RNA–Protein interactions for RNA: ENST00000530542.1

PICALM-213, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 5

Gene PICALM, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-213ENST00000530542 MAP3K10Q02779 954 aa7.54□□□□□ -1.2
PICALM-213ENST00000530542 RBL2Q08999 1139 aa7.54□□□□□ -1.2
PICALM-213ENST00000530542 PAK2Q13177 524 aa7.54□□□□□ -1.2
PICALM-213ENST00000530542 PCSK7Q16549 785 aa7.54□□□□□ -1.2
PICALM-213ENST00000530542 TMEM102Q8N9M5 508 aaPredicted RBP7.54□□□□□ -1.2
PICALM-213ENST00000530542 GPRASP2Q96D09 838 aa7.54□□□□□ -1.2
PICALM-213ENST00000530542 SPATA32Q96LK8 384 aa7.54□□□□□ -1.2
PICALM-213ENST00000530542 CEP44Q9C0F1 390 aa7.54□□□□□ -1.2
PICALM-213ENST00000530542 BHLHE41Q9C0J9 482 aaPredicted RBP7.54□□□□□ -1.2
PICALM-213ENST00000530542 STK17AQ9UEE5 414 aa7.54□□□□□ -1.2
PICALM-213ENST00000530542 C11orf95C9JLR9 678 aaPredicted RBP7.53□□□□□ -1.2
PICALM-213ENST00000530542 NFKBIEO00221 500 aa7.53□□□□□ -1.2
PICALM-213ENST00000530542 ATF4P18848 351 aaPredicted RBP7.53□□□□□ -1.2
PICALM-213ENST00000530542 CD33P20138 364 aa7.53□□□□□ -1.2
PICALM-213ENST00000530542 FGFR3P22607 806 aa7.53□□□□□ -1.2
PICALM-213ENST00000530542 GPLD1P80108 840 aa7.53□□□□□ -1.2
PICALM-213ENST00000530542 DHX38Q92620 1227 aaKnown RBP7.53□□□□□ -1.2
PICALM-213ENST00000530542 NXPE3Q969Y0 559 aa7.53□□□□□ -1.2
PICALM-213ENST00000530542 GTPBP3Q969Y2 492 aaKnown RBP7.53□□□□□ -1.2
PICALM-213ENST00000530542 TMEM74Q96NL1 305 aa7.53□□□□□ -1.2
PICALM-213ENST00000530542 SPON2Q9BUD6 331 aa7.53□□□□□ -1.2
PICALM-213ENST00000530542 DACH1Q9UI36 760 aa7.53□□□□□ -1.2
PICALM-213ENST00000530542 LOC102724428A0A0B4J2F2 783 aa7.52□□□□□ -1.21
PICALM-213ENST00000530542 GRIA4P48058 902 aa7.52□□□□□ -1.21
PICALM-213ENST00000530542 SIK1P57059 783 aa7.52□□□□□ -1.21
PICALM-213ENST00000530542 RPS26P11Q5JNZ5 115 aaPredicted RBP7.52□□□□□ -1.21
PICALM-213ENST00000530542 SOGA3Q5TF21 947 aa7.52□□□□□ -1.21
PICALM-213ENST00000530542 FOXR1Q6PIV2 292 aa7.52□□□□□ -1.21
PICALM-213ENST00000530542 DPH6Q7L8W6 267 aa7.52□□□□□ -1.21
PICALM-213ENST00000530542 KIAA0825Q8IV33 1275 aa7.52□□□□□ -1.21
PICALM-213ENST00000530542 SEC16BQ96JE7 1060 aa7.52□□□□□ -1.21
PICALM-213ENST00000530542 TRIM47Q96LD4 638 aa7.52□□□□□ -1.21
PICALM-213ENST00000530542 NSUN5Q96P11 429 aaKnown RBP7.52□□□□□ -1.21
PICALM-213ENST00000530542 TRERF1Q96PN7 1200 aa7.52□□□□□ -1.21
PICALM-213ENST00000530542 ZBTB42B2RXF5 422 aa7.51□□□□□ -1.21
PICALM-213ENST00000530542 FGRP09769 529 aa7.51□□□□□ -1.21
PICALM-213ENST00000530542 ACPPP15309 386 aa7.51□□□□□ -1.21
PICALM-213ENST00000530542 GBP2P32456 591 aaPredicted RBP7.51□□□□□ -1.21
PICALM-213ENST00000530542 EIF4A3P38919 411 aaKnown RBP7.51□□□□□ -1.21
PICALM-213ENST00000530542 RAB44Q7Z6P3 723 aaPredicted RBP7.51□□□□□ -1.21
PICALM-213ENST00000530542 MCF2L2Q86YR7 1114 aa7.51□□□□□ -1.21
PICALM-213ENST00000530542 DNAJC2Q99543 621 aaKnown RBP7.51□□□□□ -1.21
PICALM-213ENST00000530542 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.51□□□□□ -1.212e-9■■■□□ 17.6
PICALM-213ENST00000530542 HIRIP3Q9BW71 556 aaPredicted RBP7.51□□□□□ -1.21
PICALM-213ENST00000530542 PBX4Q9BYU1 374 aa7.51□□□□□ -1.21
PICALM-213ENST00000530542 KCNQ5Q9NR82 932 aa7.51□□□□□ -1.21
PICALM-213ENST00000530542 GMPR2Q9P2T1 348 aaKnown RBP7.51□□□□□ -1.21
PICALM-213ENST00000530542 A0A096LPE4 126 aa7.5□□□□□ -1.21
PICALM-213ENST00000530542 A0A1W2PPZ6 126 aa7.5□□□□□ -1.21
PICALM-213ENST00000530542 MINDY4BA8MYZ0 360 aa7.5□□□□□ -1.21
PICALM-213ENST00000530542 PDE2AO00408 941 aaPredicted RBP7.5□□□□□ -1.21
PICALM-213ENST00000530542 CANXP27824 592 aaKnown RBP7.5□□□□□ -1.21
PICALM-213ENST00000530542 INSM1Q01101 510 aaPredicted RBP7.5□□□□□ -1.21
PICALM-213ENST00000530542 TPTE2Q6XPS3 522 aa7.5□□□□□ -1.21
PICALM-213ENST00000530542 NECAB3Q96P71 396 aaPredicted RBP7.5□□□□□ -1.21
PICALM-213ENST00000530542 TRIM56Q9BRZ2 755 aaKnown RBP7.5□□□□□ -1.21
PICALM-213ENST00000530542 RBSNQ9H1K0 784 aa7.5□□□□□ -1.21
PICALM-213ENST00000530542 ADAMTS1Q9UHI8 967 aa7.5□□□□□ -1.21
PICALM-213ENST00000530542 PRR12Q9ULL5 1215 aa7.5□□□□□ -1.21
PICALM-213ENST00000530542 TRPA1O75762 1119 aa7.49□□□□□ -1.21
PICALM-213ENST00000530542 GHRHP01286 108 aa7.49□□□□□ -1.21
PICALM-213ENST00000530542 FAM177A1Q8N128 213 aaPredicted RBP7.49□□□□□ -1.21
PICALM-213ENST00000530542 NT5C1AQ9BXI3 368 aa7.49□□□□□ -1.21
PICALM-213ENST00000530542 LNPKQ9C0E8 428 aa7.49□□□□□ -1.21
PICALM-213ENST00000530542 AVENQ9NQS1 362 aaPredicted RBP7.49□□□□□ -1.21
PICALM-213ENST00000530542 SEC31BQ9NQW1 1179 aa7.49□□□□□ -1.21
PICALM-213ENST00000530542 J3QW42 95 aa7.48□□□□□ -1.21
PICALM-213ENST00000530542 SIN3BO75182 1162 aa7.48□□□□□ -1.21
PICALM-213ENST00000530542 FBXO24O75426 580 aa7.48□□□□□ -1.21
PICALM-213ENST00000530542 STK10O94804 968 aaKnown RBP7.48□□□□□ -1.21
PICALM-213ENST00000530542 LIG3P49916 1009 aa7.48□□□□□ -1.21
PICALM-213ENST00000530542 RPS26P62854 115 aaKnown RBP7.48□□□□□ -1.21
PICALM-213ENST00000530542 CTBSQ01459 385 aa7.48□□□□□ -1.21
PICALM-213ENST00000530542 SPRED3Q2MJR0 410 aa7.48□□□□□ -1.21
PICALM-213ENST00000530542 ZNF468Q5VIY5 522 aaPredicted RBP7.48□□□□□ -1.21
PICALM-213ENST00000530542 NOP9Q86U38 636 aaKnown RBP7.48□□□□□ -1.21
PICALM-213ENST00000530542 PHC3Q8NDX5 983 aa7.48□□□□□ -1.21
PICALM-213ENST00000530542 ZNF296Q8WUU4 475 aaPredicted RBP7.48□□□□□ -1.21
PICALM-213ENST00000530542 RHOVQ96L33 236 aa7.48□□□□□ -1.21
PICALM-213ENST00000530542 HHIPQ96QV1 700 aa7.48□□□□□ -1.21
PICALM-213ENST00000530542 RASSF4Q9H2L5 321 aa7.48□□□□□ -1.21
PICALM-213ENST00000530542 ZNF576Q9H609 170 aa7.48□□□□□ -1.21
PICALM-213ENST00000530542 METTL12A8MUP2 240 aa7.47□□□□□ -1.21
PICALM-213ENST00000530542 ENC1O14682 589 aa7.47□□□□□ -1.21
PICALM-213ENST00000530542 GREM1O60565 184 aa7.47□□□□□ -1.21
PICALM-213ENST00000530542 LMNB2Q03252 620 aa7.47□□□□□ -1.21
PICALM-213ENST00000530542 NFX1Q12986 1120 aaKnown RBP7.47□□□□□ -1.21
PICALM-213ENST00000530542 COL9A2Q14055 689 aaPredicted RBP7.47□□□□□ -1.21
PICALM-213ENST00000530542 SYT9Q86SS6 491 aa7.47□□□□□ -1.21
PICALM-213ENST00000530542 ASAP3Q8TDY4 903 aa7.47□□□□□ -1.21
PICALM-213ENST00000530542 EAF1Q96JC9 268 aaPredicted RBP7.47□□□□□ -1.21
PICALM-213ENST00000530542 UBE2OQ9C0C9 1292 aaKnown RBP7.47□□□□□ -1.21
PICALM-213ENST00000530542 DNAJB12Q9NXW2 375 aaKnown RBP7.47□□□□□ -1.21
PICALM-213ENST00000530542 SUPT16HQ9Y5B9 1047 aaKnown RBP7.47□□□□□ -1.21
PICALM-213ENST00000530542 PPFIA3O75145 1194 aa7.46□□□□□ -1.22
PICALM-213ENST00000530542 SMNDC1O75940 238 aaKnown RBP eCLIP7.46□□□□□ -1.22
PICALM-213ENST00000530542 CELA3AP09093 270 aa7.46□□□□□ -1.22
PICALM-213ENST00000530542 MAP3K11Q16584 847 aa7.46□□□□□ -1.22
PICALM-213ENST00000530542 TTBK2Q6IQ55 1244 aa7.46□□□□□ -1.22
PICALM-213ENST00000530542 FBXL19Q6PCT2 694 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms