RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 DPP8Q6V1X1 898 aaPredicted RBP23.32■■□□□ 1.32
SMPD1-205ENST00000531303 ECHDC1Q9NTX5 307 aa23.32■■□□□ 1.32
SMPD1-205ENST00000531303 LEMD3Q9Y2U8 911 aa23.32■■□□□ 1.32
SMPD1-205ENST00000531303 TBC1D16Q8TBP0 767 aa23.31■■□□□ 1.32
SMPD1-205ENST00000531303 SYT17Q9BSW7 474 aa23.31■■□□□ 1.32
SMPD1-205ENST00000531303 PODXL2Q9NZ53 605 aa23.31■■□□□ 1.32
SMPD1-205ENST00000531303 POLLQ9UGP5 575 aa23.31■■□□□ 1.32
SMPD1-205ENST00000531303 STAP2Q9UGK3 403 aa23.3■■□□□ 1.32
SMPD1-205ENST00000531303 GYG1P46976 350 aa23.3■■□□□ 1.32
SMPD1-205ENST00000531303 TTC39AQ5SRH9 613 aa23.3■■□□□ 1.32
SMPD1-205ENST00000531303 ARAP2Q8WZ64 1704 aa23.29■■□□□ 1.32
SMPD1-205ENST00000531303 PHKA1P46020 1223 aa23.29■■□□□ 1.32
SMPD1-205ENST00000531303 BCAMP50895 628 aa23.29■■□□□ 1.32
SMPD1-205ENST00000531303 CCDC158Q5M9N0 1113 aa23.29■■□□□ 1.32
SMPD1-205ENST00000531303 TXNRD3Q86VQ6 643 aa23.29■■□□□ 1.32
SMPD1-205ENST00000531303 LTBP1Q14766 1721 aa23.28■■□□□ 1.32
SMPD1-205ENST00000531303 TTC41PQ6P2S7 1318 aa23.28■■□□□ 1.32
SMPD1-205ENST00000531303 RIMBP2O15034 1052 aa23.28■■□□□ 1.32
SMPD1-205ENST00000531303 CCDC93Q567U6 631 aa23.28■■□□□ 1.32
SMPD1-205ENST00000531303 CCDC102BQ68D86 513 aa23.28■■□□□ 1.32
SMPD1-205ENST00000531303 CC2D2BQ6DHV5 1058 aa23.28■■□□□ 1.32
SMPD1-205ENST00000531303 VPS37DQ86XT2 251 aa23.28■■□□□ 1.32
SMPD1-205ENST00000531303 MAP4K4O95819 1239 aaPredicted RBP23.27■■□□□ 1.32
SMPD1-205ENST00000531303 CAVIN4Q5BKX8 364 aa23.27■■□□□ 1.32
SMPD1-205ENST00000531303 PI4K2BQ8TCG2 481 aa23.27■■□□□ 1.32
SMPD1-205ENST00000531303 BOLA2Q9H3K6 86 aa23.27■■□□□ 1.32
SMPD1-205ENST00000531303 OSBPL3Q9H4L5 887 aa23.27■■□□□ 1.32
SMPD1-205ENST00000531303 ERC2O15083 957 aa23.26■■□□□ 1.31
SMPD1-205ENST00000531303 TTC22Q5TAA0 569 aa23.26■■□□□ 1.31
SMPD1-205ENST00000531303 FAM84BQ96KN1 310 aaPredicted RBP23.26■■□□□ 1.31
SMPD1-205ENST00000531303 DUOX1Q9NRD9 1551 aa23.25■■□□□ 1.31
SMPD1-205ENST00000531303 ATP5JP18859 108 aa23.25■■□□□ 1.31
SMPD1-205ENST00000531303 RTKN2Q8IZC4 609 aa23.25■■□□□ 1.31
SMPD1-205ENST00000531303 IQSEC3Q9UPP2 1182 aaPredicted RBP23.25■■□□□ 1.31
SMPD1-205ENST00000531303 AOX1Q06278 1338 aa23.25■■□□□ 1.31
SMPD1-205ENST00000531303 GLRX3O76003 335 aaKnown RBP23.24■■□□□ 1.31
SMPD1-205ENST00000531303 SNRKQ9NRH2 765 aa23.24■■□□□ 1.31
SMPD1-205ENST00000531303 NDUFB9Q9Y6M9 179 aa23.24■■□□□ 1.31
SMPD1-205ENST00000531303 HIBADHP31937 336 aaKnown RBP23.24■■□□□ 1.31
SMPD1-205ENST00000531303 SCARF1Q14162 830 aa23.24■■□□□ 1.31
SMPD1-205ENST00000531303 SOGA3Q5TF21 947 aa23.24■■□□□ 1.31
SMPD1-205ENST00000531303 PELP1Q8IZL8 1130 aaKnown RBP23.24■■□□□ 1.31
SMPD1-205ENST00000531303 DNAJC2Q99543 621 aaKnown RBP23.24■■□□□ 1.31
SMPD1-205ENST00000531303 ZC3H12CQ9C0D7 883 aaKnown RBP23.24■■□□□ 1.31
SMPD1-205ENST00000531303 IRS2Q9Y4H2 1338 aa23.23■■□□□ 1.31
SMPD1-205ENST00000531303 TRIM6-TRIM34B2RNG4 842 aa23.23■■□□□ 1.31
SMPD1-205ENST00000531303 GSPT1P15170 499 aaKnown RBP23.23■■□□□ 1.31
SMPD1-205ENST00000531303 WASHC4Q2M389 1173 aa23.23■■□□□ 1.31
SMPD1-205ENST00000531303 FBXO33Q7Z6M2 555 aa23.23■■□□□ 1.31
SMPD1-205ENST00000531303 EYA3Q99504 573 aa23.23■■□□□ 1.31
SMPD1-205ENST00000531303 UQCRFS1P1P0C7P4 283 aa23.22■■□□□ 1.31
SMPD1-205ENST00000531303 GRIPAP1Q4V328 841 aa23.22■■□□□ 1.31
SMPD1-205ENST00000531303 ZNF804AQ7Z570 1209 aa23.22■■□□□ 1.31
SMPD1-205ENST00000531303 SNED1Q8TER0 1413 aa23.22■■□□□ 1.31
SMPD1-205ENST00000531303 GNL3LQ9NVN8 582 aaKnown RBP23.22■■□□□ 1.31
SMPD1-205ENST00000531303 MED23Q9ULK4 1368 aa23.21■■□□□ 1.31
SMPD1-205ENST00000531303 FRAT2O75474 233 aaPredicted RBP23.21■■□□□ 1.31
SMPD1-205ENST00000531303 FKBP4Q02790 459 aaKnown RBP eCLIP23.21■■□□□ 1.31
SMPD1-205ENST00000531303 PI16Q6UXB8 463 aa23.21■■□□□ 1.31
SMPD1-205ENST00000531303 C15orf52Q6ZUT6 534 aaKnown RBP23.21■■□□□ 1.31
SMPD1-205ENST00000531303 SUPT20HQ8NEM7 779 aa23.21■■□□□ 1.31
SMPD1-205ENST00000531303 RILPL2Q969X0 211 aa23.21■■□□□ 1.31
SMPD1-205ENST00000531303 RTFDC1Q9BY42 306 aaPredicted RBP23.21■■□□□ 1.31
SMPD1-205ENST00000531303 ARFGEF1Q9Y6D6 1849 aa23.21■■□□□ 1.31
SMPD1-205ENST00000531303 G3V3G9 751 aa23.2■■□□□ 1.3
SMPD1-205ENST00000531303 ARID4AP29374 1257 aaPredicted RBP23.2■■□□□ 1.3
SMPD1-205ENST00000531303 MCAMP43121 646 aa23.2■■□□□ 1.3
SMPD1-205ENST00000531303 DOK7Q18PE1 504 aa23.2■■□□□ 1.3
SMPD1-205ENST00000531303 DCAF8Q5TAQ9 597 aa23.2■■□□□ 1.3
SMPD1-205ENST00000531303 EDC3Q96F86 508 aaKnown RBP23.2■■□□□ 1.3
SMPD1-205ENST00000531303 ZNF277Q9NRM2 450 aaPredicted RBP23.2■■□□□ 1.3
SMPD1-205ENST00000531303 AKAP11Q9UKA4 1901 aa23.19■■□□□ 1.3
SMPD1-205ENST00000531303 RASGRF1Q13972 1273 aa23.19■■□□□ 1.3
SMPD1-205ENST00000531303 AOC3Q16853 763 aa23.19■■□□□ 1.3
SMPD1-205ENST00000531303 HAUS7Q99871 368 aa23.19■■□□□ 1.3
SMPD1-205ENST00000531303 FER1L6Q2WGJ9 1857 aa23.19■■□□□ 1.3
SMPD1-205ENST00000531303 MYH13Q9UKX3 1938 aa23.19■■□□□ 1.3
SMPD1-205ENST00000531303 SDSP20132 328 aa23.18■■□□□ 1.3
SMPD1-205ENST00000531303 BMP2KLQ5H9B9 411 aa23.18■■□□□ 1.3
SMPD1-205ENST00000531303 ZNF512BQ96KM6 892 aaPredicted RBP23.18■■□□□ 1.3
SMPD1-205ENST00000531303 PSMD1Q99460 953 aa23.18■■□□□ 1.3
SMPD1-205ENST00000531303 HMG20BQ9P0W2 317 aa23.18■■□□□ 1.3
SMPD1-205ENST00000531303 AK9Q5TCS8 1911 aa23.18■■□□□ 1.3
SMPD1-205ENST00000531303 GOLIM4O00461 696 aa23.17■■□□□ 1.3
SMPD1-205ENST00000531303 PPIP5K2O43314 1243 aa23.17■■□□□ 1.3
SMPD1-205ENST00000531303 ZAP70P43403 619 aa23.17■■□□□ 1.3
SMPD1-205ENST00000531303 CHAF1AQ13111 956 aaPredicted RBP23.17■■□□□ 1.3
SMPD1-205ENST00000531303 SPATA5Q8NB90 893 aa23.17■■□□□ 1.3
SMPD1-205ENST00000531303 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.17■■□□□ 1.3
SMPD1-205ENST00000531303 CD209Q9NNX6 404 aa23.17■■□□□ 1.3
SMPD1-205ENST00000531303 JAG2Q9Y219 1238 aa23.17■■□□□ 1.3
SMPD1-205ENST00000531303 GOLGB1Q14789 3259 aaKnown RBP23.17■■□□□ 1.3
SMPD1-205ENST00000531303 TAOK3Q9H2K8 898 aa23.17■■□□□ 1.3
SMPD1-205ENST00000531303 DBNDD1Q9H9R9 158 aa23.17■■□□□ 1.3
SMPD1-205ENST00000531303 NFKBIEO00221 500 aa23.16■■□□□ 1.3
SMPD1-205ENST00000531303 ARHGAP27Q6ZUM4 889 aa23.16■■□□□ 1.3
SMPD1-205ENST00000531303 ANTXR1Q9H6X2 564 aa23.16■■□□□ 1.3
SMPD1-205ENST00000531303 PAG1Q9NWQ8 432 aa23.16■■□□□ 1.3
SMPD1-205ENST00000531303 CHD4Q14839 1912 aa23.15■■□□□ 1.3
SMPD1-205ENST00000531303 SRCAPQ6ZRS2 3230 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms