RNA–Protein interactions for RNA: ENST00000531242.1

NUCB2-213, Transcript of nucleobindin 2, humanhuman

TSL 2

Gene NUCB2, Length 639 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-213ENST00000531242 COL13A1Q5TAT6 717 aaPredicted RBP11.28□□□□□ -0.6
NUCB2-213ENST00000531242 NANOS1Q8WY41 292 aaKnown RBP11.28□□□□□ -0.6
NUCB2-213ENST00000531242 CNTNAP3BQ96NU0 1288 aa11.28□□□□□ -0.6
NUCB2-213ENST00000531242 CNTNAP3Q9BZ76 1288 aa11.28□□□□□ -0.6
NUCB2-213ENST00000531242 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.28□□□□□ -0.6
NUCB2-213ENST00000531242 SIN3BO75182 1162 aa11.27□□□□□ -0.61
NUCB2-213ENST00000531242 GHRHP01286 108 aa11.27□□□□□ -0.61
NUCB2-213ENST00000531242 GRIN2CQ14957 1233 aa11.27□□□□□ -0.61
NUCB2-213ENST00000531242 SV2AQ7L0J3 742 aa11.27□□□□□ -0.61
NUCB2-213ENST00000531242 NXPE3Q969Y0 559 aa11.27□□□□□ -0.61
NUCB2-213ENST00000531242 NSUN5Q96P11 429 aaKnown RBP11.27□□□□□ -0.61
NUCB2-213ENST00000531242 PBX4Q9BYU1 374 aa11.27□□□□□ -0.61
NUCB2-213ENST00000531242 TNNI2P48788 182 aa11.26□□□□□ -0.61
NUCB2-213ENST00000531242 ZNF468Q5VIY5 522 aaPredicted RBP11.26□□□□□ -0.61
NUCB2-213ENST00000531242 KBTBD4Q9NVX7 518 aa11.26□□□□□ -0.61
NUCB2-213ENST00000531242 NFKBIEO00221 500 aa11.25□□□□□ -0.61
NUCB2-213ENST00000531242 PDE2AO00408 941 aaPredicted RBP11.25□□□□□ -0.61
NUCB2-213ENST00000531242 DNAJA1P31689 397 aaKnown RBP11.25□□□□□ -0.61
NUCB2-213ENST00000531242 RAB44Q7Z6P3 723 aaPredicted RBP11.25□□□□□ -0.61
NUCB2-213ENST00000531242 RASGRP4Q8TDF6 673 aa11.25□□□□□ -0.61
NUCB2-213ENST00000531242 TMEM74Q96NL1 305 aa11.25□□□□□ -0.61
NUCB2-213ENST00000531242 A0A096LPE4 126 aa11.24□□□□□ -0.61
NUCB2-213ENST00000531242 A0A1W2PPZ6 126 aa11.24□□□□□ -0.61
NUCB2-213ENST00000531242 PPFIA3O75145 1194 aa11.24□□□□□ -0.61
NUCB2-213ENST00000531242 SMNDC1O75940 238 aaKnown RBP eCLIP11.24□□□□□ -0.61
NUCB2-213ENST00000531242 SOGA3Q5TF21 947 aa11.24□□□□□ -0.61
NUCB2-213ENST00000531242 SYT9Q86SS6 491 aa11.24□□□□□ -0.61
NUCB2-213ENST00000531242 KIAA0825Q8IV33 1275 aa11.24□□□□□ -0.61
NUCB2-213ENST00000531242 TNFRSF25Q93038 417 aa11.24□□□□□ -0.61
NUCB2-213ENST00000531242 GPRASP2Q96D09 838 aa11.24□□□□□ -0.61
NUCB2-213ENST00000531242 SPON2Q9BUD6 331 aa11.24□□□□□ -0.61
NUCB2-213ENST00000531242 IRX2Q9BZI1 471 aaPredicted RBP11.24□□□□□ -0.61
NUCB2-213ENST00000531242 GMPR2Q9P2T1 348 aaKnown RBP11.24□□□□□ -0.61
NUCB2-213ENST00000531242 BMP4P12644 408 aa11.23□□□□□ -0.61
NUCB2-213ENST00000531242 GRIA4P48058 902 aa11.23□□□□□ -0.61
NUCB2-213ENST00000531242 CTBSQ01459 385 aa11.23□□□□□ -0.61
NUCB2-213ENST00000531242 PAK2Q13177 524 aa11.23□□□□□ -0.61
NUCB2-213ENST00000531242 UBE2OQ9C0C9 1292 aaKnown RBP11.23□□□□□ -0.61
NUCB2-213ENST00000531242 COPRSQ9NQ92 184 aa11.23□□□□□ -0.61
NUCB2-213ENST00000531242 DNAJB12Q9NXW2 375 aaKnown RBP11.23□□□□□ -0.61
NUCB2-213ENST00000531242 CDC14CA4D256 554 aa11.22□□□□□ -0.61
NUCB2-213ENST00000531242 ZBTB42B2RXF5 422 aa11.22□□□□□ -0.61
NUCB2-213ENST00000531242 GBP2P32456 591 aaPredicted RBP11.22□□□□□ -0.61
NUCB2-213ENST00000531242 RPS26P62854 115 aaKnown RBP11.22□□□□□ -0.61
NUCB2-213ENST00000531242 MAP3K10Q02779 954 aa11.22□□□□□ -0.61
NUCB2-213ENST00000531242 SEC16BQ96JE7 1060 aa11.22□□□□□ -0.61
NUCB2-213ENST00000531242 NSFL1CQ9UNZ2 370 aaKnown RBP11.22□□□□□ -0.61
NUCB2-213ENST00000531242 SAMM50Q9Y512 469 aa11.22□□□□□ -0.61
NUCB2-213ENST00000531242 ATF4P18848 351 aaPredicted RBP11.21□□□□□ -0.61
NUCB2-213ENST00000531242 EIF4A3P38919 411 aaKnown RBP11.21□□□□□ -0.61
NUCB2-213ENST00000531242 TPTE2Q6XPS3 522 aa11.21□□□□□ -0.61
NUCB2-213ENST00000531242 CACTIN-AS1Q8N1I8 211 aa11.21□□□□□ -0.61
NUCB2-213ENST00000531242 NECAB3Q96P71 396 aaPredicted RBP11.21□□□□□ -0.61
NUCB2-213ENST00000531242 HIRIP3Q9BW71 556 aaPredicted RBP11.21□□□□□ -0.61
NUCB2-213ENST00000531242 ZNF576Q9H609 170 aa11.21□□□□□ -0.61
NUCB2-213ENST00000531242 KCNQ5Q9NR82 932 aa11.21□□□□□ -0.61
NUCB2-213ENST00000531242 C11orf95C9JLR9 678 aaPredicted RBP11.2□□□□□ -0.62
NUCB2-213ENST00000531242 ARAFP10398 606 aa11.2□□□□□ -0.62
NUCB2-213ENST00000531242 ACPPP15309 386 aa11.2□□□□□ -0.62
NUCB2-213ENST00000531242 PPP2R3AQ06190 1150 aa11.2□□□□□ -0.62
NUCB2-213ENST00000531242 COL9A2Q14055 689 aaPredicted RBP11.2□□□□□ -0.62
NUCB2-213ENST00000531242 VWA5B2Q8N398 1253 aa11.2□□□□□ -0.62
NUCB2-213ENST00000531242 MICALL1Q8N3F8 863 aa11.2□□□□□ -0.62
NUCB2-213ENST00000531242 BSNDQ8WZ55 320 aa11.2□□□□□ -0.62
NUCB2-213ENST00000531242 RASSF4Q9H2L5 321 aa11.2□□□□□ -0.62
NUCB2-213ENST00000531242 J3QW42 95 aa11.19□□□□□ -0.62
NUCB2-213ENST00000531242 EIF4EBP3O60516 100 aaPredicted RBP11.19□□□□□ -0.62
NUCB2-213ENST00000531242 SNRPBP14678 240 aaKnown RBP11.19□□□□□ -0.62
NUCB2-213ENST00000531242 EIF2AK2P19525 551 aaKnown RBP11.19□□□□□ -0.62
NUCB2-213ENST00000531242 DIEXFQ68CQ4 756 aaKnown RBP11.19□□□□□ -0.62
NUCB2-213ENST00000531242 ASAP3Q8TDY4 903 aa11.19□□□□□ -0.62
NUCB2-213ENST00000531242 IGFLR1Q9H665 355 aa11.19□□□□□ -0.62
NUCB2-213ENST00000531242 SEC31BQ9NQW1 1179 aa11.19□□□□□ -0.62
NUCB2-213ENST00000531242 FRRS1LQ9P0K9 344 aa11.19□□□□□ -0.62
NUCB2-213ENST00000531242 FAM177BA6PVY3 158 aa11.18□□□□□ -0.62
NUCB2-213ENST00000531242 ADARB2-AS1A8MUL3 147 aa11.18□□□□□ -0.62
NUCB2-213ENST00000531242 MX2P20592 715 aa11.18□□□□□ -0.62
NUCB2-213ENST00000531242 ADH6P28332 368 aa11.18□□□□□ -0.62
NUCB2-213ENST00000531242 GTF2F1P35269 517 aaKnown RBP eCLIP11.18□□□□□ -0.62
NUCB2-213ENST00000531242 MAP2K3P46734 347 aa11.18□□□□□ -0.62
NUCB2-213ENST00000531242 LIG3P49916 1009 aa11.18□□□□□ -0.62
NUCB2-213ENST00000531242 RBL2Q08999 1139 aa11.18□□□□□ -0.62
NUCB2-213ENST00000531242 SPRED3Q2MJR0 410 aa11.18□□□□□ -0.62
NUCB2-213ENST00000531242 RHOVQ96L33 236 aa11.18□□□□□ -0.62
NUCB2-213ENST00000531242 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.18□□□□□ -0.62
NUCB2-213ENST00000531242 NT5C1AQ9BXI3 368 aa11.18□□□□□ -0.62
NUCB2-213ENST00000531242 CLEC4MQ9H2X3 399 aaPredicted RBP11.18□□□□□ -0.62
NUCB2-213ENST00000531242 TMEM39AQ9NV64 488 aa11.18□□□□□ -0.62
NUCB2-213ENST00000531242 SUPT16HQ9Y5B9 1047 aaKnown RBP11.18□□□□□ -0.62
NUCB2-213ENST00000531242 MINDY4BA8MYZ0 360 aa11.17□□□□□ -0.62
NUCB2-213ENST00000531242 GPR25O00155 361 aa11.17□□□□□ -0.62
NUCB2-213ENST00000531242 FGRP09769 529 aa11.17□□□□□ -0.62
NUCB2-213ENST00000531242 PTPRAP18433 802 aa11.17□□□□□ -0.62
NUCB2-213ENST00000531242 CANXP27824 592 aaKnown RBP11.17□□□□□ -0.62
NUCB2-213ENST00000531242 MLLT1Q03111 559 aaPredicted RBP11.17□□□□□ -0.62
NUCB2-213ENST00000531242 LMNB2Q03252 620 aa11.17□□□□□ -0.62
NUCB2-213ENST00000531242 AGMOQ6ZNB7 445 aa11.17□□□□□ -0.62
NUCB2-213ENST00000531242 FAM35AQ86V20 835 aa11.17□□□□□ -0.62
NUCB2-213ENST00000531242 PHC3Q8NDX5 983 aa11.17□□□□□ -0.62
NUCB2-213ENST00000531242 TTC9Q92623 222 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms