16.34■□□□□ 0.21
TM9SF1-211ENST00000531406 CCDC85CA6NKD9 419 aa16.33■□□□□ 0.2
TM9SF1-211ENST00000531406 SLC10A3P09131 477 aa16.33■□□□□ 0.2
TM9SF1-211ENST00000531406 KLRK1P26718 216 aa16.33■□□□□ 0.2
TM9SF1-211ENST00000531406 FKBP1BP68106 108 aa16.33■□□□□ 0.2
TM9SF1-211ENST00000531406 NBPF9Q3BBW0 867 aa16.33■□□□□ 0.2
TM9SF1-211ENST00000531406 OGFOD1Q8N543 542 aa16.33■□□□□ 0.2
TM9SF1-211ENST00000531406 MCOLN1Q9GZU1 580 aa16.33■□□□□ 0.2
TM9SF1-211ENST00000531406 MYO3BQ8WXR4 1341 aa16.33■□□□□ 0.2
TM9SF1-211ENST00000531406 SAGE1Q9NXZ1 904 aa16.32■□□□□ 0.2
TM9SF1-211ENST00000531406 SCAF8Q9UPN6 1271 aaKnown RBP16.32■□□□□ 0.2
TM9SF1-211ENST00000531406 ANKRD18BA2A2Z9 1011 aa16.31■□□□□ 0.2
TM9SF1-211ENST00000531406 F6X3S4 739 aa16.31■□□□□ 0.2
TM9SF1-211ENST00000531406 MMP14P50281 582 aa16.31■□□□□ 0.2
TM9SF1-211ENST00000531406 FOXO4P98177 505 aa16.31■□□□□ 0.2
TM9SF1-211ENST00000531406 CHRNDQ07001 517 aa16.31■□□□□ 0.2
TM9SF1-211ENST00000531406 BEND3Q5T5X7 828 aa16.31■□□□□ 0.2
TM9SF1-211ENST00000531406 DIEXFQ68CQ4 756 aaKnown RBP16.31■□□□□ 0.2
TM9SF1-211ENST00000531406 TTLL5Q6EMB2 1281 aa16.31■□□□□ 0.2
TM9SF1-211ENST00000531406 CSRNP1Q96S65 589 aa16.31■□□□□ 0.2
TM9SF1-211ENST00000531406 SPINK5Q9NQ38 1064 aaPredicted RBP16.31■□□□□ 0.2
TM9SF1-211ENST00000531406 RNF186Q9NXI6 227 aa16.31■□□□□ 0.2
TM9SF1-211ENST00000531406 WNT10BO00744 389 aa16.3■□□□□ 0.2
TM9SF1-211ENST00000531406 TRPA1O75762 1119 aa16.3■□□□□ 0.2
TM9SF1-211ENST00000531406 KCNJ4P48050 445 aa16.3■□□□□ 0.2
TM9SF1-211ENST00000531406 DGKZQ13574 1117 aa16.3■□□□□ 0.2
TM9SF1-211ENST00000531406 PRAMEF18Q5VWM3 479 aa16.3■□□□□ 0.2
TM9SF1-211ENST00000531406 RASAL3Q86YV0 1011 aa16.3■□□□□ 0.2
TM9SF1-211ENST00000531406 UBE2Q2LH0YL09 131 aa16.29■□□□□ 0.2
TM9SF1-211ENST00000531406 GTF2IP78347 998 aa16.29■□□□□ 0.2
TM9SF1-211ENST00000531406 IFIT5Q13325 482 aaKnown RBP16.29■□□□□ 0.2
TM9SF1-211ENST00000531406 MOB2Q70IA6 237 aa16.29■□□□□ 0.2
TM9SF1-211ENST00000531406 SNAP23O00161 211 aa16.28■□□□□ 0.2
TM9SF1-211ENST00000531406 TAF5LO75529 589 aa16.28■□□□□ 0.2
TM9SF1-211ENST00000531406 SASH1O94885 1247 aa16.28■□□□□ 0.2
TM9SF1-211ENST00000531406 KIAA0825Q8IV33 1275 aa16.28■□□□□ 0.2
TM9SF1-211ENST00000531406 REM2Q8IYK8 340 aaPredicted RBP16.28■□□□□ 0.2
TM9SF1-211ENST00000531406 HELBQ8NG08 1087 aaPredicted RBP16.28■□□□□ 0.2
TM9SF1-211ENST00000531406 CD209Q9NNX6 404 aa16.28■□□□□ 0.2
TM9SF1-211ENST00000531406 IRS2Q9Y4H2 1338 aa16.27■□□□□ 0.2
TM9SF1-211ENST00000531406 EPHA10Q5JZY3 1008 aa16.27■□□□□ 0.2
TM9SF1-211ENST00000531406 LMBR1LQ6UX01 489 aa16.27■□□□□ 0.2
TM9SF1-211ENST00000531406 C15orf52Q6ZUT6 534 aaKnown RBP16.27■□□□□ 0.2
TM9SF1-211ENST00000531406 ZBED3Q96IU2 234 aaPredicted RBP16.27■□□□□ 0.2
TM9SF1-211ENST00000531406 HDAC9Q9UKV0 1011 aa16.27■□□□□ 0.2
TM9SF1-211ENST00000531406 CHMP3Q9Y3E7 222 aa16.27■□□□□ 0.2
TM9SF1-211ENST00000531406 GRM8O00222 908 aa16.26■□□□□ 0.19
TM9SF1-211ENST00000531406 RGS19P49795 217 aa16.26■□□□□ 0.19
TM9SF1-211ENST00000531406 TTLL12Q14166 644 aaPredicted RBP16.26■□□□□ 0.19
TM9SF1-211ENST00000531406 FAM9BQ8IZU0 186 aa16.26■□□□□ 0.19
TM9SF1-211ENST00000531406 PSME4Q14997 1843 aa16.26■□□□□ 0.19
TM9SF1-211ENST00000531406 NF2P35240 595 aa16.25■□□□□ 0.19
TM9SF1-211ENST00000531406 APOBEC3FQ8IUX4 373 aaKnown RBP16.25■□□□□ 0.19
TM9SF1-211ENST00000531406 CERS5Q8N5B7 392 aa16.25■□□□□ 0.19
TM9SF1-211ENST00000531406 PAPPA2Q9BXP8 1791 aa16.25■□□□□ 0.19
TM9SF1-211ENST00000531406 POLR2AP24928 1970 aaKnown RBP16.24■□□□□ 0.19
TM9SF1-211ENST00000531406 DLGAP5Q15398 846 aa16.24■□□□□ 0.19
TM9SF1-211ENST00000531406 CCDC57Q2TAC2 916 aa16.24■□□□□ 0.19
TM9SF1-211ENST00000531406 LDHAL6AQ6ZMR3 332 aa16.24■□□□□ 0.19
TM9SF1-211ENST00000531406 ZNF804AQ7Z570 1209 aa16.24■□□□□ 0.19
TM9SF1-211ENST00000531406 ZNF594Q96JF6 807 aaPredicted RBP16.24■□□□□ 0.19
TM9SF1-211ENST00000531406 C9orf78Q9NZ63 289 aaPredicted RBP16.24■□□□□ 0.19
TM9SF1-211ENST00000531406 ALDH1L1O75891 902 aa16.23■□□□□ 0.19
TM9SF1-211ENST00000531406 IL1R1P14778 569 aa16.23■□□□□ 0.19
TM9SF1-211ENST00000531406 MLLT1Q03111 559 aaPredicted RBP16.23■□□□□ 0.19
TM9SF1-211ENST00000531406 TAF7LQ5H9L4 462 aa16.23■□□□□ 0.19
TM9SF1-211ENST00000531406 MTMR14Q8NCE2 650 aa16.23■□□□□ 0.19
TM9SF1-211ENST00000531406 SRCIN1Q9C0H9 1055 aa16.23■□□□□ 0.19
TM9SF1-211ENST00000531406 SPEF2Q9C093 1822 aa16.23■□□□□ 0.19
TM9SF1-211ENST00000531406 MYH3P11055 1940 aa16.23■□□□□ 0.19
TM9SF1-211ENST00000531406 PLIN1O60240 522 aa16.22■□□□□ 0.19
TM9SF1-211ENST00000531406 PTPN12Q05209 780 aaKnown RBP16.22■□□□□ 0.19
TM9SF1-211ENST00000531406 PRKG1Q13976 671 aa16.22■□□□□ 0.19
TM9SF1-211ENST00000531406 SLC4A10Q6U841 1118 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms