RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CCDC102AQ96A19 550 aa23.65■■□□□ 1.38
SSSCA1-206ENST00000531405 MXD3Q9BW11 206 aa23.65■■□□□ 1.38
SSSCA1-206ENST00000531405 BSDC1Q9NW68 430 aaPredicted RBP23.65■■□□□ 1.38
SSSCA1-206ENST00000531405 MED23Q9ULK4 1368 aa23.65■■□□□ 1.38
SSSCA1-206ENST00000531405 SLC4A2P04920 1241 aa23.64■■□□□ 1.37
SSSCA1-206ENST00000531405 DGKZQ13574 1117 aa23.64■■□□□ 1.37
SSSCA1-206ENST00000531405 PODNQ7Z5L7 613 aa23.64■■□□□ 1.37
SSSCA1-206ENST00000531405 SLC10A3P09131 477 aa23.63■■□□□ 1.37
SSSCA1-206ENST00000531405 CCT4P50991 539 aaKnown RBP23.63■■□□□ 1.37
SSSCA1-206ENST00000531405 CCDC27Q2M243 656 aa23.63■■□□□ 1.37
SSSCA1-206ENST00000531405 H7C1W4 665 aa23.62■■□□□ 1.37
SSSCA1-206ENST00000531405 FBXW7Q969H0 707 aa23.62■■□□□ 1.37
SSSCA1-206ENST00000531405 TXNRD3Q86VQ6 643 aa23.61■■□□□ 1.37
SSSCA1-206ENST00000531405 TRPA1O75762 1119 aa23.6■■□□□ 1.37
SSSCA1-206ENST00000531405 NBPF9Q3BBW0 867 aa23.6■■□□□ 1.37
SSSCA1-206ENST00000531405 DACT2Q5SW24 774 aa23.6■■□□□ 1.37
SSSCA1-206ENST00000531405 MOB2Q70IA6 237 aa23.6■■□□□ 1.37
SSSCA1-206ENST00000531405 RNF186Q9NXI6 227 aa23.6■■□□□ 1.37
SSSCA1-206ENST00000531405 PITPNM2Q9BZ72 1349 aa23.59■■□□□ 1.37
SSSCA1-206ENST00000531405 KLRK1P26718 216 aa23.59■■□□□ 1.37
SSSCA1-206ENST00000531405 FLIIQ13045 1269 aa23.59■■□□□ 1.37
SSSCA1-206ENST00000531405 GCKRQ14397 625 aa23.59■■□□□ 1.37
SSSCA1-206ENST00000531405 PRAMEF18Q5VWM3 479 aa23.59■■□□□ 1.37
SSSCA1-206ENST00000531405 RASAL3Q86YV0 1011 aa23.59■■□□□ 1.37
SSSCA1-206ENST00000531405 CSRNP1Q96S65 589 aa23.59■■□□□ 1.37
SSSCA1-206ENST00000531405 SAGE1Q9NXZ1 904 aa23.59■■□□□ 1.37
SSSCA1-206ENST00000531405 ITGA6P23229 1130 aa23.58■■□□□ 1.37
SSSCA1-206ENST00000531405 IGHMBP2P38935 993 aaKnown RBP23.58■■□□□ 1.37
SSSCA1-206ENST00000531405 ECM29Q5VYK3 1845 aa23.58■■□□□ 1.37
SSSCA1-206ENST00000531405 IL16Q14005 1332 aa23.58■■□□□ 1.36
SSSCA1-206ENST00000531405 FANCIQ9NVI1 1328 aa23.58■■□□□ 1.36
SSSCA1-206ENST00000531405 CASP7P55210 303 aa23.57■■□□□ 1.36
SSSCA1-206ENST00000531405 MLLT1Q03111 559 aaPredicted RBP23.57■■□□□ 1.36
SSSCA1-206ENST00000531405 FKBP5Q13451 457 aaPredicted RBP23.57■■□□□ 1.36
SSSCA1-206ENST00000531405 COA1Q9GZY4 146 aa23.57■■□□□ 1.36
SSSCA1-206ENST00000531405 RGS19P49795 217 aa23.56■■□□□ 1.36
SSSCA1-206ENST00000531405 DNAAF4Q8WXU2 420 aa23.56■■□□□ 1.36
SSSCA1-206ENST00000531405 PLA2G12BQ9BX93 195 aa23.56■■□□□ 1.36
SSSCA1-206ENST00000531405 LEMD3Q9Y2U8 911 aa23.56■■□□□ 1.36
SSSCA1-206ENST00000531405 ZNF804BA4D1E1 1349 aa23.56■■□□□ 1.36
SSSCA1-206ENST00000531405 FKBP1BP68106 108 aa23.55■■□□□ 1.36
SSSCA1-206ENST00000531405 STRIP1Q5VSL9 837 aa23.55■■□□□ 1.36
SSSCA1-206ENST00000531405 OGFOD1Q8N543 542 aa23.55■■□□□ 1.36
SSSCA1-206ENST00000531405 SALL2Q9Y467 1007 aaPredicted RBP23.55■■□□□ 1.36
SSSCA1-206ENST00000531405 UBE2Q2LH0YL09 131 aa23.54■■□□□ 1.36
SSSCA1-206ENST00000531405 WNT10BO00744 389 aa23.54■■□□□ 1.36
SSSCA1-206ENST00000531405 SASH1O94885 1247 aa23.54■■□□□ 1.36
SSSCA1-206ENST00000531405 MPHOSPH8Q99549 860 aa23.54■■□□□ 1.36
SSSCA1-206ENST00000531405 MYH16Q9H6N6 1097 aa23.54■■□□□ 1.36
SSSCA1-206ENST00000531405 MYO3BQ8WXR4 1341 aa23.54■■□□□ 1.36
SSSCA1-206ENST00000531405 CSF1RP07333 972 aa23.53■■□□□ 1.36
SSSCA1-206ENST00000531405 LINS1Q8NG48 757 aa23.53■■□□□ 1.36
SSSCA1-206ENST00000531405 ANKRD2Q9GZV1 360 aa23.53■■□□□ 1.36
SSSCA1-206ENST00000531405 MRS2Q9HD23 443 aa23.53■■□□□ 1.36
SSSCA1-206ENST00000531405 CHRNDQ07001 517 aa23.52■■□□□ 1.36
SSSCA1-206ENST00000531405 TTLL5Q6EMB2 1281 aa23.52■■□□□ 1.36
SSSCA1-206ENST00000531405 KIAA0825Q8IV33 1275 aa23.52■■□□□ 1.36
SSSCA1-206ENST00000531405 SNAP23O00161 211 aa23.51■■□□□ 1.35
SSSCA1-206ENST00000531405 VAMP4O75379 141 aa23.51■■□□□ 1.35
SSSCA1-206ENST00000531405 GTF2IP78347 998 aa23.51■■□□□ 1.35
SSSCA1-206ENST00000531405 TTLL12Q14166 644 aaPredicted RBP23.51■■□□□ 1.35
SSSCA1-206ENST00000531405 KCNJ4P48050 445 aa23.5■■□□□ 1.35
SSSCA1-206ENST00000531405 EXOSC9Q06265 439 aaKnown RBP23.5■■□□□ 1.35
SSSCA1-206ENST00000531405 ANKRD18BA2A2Z9 1011 aa23.49■■□□□ 1.35
SSSCA1-206ENST00000531405 F6X3S4 739 aa23.49■■□□□ 1.35
SSSCA1-206ENST00000531405 TAF5LO75529 589 aa23.49■■□□□ 1.35
SSSCA1-206ENST00000531405 HELBQ8NG08 1087 aaPredicted RBP23.49■■□□□ 1.35
SSSCA1-206ENST00000531405 PDE4DIPQ5VU43 2346 aa23.49■■□□□ 1.35
SSSCA1-206ENST00000531405 FOXO4P98177 505 aa23.48■■□□□ 1.35
SSSCA1-206ENST00000531405 NCBP3Q53F19 620 aaKnown RBP23.48■■□□□ 1.35
SSSCA1-206ENST00000531405 REM2Q8IYK8 340 aaPredicted RBP23.48■■□□□ 1.35
SSSCA1-206ENST00000531405 CHMP3Q9Y3E7 222 aa23.48■■□□□ 1.35
SSSCA1-206ENST00000531405 IRS2Q9Y4H2 1338 aa23.48■■□□□ 1.35
SSSCA1-206ENST00000531405 MKRN3Q13064 507 aaKnown RBP23.47■■□□□ 1.35
SSSCA1-206ENST00000531405 PRKG1Q13976 671 aa23.47■■□□□ 1.35
SSSCA1-206ENST00000531405 CD209Q9NNX6 404 aa23.47■■□□□ 1.35
SSSCA1-206ENST00000531405 NF2P35240 595 aa23.46■■□□□ 1.35
SSSCA1-206ENST00000531405 WDR63Q8IWG1 891 aa23.46■■□□□ 1.35
SSSCA1-206ENST00000531405 ZBED3Q96IU2 234 aaPredicted RBP23.46■■□□□ 1.35
SSSCA1-206ENST00000531405 SPINK5Q9NQ38 1064 aaPredicted RBP23.46■■□□□ 1.35
SSSCA1-206ENST00000531405 HDAC9Q9UKV0 1011 aa23.46■■□□□ 1.35
SSSCA1-206ENST00000531405 IFIT5Q13325 482 aaKnown RBP23.45■■□□□ 1.34
SSSCA1-206ENST00000531405 BEND3Q5T5X7 828 aa23.45■■□□□ 1.34
SSSCA1-206ENST00000531405 APOBEC3FQ8IUX4 373 aaKnown RBP23.45■■□□□ 1.34
SSSCA1-206ENST00000531405 CERS5Q8N5B7 392 aa23.45■■□□□ 1.34
SSSCA1-206ENST00000531405 TBC1D8O95759 1140 aa23.44■■□□□ 1.34
SSSCA1-206ENST00000531405 SOX10P56693 466 aa23.44■■□□□ 1.34
SSSCA1-206ENST00000531405 PTPN12Q05209 780 aaKnown RBP23.44■■□□□ 1.34
SSSCA1-206ENST00000531405 CTU1Q7Z7A3 348 aaKnown RBP23.44■■□□□ 1.34
SSSCA1-206ENST00000531405 FZD1Q9UP38 647 aa23.44■■□□□ 1.34
SSSCA1-206ENST00000531405 PCDHAC2Q9Y5I4 1007 aa23.44■■□□□ 1.34
SSSCA1-206ENST00000531405 LAMB1P07942 1786 aa23.43■■□□□ 1.34
SSSCA1-206ENST00000531405 MMP14P50281 582 aa23.43■■□□□ 1.34
SSSCA1-206ENST00000531405 EPHA10Q5JZY3 1008 aa23.43■■□□□ 1.34
SSSCA1-206ENST00000531405 ZNF594Q96JF6 807 aaPredicted RBP23.43■■□□□ 1.34
SSSCA1-206ENST00000531405 F8W031 263 aaPredicted RBP23.42■■□□□ 1.34
SSSCA1-206ENST00000531405 LMBR1LQ6UX01 489 aa23.42■■□□□ 1.34
SSSCA1-206ENST00000531405 JAG2Q9Y219 1238 aa23.42■■□□□ 1.34
SSSCA1-206ENST00000531405 ARAP2Q8WZ64 1704 aa23.42■■□□□ 1.34
SSSCA1-206ENST00000531405 DLGAP5Q15398 846 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms