RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 GMLQ99445 158 aa28.3■■■□□ 2.12
TRAPPC4-210ENST00000531290 COA1Q9GZY4 146 aa28.3■■■□□ 2.12
TRAPPC4-210ENST00000531290 GGA3Q9NZ52 723 aa28.3■■■□□ 2.12
TRAPPC4-210ENST00000531290 ZNF804BA4D1E1 1349 aa28.29■■■□□ 2.12
TRAPPC4-210ENST00000531290 KCNJ4P48050 445 aa28.29■■■□□ 2.12
TRAPPC4-210ENST00000531290 HUNKP57058 714 aa28.29■■■□□ 2.12
TRAPPC4-210ENST00000531290 SCARF1Q14162 830 aa28.29■■■□□ 2.12
TRAPPC4-210ENST00000531290 FBXW7Q969H0 707 aa28.29■■■□□ 2.12
TRAPPC4-210ENST00000531290 CHMP3Q9Y3E7 222 aa28.29■■■□□ 2.12
TRAPPC4-210ENST00000531290 IFIT5Q13325 482 aaKnown RBP28.28■■■□□ 2.12
TRAPPC4-210ENST00000531290 MYOZ2Q9NPC6 264 aa28.28■■■□□ 2.12
TRAPPC4-210ENST00000531290 GBA2Q9HCG7 927 aaPredicted RBP28.27■■■□□ 2.12
TRAPPC4-210ENST00000531290 ZNF609O15014 1411 aa28.26■■■□□ 2.12
TRAPPC4-210ENST00000531290 ASTN2O75129 1339 aaPredicted RBP28.26■■■□□ 2.11
TRAPPC4-210ENST00000531290 FOXO4P98177 505 aa28.26■■■□□ 2.11
TRAPPC4-210ENST00000531290 CHRNDQ07001 517 aa28.26■■■□□ 2.11
TRAPPC4-210ENST00000531290 STRIP1Q5VSL9 837 aa28.26■■■□□ 2.11
TRAPPC4-210ENST00000531290 ANGEL2Q5VTE6 544 aaKnown RBP28.26■■■□□ 2.11
TRAPPC4-210ENST00000531290 SLC4A10Q6U841 1118 aa28.26■■■□□ 2.11
TRAPPC4-210ENST00000531290 OGFOD1Q8N543 542 aa28.26■■■□□ 2.11
TRAPPC4-210ENST00000531290 C9orf78Q9NZ63 289 aaPredicted RBP28.26■■■□□ 2.11
TRAPPC4-210ENST00000531290 GRM8O00222 908 aa28.25■■■□□ 2.11
TRAPPC4-210ENST00000531290 DACT2Q5SW24 774 aa28.25■■■□□ 2.11
TRAPPC4-210ENST00000531290 TXNRD3Q86VQ6 643 aa28.25■■■□□ 2.11
TRAPPC4-210ENST00000531290 MYO3BQ8WXR4 1341 aa28.23■■■□□ 2.11
TRAPPC4-210ENST00000531290 NOGQ13253 232 aa28.23■■■□□ 2.11
TRAPPC4-210ENST00000531290 CCDC57Q2TAC2 916 aa28.23■■■□□ 2.11
TRAPPC4-210ENST00000531290 TTLL5Q6EMB2 1281 aa28.23■■■□□ 2.11
TRAPPC4-210ENST00000531290 LMBR1LQ6UX01 489 aa28.23■■■□□ 2.11
TRAPPC4-210ENST00000531290 MXD3Q9BW11 206 aa28.23■■■□□ 2.11
TRAPPC4-210ENST00000531290 SRCIN1Q9C0H9 1055 aa28.23■■■□□ 2.11
TRAPPC4-210ENST00000531290 ALDH1L1O75891 902 aa28.22■■■□□ 2.11
TRAPPC4-210ENST00000531290 BRPF1P55201 1214 aaPredicted RBP28.22■■■□□ 2.11
TRAPPC4-210ENST00000531290 TAF7LQ5H9L4 462 aa28.22■■■□□ 2.11
TRAPPC4-210ENST00000531290 RGMBQ6NW40 437 aa28.22■■■□□ 2.11
TRAPPC4-210ENST00000531290 CDCA5Q96FF9 252 aa28.22■■■□□ 2.11
TRAPPC4-210ENST00000531290 ZNF521Q96K83 1311 aa28.21■■■□□ 2.11
TRAPPC4-210ENST00000531290 CA12O43570 354 aa28.21■■■□□ 2.11
TRAPPC4-210ENST00000531290 KLRK1P26718 216 aa28.21■■■□□ 2.11
TRAPPC4-210ENST00000531290 TRPM7Q96QT4 1865 aa28.21■■■□□ 2.11
TRAPPC4-210ENST00000531290 TAF5LO75529 589 aa28.2■■■□□ 2.1
TRAPPC4-210ENST00000531290 HELBQ8NG08 1087 aaPredicted RBP28.2■■■□□ 2.1
TRAPPC4-210ENST00000531290 CCDC102AQ96A19 550 aa28.2■■■□□ 2.1
TRAPPC4-210ENST00000531290 PITPNM2Q9BZ72 1349 aa28.19■■■□□ 2.1
TRAPPC4-210ENST00000531290 MMP14P50281 582 aa28.19■■■□□ 2.1
TRAPPC4-210ENST00000531290 ZNF157P51786 506 aaPredicted RBP28.19■■■□□ 2.1
TRAPPC4-210ENST00000531290 EPHA10Q5JZY3 1008 aa28.19■■■□□ 2.1
TRAPPC4-210ENST00000531290 SCN9AQ15858 1988 aa28.19■■■□□ 2.1
TRAPPC4-210ENST00000531290 E9PSI1 815 aa28.18■■■□□ 2.1
TRAPPC4-210ENST00000531290 GTF2IP78347 998 aa28.18■■■□□ 2.1
TRAPPC4-210ENST00000531290 LDHAL6AQ6ZMR3 332 aa28.18■■■□□ 2.1
TRAPPC4-210ENST00000531290 TSKSQ9UJT2 592 aa28.18■■■□□ 2.1
TRAPPC4-210ENST00000531290 HDAC9Q9UKV0 1011 aa28.18■■■□□ 2.1
TRAPPC4-210ENST00000531290 NBPF9Q3BBW0 867 aa28.17■■■□□ 2.1
TRAPPC4-210ENST00000531290 CD209Q9NNX6 404 aa28.17■■■□□ 2.1
TRAPPC4-210ENST00000531290 CNNM1Q9NRU3 951 aa28.17■■■□□ 2.1
TRAPPC4-210ENST00000531290 SNAP23O00161 211 aa28.16■■■□□ 2.1
TRAPPC4-210ENST00000531290 ZNF594Q96JF6 807 aaPredicted RBP28.16■■■□□ 2.1
TRAPPC4-210ENST00000531290 PLIN1O60240 522 aa28.15■■■□□ 2.1
TRAPPC4-210ENST00000531290 C15orf52Q6ZUT6 534 aaKnown RBP28.15■■■□□ 2.1
TRAPPC4-210ENST00000531290 KIAA0825Q8IV33 1275 aa28.15■■■□□ 2.1
TRAPPC4-210ENST00000531290 ZIC5Q96T25 663 aa28.15■■■□□ 2.1
TRAPPC4-210ENST00000531290 WNT10BO00744 389 aa28.14■■■□□ 2.1
TRAPPC4-210ENST00000531290 ZNF804AQ7Z570 1209 aa28.14■■■□□ 2.1
TRAPPC4-210ENST00000531290 MRPL50Q8N5N7 158 aaKnown RBP28.14■■■□□ 2.1
TRAPPC4-210ENST00000531290 THSD7BQ9C0I4 1608 aa28.14■■■□□ 2.09
TRAPPC4-210ENST00000531290 FAM155AB1AL88 458 aaPredicted RBP28.13■■■□□ 2.09
TRAPPC4-210ENST00000531290 FKBP1BP68106 108 aa28.13■■■□□ 2.09
TRAPPC4-210ENST00000531290 SCAF8Q9UPN6 1271 aaKnown RBP28.13■■■□□ 2.09
TRAPPC4-210ENST00000531290 SUCLG2Q96I99 432 aa28.12■■■□□ 2.09
TRAPPC4-210ENST00000531290 MYH3P11055 1940 aa28.12■■■□□ 2.09
TRAPPC4-210ENST00000531290 SASH1O94885 1247 aa28.11■■■□□ 2.09
TRAPPC4-210ENST00000531290 KIF23Q02241 960 aaPredicted RBP28.11■■■□□ 2.09
TRAPPC4-210ENST00000531290 NBPF7P0C2Y1 421 aaPredicted RBP28.1■■■□□ 2.09
TRAPPC4-210ENST00000531290 SLFN5Q08AF3 891 aa28.1■■■□□ 2.09
TRAPPC4-210ENST00000531290 PRAMEF18Q5VWM3 479 aa28.1■■■□□ 2.09
TRAPPC4-210ENST00000531290 PTPRCP08575 1304 aa28.1■■■□□ 2.09
TRAPPC4-210ENST00000531290 IRS2Q9Y4H2 1338 aa28.1■■■□□ 2.09
TRAPPC4-210ENST00000531290 IL1R1P14778 569 aa28.09■■■□□ 2.09
TRAPPC4-210ENST00000531290 CACNA1FO60840 1977 aa28.09■■■□□ 2.09
TRAPPC4-210ENST00000531290 SLC10A3P09131 477 aa28.08■■■□□ 2.09
TRAPPC4-210ENST00000531290 NF2P35240 595 aa28.08■■■□□ 2.09
TRAPPC4-210ENST00000531290 SSH1Q8WYL5 1049 aa28.08■■■□□ 2.09
TRAPPC4-210ENST00000531290 KAZALD1Q96I82 304 aa28.08■■■□□ 2.09
TRAPPC4-210ENST00000531290 UTYO14607 1347 aa28.08■■■□□ 2.09
TRAPPC4-210ENST00000531290 TTLL12Q14166 644 aaPredicted RBP28.07■■■□□ 2.08
TRAPPC4-210ENST00000531290 DLGAP5Q15398 846 aa28.07■■■□□ 2.08
TRAPPC4-210ENST00000531290 APOBEC3FQ8IUX4 373 aaKnown RBP28.07■■■□□ 2.08
TRAPPC4-210ENST00000531290 ABHD8Q96I13 439 aa28.07■■■□□ 2.08
TRAPPC4-210ENST00000531290 UBE2Q2LH0YL09 131 aa28.05■■■□□ 2.08
TRAPPC4-210ENST00000531290 UBE4AQ14139 1066 aa28.05■■■□□ 2.08
TRAPPC4-210ENST00000531290 MOB2Q70IA6 237 aa28.05■■■□□ 2.08
TRAPPC4-210ENST00000531290 CERS5Q8N5B7 392 aa28.05■■■□□ 2.08
TRAPPC4-210ENST00000531290 SPEF2Q9C093 1822 aa28.05■■■□□ 2.08
TRAPPC4-210ENST00000531290 BICC1Q9H694 974 aaKnown RBP28.05■■■□□ 2.08
TRAPPC4-210ENST00000531290 F8W031 263 aaPredicted RBP28.04■■■□□ 2.08
TRAPPC4-210ENST00000531290 FKBP1AP62942 108 aaKnown RBP28.04■■■□□ 2.08
TRAPPC4-210ENST00000531290 REM2Q8IYK8 340 aaPredicted RBP28.04■■■□□ 2.08
TRAPPC4-210ENST00000531290 ZBED3Q96IU2 234 aaPredicted RBP28.04■■■□□ 2.08
TRAPPC4-210ENST00000531290 PUS3Q9BZE2 481 aaKnown RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms