RNA–Protein interactions for RNA: ENST00000530714.6

PAX6-223, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-223	ENST00000530714	SNED1	Q8TER0	1413 aa		14.02	□□□□□ -0.16
PAX6-223	ENST00000530714	KLRG2	A4D1S0	409 aa	Predicted RBP	14.02	□□□□□ -0.17
PAX6-223	ENST00000530714	GTF2E1	P29083	439 aa	Predicted RBP	14.02	□□□□□ -0.17
PAX6-223	ENST00000530714	IGHMBP2	P38935	993 aa	Known RBP	14.02	□□□□□ -0.17
PAX6-223	ENST00000530714	SYNE4	Q8N205	404 aa		14.02	□□□□□ -0.17
PAX6-223	ENST00000530714	ZNF784	Q8NCA9	323 aa	Predicted RBP	14.02	□□□□□ -0.17
PAX6-223	ENST00000530714	CCDC85A	Q96PX6	553 aa	Predicted RBP	14.02	□□□□□ -0.17
PAX6-223	ENST00000530714	CDC5L	Q99459	802 aa	Known RBP	14.02	□□□□□ -0.17
PAX6-223	ENST00000530714	MPHOSPH8	Q99549	860 aa		14.02	□□□□□ -0.17
PAX6-223	ENST00000530714	ANP32E	Q9BTT0	268 aa		14.02	□□□□□ -0.17
PAX6-223	ENST00000530714	FAM177B	A6PVY3	158 aa		14.01	□□□□□ -0.17
PAX6-223	ENST00000530714	HCLS1	P14317	486 aa	Predicted RBP	14.01	□□□□□ -0.17
PAX6-223	ENST00000530714	MCM2	P49736	904 aa		14.01	□□□□□ -0.17
PAX6-223	ENST00000530714	TIMM10	P62072	90 aa		14.01	□□□□□ -0.17
PAX6-223	ENST00000530714	ST5	P78524	1137 aa		14.01	□□□□□ -0.17
PAX6-223	ENST00000530714	ATP2B3	Q16720	1220 aa		14.01	□□□□□ -0.17
PAX6-223	ENST00000530714	DALRD3	Q5D0E6	543 aa	Known RBP	14.01	□□□□□ -0.17
PAX6-223	ENST00000530714	TTC39A	Q5SRH9	613 aa		14.01	□□□□□ -0.17
PAX6-223	ENST00000530714	NBPF5P	Q86XG9	351 aa	Predicted RBP	14.01	□□□□□ -0.17
PAX6-223	ENST00000530714	C2CD5	Q86YS7	1000 aa		14.01	□□□□□ -0.17
PAX6-223	ENST00000530714	IL17RA	Q96F46	866 aa		14.01	□□□□□ -0.17
PAX6-223	ENST00000530714	MYH13	Q9UKX3	1938 aa		14	□□□□□ -0.17
PAX6-223	ENST00000530714	TAF1	P21675	1872 aa		14	□□□□□ -0.17
PAX6-223	ENST00000530714		K7ELQ4	463 aa	Predicted RBP	14	□□□□□ -0.17
PAX6-223	ENST00000530714	PDE8B	O95263	885 aa		14	□□□□□ -0.17
PAX6-223	ENST00000530714	IFIT1	P09914	478 aa	Known RBP	14	□□□□□ -0.17
PAX6-223	ENST00000530714	HSPA4	P34932	840 aa		14	□□□□□ -0.17
PAX6-223	ENST00000530714	PDE6B	P35913	854 aa		14	□□□□□ -0.17
PAX6-223	ENST00000530714	SLC10A5	Q5PT55	438 aa		14	□□□□□ -0.17
PAX6-223	ENST00000530714	TPTE2	Q6XPS3	522 aa		14	□□□□□ -0.17
PAX6-223	ENST00000530714	CCDC24	Q8N4L8	307 aa		14	□□□□□ -0.17
PAX6-223	ENST00000530714	SNRK	Q9NRH2	765 aa		14	□□□□□ -0.17
PAX6-223	ENST00000530714	HSP90AA1	P07900	732 aa	Known RBP	13.99	□□□□□ -0.17
PAX6-223	ENST00000530714	SRGN	P10124	158 aa		13.99	□□□□□ -0.17
PAX6-223	ENST00000530714	SF3B3	Q15393	1217 aa	Known RBP	13.99	□□□□□ -0.17
PAX6-223	ENST00000530714	PUM3	Q15397	648 aa	Known RBP	13.99	□□□□□ -0.17
PAX6-223	ENST00000530714	KBTBD3	Q8NAB2	608 aa		13.99	□□□□□ -0.17
PAX6-223	ENST00000530714	XAGE2	Q96GT9	111 aa		13.99	□□□□□ -0.17
PAX6-223	ENST00000530714	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.99	□□□□□ -0.17
PAX6-223	ENST00000530714	DNAJC2	Q99543	621 aa	Known RBP	13.99	□□□□□ -0.17
PAX6-223	ENST00000530714	PAG1	Q9NWQ8	432 aa		13.99	□□□□□ -0.17
PAX6-223	ENST00000530714	LTBP1	Q14766	1721 aa		13.98	□□□□□ -0.17
PAX6-223	ENST00000530714		H0YIN7	160 aa		13.98	□□□□□ -0.17
PAX6-223	ENST00000530714	UQCRFS1P1	P0C7P4	283 aa		13.98	□□□□□ -0.17
PAX6-223	ENST00000530714	SLC5A1	P13866	664 aa		13.98	□□□□□ -0.17
PAX6-223	ENST00000530714	NMI	Q13287	307 aa	Predicted RBP	13.98	□□□□□ -0.17
PAX6-223	ENST00000530714	CRY2	Q49AN0	593 aa		13.98	□□□□□ -0.17
PAX6-223	ENST00000530714	STYK1	Q6J9G0	422 aa		13.98	□□□□□ -0.17
PAX6-223	ENST00000530714	TTLL6	Q8N841	843 aa		13.98	□□□□□ -0.17
PAX6-223	ENST00000530714	LPIN2	Q92539	896 aa		13.98	□□□□□ -0.17
PAX6-223	ENST00000530714	NLRP3	Q96P20	1036 aa		13.98	□□□□□ -0.17
PAX6-223	ENST00000530714	LSG1	Q9H089	658 aa	Known RBP	13.98	□□□□□ -0.17
PAX6-223	ENST00000530714	COL4A1	P02462	1669 aa		13.98	□□□□□ -0.17
PAX6-223	ENST00000530714	DOCK2	Q92608	1830 aa		13.97	□□□□□ -0.17
PAX6-223	ENST00000530714	CCDC171	Q6TFL3	1326 aa		13.97	□□□□□ -0.17
PAX6-223	ENST00000530714	ZFY	P08048	801 aa	Predicted RBP	13.97	□□□□□ -0.17
PAX6-223	ENST00000530714	TTF1	Q15361	905 aa	Predicted RBP	13.97	□□□□□ -0.17
PAX6-223	ENST00000530714	ERFE	Q4G0M1	354 aa		13.97	□□□□□ -0.17
PAX6-223	ENST00000530714	RNF20	Q5VTR2	975 aa		13.97	□□□□□ -0.17
PAX6-223	ENST00000530714	ANKRD18A	Q8IVF6	992 aa		13.97	□□□□□ -0.17
PAX6-223	ENST00000530714	VGLL2	Q8N8G2	317 aa		13.97	□□□□□ -0.17
PAX6-223	ENST00000530714	HELLS	Q9NRZ9	838 aa		13.97	□□□□□ -0.17
PAX6-223	ENST00000530714	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.97	□□□□□ -0.17
PAX6-223	ENST00000530714	NFKBIE	O00221	500 aa		13.96	□□□□□ -0.17
PAX6-223	ENST00000530714	NPHP1	O15259	732 aa		13.96	□□□□□ -0.17
PAX6-223	ENST00000530714	ZKSCAN1	P17029	563 aa	Predicted RBP	13.96	□□□□□ -0.17
PAX6-223	ENST00000530714	KCNJ4	P48050	445 aa		13.96	□□□□□ -0.17
PAX6-223	ENST00000530714	MCMDC2	Q4G0Z9	681 aa		13.96	□□□□□ -0.17
PAX6-223	ENST00000530714	ZSCAN25	Q6NSZ9	544 aa		13.96	□□□□□ -0.17
PAX6-223	ENST00000530714	MED23	Q9ULK4	1368 aa		13.96	□□□□□ -0.18
PAX6-223	ENST00000530714	LTBP3	Q9NS15	1303 aa		13.95	□□□□□ -0.18
PAX6-223	ENST00000530714	GOLIM4	O00461	696 aa		13.95	□□□□□ -0.18
PAX6-223	ENST00000530714	PRELP	P51888	382 aa		13.95	□□□□□ -0.18
PAX6-223	ENST00000530714	PRPF40B	Q6NWY9	871 aa	Known RBP	13.95	□□□□□ -0.18
PAX6-223	ENST00000530714	MASTL	Q96GX5	879 aa		13.95	□□□□□ -0.18
PAX6-223	ENST00000530714	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
PAX6-223	ENST00000530714	CHMP5	Q9NZZ3	219 aa		13.95	□□□□□ -0.18
PAX6-223	ENST00000530714	HMG20B	Q9P0W2	317 aa		13.95	□□□□□ -0.18
PAX6-223	ENST00000530714	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.95	□□□□□ -0.18
PAX6-223	ENST00000530714	NPR1	P16066	1061 aa		13.94	□□□□□ -0.18
PAX6-223	ENST00000530714	NEK4	P51957	841 aa		13.94	□□□□□ -0.18
PAX6-223	ENST00000530714	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
PAX6-223	ENST00000530714	DDX46	Q7L014	1031 aa	Known RBP	13.94	□□□□□ -0.18
PAX6-223	ENST00000530714	C7orf43	Q8WVR3	580 aa		13.94	□□□□□ -0.18
PAX6-223	ENST00000530714	MAP4K1	Q92918	833 aa		13.94	□□□□□ -0.18
PAX6-223	ENST00000530714	WDR90	Q96KV7	1748 aa		13.94	□□□□□ -0.18
PAX6-223	ENST00000530714	FAM227B	Q96M60	508 aa		13.94	□□□□□ -0.18
PAX6-223	ENST00000530714	SLK	Q9H2G2	1235 aa	Predicted RBP	13.94	□□□□□ -0.18
PAX6-223	ENST00000530714	DUOX1	Q9NRD9	1551 aa		13.94	□□□□□ -0.18
PAX6-223	ENST00000530714	BSDC1	Q9NW68	430 aa	Predicted RBP	13.94	□□□□□ -0.18
PAX6-223	ENST00000530714	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.93	□□□□□ -0.18
PAX6-223	ENST00000530714		A0A0D9SFI3	127 aa		13.93	□□□□□ -0.18
PAX6-223	ENST00000530714	RNF113A	O15541	343 aa	Known RBP	13.93	□□□□□ -0.18
PAX6-223	ENST00000530714	FGFR2	P21802	821 aa		13.93	□□□□□ -0.18
PAX6-223	ENST00000530714	PSMA5	P28066	241 aa		13.93	□□□□□ -0.18
PAX6-223	ENST00000530714	ARID4A	P29374	1257 aa	Predicted RBP	13.93	□□□□□ -0.18
PAX6-223	ENST00000530714	ADORA1	P30542	326 aa		13.93	□□□□□ -0.18
PAX6-223	ENST00000530714	RASSF7	Q02833	373 aa		13.93	□□□□□ -0.18
PAX6-223	ENST00000530714	ARHGAP27	Q6ZUM4	889 aa		13.93	□□□□□ -0.18
PAX6-223	ENST00000530714	KCNB2	Q92953	911 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms