RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 HOMER1Q86YM7 354 aa9.4□□□□□ -0.9
CSDE1-214ENST00000530886 FMNL3Q8IVF7 1028 aa9.4□□□□□ -0.9
CSDE1-214ENST00000530886 FAM212AQ96EL1 285 aa9.4□□□□□ -0.9
CSDE1-214ENST00000530886 FAN1Q9Y2M0 1017 aa9.4□□□□□ -0.9
CSDE1-214ENST00000530886 NRXN3Q9Y4C0 1643 aa9.4□□□□□ -0.9
CSDE1-214ENST00000530886 EXOC5O00471 708 aa9.4□□□□□ -0.91
CSDE1-214ENST00000530886 ZSCAN12O43309 604 aa9.4□□□□□ -0.91
CSDE1-214ENST00000530886 ERLIN1O75477 346 aa9.4□□□□□ -0.91
CSDE1-214ENST00000530886 SETQ01105 290 aaPredicted RBP9.4□□□□□ -0.91
CSDE1-214ENST00000530886 TUBB2AQ13885 445 aa9.4□□□□□ -0.91
CSDE1-214ENST00000530886 PREPLQ4J6C6 727 aaPredicted RBP9.4□□□□□ -0.91
CSDE1-214ENST00000530886 WLSQ5T9L3 541 aa9.4□□□□□ -0.91
CSDE1-214ENST00000530886 TEX11Q8IYF3 940 aa9.4□□□□□ -0.91
CSDE1-214ENST00000530886 CNNM3Q8NE01 707 aa9.4□□□□□ -0.91
CSDE1-214ENST00000530886 ITFG2Q969R8 447 aa9.4□□□□□ -0.91
CSDE1-214ENST00000530886 PGBD1Q96JS3 809 aa9.4□□□□□ -0.91
CSDE1-214ENST00000530886 TUBB2BQ9BVA1 445 aa9.4□□□□□ -0.91
CSDE1-214ENST00000530886 NAT10Q9H0A0 1025 aaKnown RBP9.4□□□□□ -0.91
CSDE1-214ENST00000530886 TSPOAP1O95153 1857 aa9.4□□□□□ -0.91
CSDE1-214ENST00000530886 GOLGA6L4A6NEF3 574 aa9.39□□□□□ -0.91
CSDE1-214ENST00000530886 BECN2A8MW95 431 aa9.39□□□□□ -0.91
CSDE1-214ENST00000530886 SF3B2Q13435 895 aaKnown RBP9.39□□□□□ -0.91
CSDE1-214ENST00000530886 PLEKHO1Q53GL0 409 aaPredicted RBP9.39□□□□□ -0.91
CSDE1-214ENST00000530886 AMOTL1Q8IY63 956 aa9.39□□□□□ -0.91
CSDE1-214ENST00000530886 KIFC2Q96AC6 838 aa9.39□□□□□ -0.91
CSDE1-214ENST00000530886 MARF1Q9Y4F3 1742 aaKnown RBP9.39□□□□□ -0.91
CSDE1-214ENST00000530886 FAM83GA6ND36 823 aa9.39□□□□□ -0.91
CSDE1-214ENST00000530886 GIMAP7Q8NHV1 300 aa9.39□□□□□ -0.91
CSDE1-214ENST00000530886 FAM210AQ96ND0 272 aa9.39□□□□□ -0.91
CSDE1-214ENST00000530886 ALDH8A1Q9H2A2 487 aaPredicted RBP9.39□□□□□ -0.91
CSDE1-214ENST00000530886 ACBD3Q9H3P7 528 aa9.39□□□□□ -0.91
CSDE1-214ENST00000530886 USP42Q9H9J4 1324 aaKnown RBP9.39□□□□□ -0.91
CSDE1-214ENST00000530886 VWA3AA6NCI4 1184 aa9.39□□□□□ -0.91
CSDE1-214ENST00000530886 SCP2P22307 547 aa9.39□□□□□ -0.91
CSDE1-214ENST00000530886 GORABQ5T7V8 394 aa9.39□□□□□ -0.91
CSDE1-214ENST00000530886 CWC27Q6UX04 472 aaKnown RBP9.39□□□□□ -0.91
CSDE1-214ENST00000530886 CEP57L1Q8IYX8 460 aa9.39□□□□□ -0.91
CSDE1-214ENST00000530886 NPHP4O75161 1426 aaPredicted RBP9.38□□□□□ -0.91
CSDE1-214ENST00000530886 TTC36A6NLP5 189 aa9.38□□□□□ -0.91
CSDE1-214ENST00000530886 ELL2O00472 640 aaPredicted RBP9.38□□□□□ -0.91
CSDE1-214ENST00000530886 ICA1Q05084 483 aa9.38□□□□□ -0.91
CSDE1-214ENST00000530886 CABS1Q96KC9 395 aa9.38□□□□□ -0.91
CSDE1-214ENST00000530886 GBP3Q9H0R5 595 aa9.38□□□□□ -0.91
CSDE1-214ENST00000530886 ANKZF1Q9H8Y5 726 aa9.38□□□□□ -0.91
CSDE1-214ENST00000530886 ZSWIM6Q9HCJ5 1215 aa9.38□□□□□ -0.91
CSDE1-214ENST00000530886 PNMA6EA0A0J9YXQ4 647 aa9.38□□□□□ -0.91
CSDE1-214ENST00000530886 PRPF6O94906 941 aaKnown RBP9.38□□□□□ -0.91
CSDE1-214ENST00000530886 FBLN1P23142 703 aa9.38□□□□□ -0.91
CSDE1-214ENST00000530886 SCRN1Q12765 414 aa9.38□□□□□ -0.91
CSDE1-214ENST00000530886 GRIK3Q13003 919 aa9.38□□□□□ -0.91
CSDE1-214ENST00000530886 CDC37L1Q7L3B6 337 aa9.38□□□□□ -0.91
CSDE1-214ENST00000530886 NBPF5PQ86XG9 351 aaPredicted RBP9.38□□□□□ -0.91
CSDE1-214ENST00000530886 BICD2Q8TD16 824 aa9.38□□□□□ -0.91
CSDE1-214ENST00000530886 VEZTQ9HBM0 779 aa9.38□□□□□ -0.91
CSDE1-214ENST00000530886 STK26Q9P289 416 aa9.38□□□□□ -0.91
CSDE1-214ENST00000530886 POGZQ7Z3K3 1410 aa9.38□□□□□ -0.91
CSDE1-214ENST00000530886 CHUKO15111 745 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 FSBPO95073 299 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 SEMA3FQ13275 785 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 LARP1BQ659C4 914 aaKnown RBP9.37□□□□□ -0.91
CSDE1-214ENST00000530886 CCDC83Q8IWF9 413 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 CTCFLQ8NI51 663 aaPredicted RBP9.37□□□□□ -0.91
CSDE1-214ENST00000530886 BICC1Q9H694 974 aaKnown RBP9.37□□□□□ -0.91
CSDE1-214ENST00000530886 SNRKQ9NRH2 765 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 VPS37CA5D8V6 355 aaPredicted RBP9.37□□□□□ -0.91
CSDE1-214ENST00000530886 H0YHG0 523 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 RTN2O75298 545 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 FNTAP49354 379 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 SARNPP82979 210 aaKnown RBP9.37□□□□□ -0.91
CSDE1-214ENST00000530886 NBPF3Q9H094 633 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 EPC1Q9H2F5 836 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 SOS1Q07889 1333 aaPredicted RBP9.37□□□□□ -0.91
CSDE1-214ENST00000530886 HSP90B2PQ58FF3 399 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 ISM2Q6H9L7 571 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 SRGAP1Q7Z6B7 1085 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 TATDN2Q93075 761 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 KDM3BQ7LBC6 1761 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 ECM29Q5VYK3 1845 aa9.37□□□□□ -0.91
CSDE1-214ENST00000530886 ADD1P35611 737 aaKnown RBP9.36□□□□□ -0.91
CSDE1-214ENST00000530886 BIRC2Q13490 618 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 ME3Q16798 604 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 ADCK5Q3MIX3 580 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 TPRNQ4KMQ1 711 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 SPATS2Q86XZ4 545 aaKnown RBP9.36□□□□□ -0.91
CSDE1-214ENST00000530886 PLCD4Q9BRC7 762 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 LRRCC1Q9C099 1032 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 FAM169AQ9Y6X4 670 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 DIP2AQ14689 1571 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 N4BP1O75113 896 aaKnown RBP9.36□□□□□ -0.91
CSDE1-214ENST00000530886 IFIT2P09913 472 aaKnown RBP9.36□□□□□ -0.91
CSDE1-214ENST00000530886 CPLX2Q6PUV4 134 aaKnown RBP9.36□□□□□ -0.91
CSDE1-214ENST00000530886 CEP112Q8N8E3 955 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 MAGEC3Q8TD91 643 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 AFAP1L1Q8TED9 768 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 FAM204AQ9H8W3 233 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 ARHGAP6O43182 974 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 MYO1BO43795 1136 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 ADCY2Q08462 1091 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 CASP8Q14790 479 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 FAM43BQ6ZT52 329 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms