RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 WTAPQ15007 396 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 RUFY3Q7L099 469 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 CCDC91Q7Z6B0 441 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 MAST1Q9Y2H9 1570 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 IGSF3O75054 1194 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 GPATCH11Q8N954 259 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 ESR2Q92731 530 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 TRIM47Q96LD4 638 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 RNF216Q9NWF9 866 aaPredicted RBP17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 TUBBP07437 444 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 CCDC172P0C7W6 258 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 CCDC96Q2M329 555 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 CALM1P0DP23 149 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 CALM2P0DP24 149 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 CALM3P0DP25 149 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 HSP90AA4PQ58FG1 418 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 IPO4Q8TEX9 1081 aaKnown RBP17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 IFNKQ9P0W0 207 aa17.6■□□□□ 0.41
PCDHA4-203ENST00000530339 TMCO5BA8MYB1 307 aa17.6■□□□□ 0.41
PCDHA4-203ENST00000530339 GSTTP1A0A1W2PQM5 241 aa17.6■□□□□ 0.41
PCDHA4-203ENST00000530339 MARCKSP29966 332 aaPredicted RBP17.6■□□□□ 0.41
PCDHA4-203ENST00000530339 CCDC40Q4G0X9 1142 aa17.6■□□□□ 0.41
PCDHA4-203ENST00000530339 ZFP91Q96JP5 570 aaPredicted RBP17.6■□□□□ 0.41
PCDHA4-203ENST00000530339 GOLGA6L10A0A0M3HER8 536 aa17.6■□□□□ 0.41
PCDHA4-203ENST00000530339 ATP5J2-PTCD1G3V325 749 aa17.6■□□□□ 0.41
PCDHA4-203ENST00000530339 SSR1P43307 286 aaKnown RBP17.6■□□□□ 0.41
PCDHA4-203ENST00000530339 RRAGBQ5VZM2 374 aa17.6■□□□□ 0.41
PCDHA4-203ENST00000530339 SPECC1LQ69YQ0 1117 aa17.6■□□□□ 0.41
PCDHA4-203ENST00000530339 PZPP20742 1482 aa17.59■□□□□ 0.41
PCDHA4-203ENST00000530339 TSPY2A6NKD2 308 aa17.59■□□□□ 0.41
PCDHA4-203ENST00000530339 MSH6P52701 1360 aa17.59■□□□□ 0.41
PCDHA4-203ENST00000530339 HOXB7P09629 217 aa17.59■□□□□ 0.41
PCDHA4-203ENST00000530339 IDEP14735 1019 aa17.59■□□□□ 0.41
PCDHA4-203ENST00000530339 LMBRD1Q9NUN5 540 aa17.59■□□□□ 0.41
PCDHA4-203ENST00000530339 HLA-DOAP06340 250 aa17.59■□□□□ 0.41
PCDHA4-203ENST00000530339 GTF2A1P52655 376 aaPredicted RBP17.59■□□□□ 0.41
PCDHA4-203ENST00000530339 ATP2B3Q16720 1220 aa17.59■□□□□ 0.41
PCDHA4-203ENST00000530339 TRAPPC8Q9Y2L5 1435 aa17.58■□□□□ 0.41
PCDHA4-203ENST00000530339 RIOK3O14730 519 aaKnown RBP17.58■□□□□ 0.41
PCDHA4-203ENST00000530339 BBXQ8WY36 941 aaPredicted RBP17.58■□□□□ 0.41
PCDHA4-203ENST00000530339 BLMP54132 1417 aaPredicted RBP17.58■□□□□ 0.41
PCDHA4-203ENST00000530339 OPA1O60313 960 aa17.58■□□□□ 0.41
PCDHA4-203ENST00000530339 GIGYF2Q6Y7W6 1299 aaKnown RBP17.58■□□□□ 0.41
PCDHA4-203ENST00000530339 DDX12PQ92771 950 aa17.58■□□□□ 0.41
PCDHA4-203ENST00000530339 RTL9Q8NET4 1388 aa17.58■□□□□ 0.4
PCDHA4-203ENST00000530339 XAGE3Q8WTP9 111 aa17.58■□□□□ 0.4
PCDHA4-203ENST00000530339 ZMYM3Q14202 1370 aa17.58■□□□□ 0.4
PCDHA4-203ENST00000530339 AFMP43652 599 aa17.58■□□□□ 0.4
PCDHA4-203ENST00000530339 BRAPQ7Z569 592 aa17.58■□□□□ 0.4
PCDHA4-203ENST00000530339 UBA5Q9GZZ9 404 aa17.58■□□□□ 0.4
PCDHA4-203ENST00000530339 NOP2P46087 812 aaKnown RBP17.57■□□□□ 0.4
PCDHA4-203ENST00000530339 ERMNQ8TAM6 284 aa17.57■□□□□ 0.4
PCDHA4-203ENST00000530339 ZCRB1Q8TBF4 217 aaKnown RBP17.57■□□□□ 0.4
PCDHA4-203ENST00000530339 KIF24Q5T7B8 1368 aa17.57■□□□□ 0.4
PCDHA4-203ENST00000530339 RTN1Q16799 776 aa17.57■□□□□ 0.4
PCDHA4-203ENST00000530339 PTPDC1A2A3K4 754 aa17.56■□□□□ 0.4
PCDHA4-203ENST00000530339 A0A1W2PP64 1363 aa17.56■□□□□ 0.4
PCDHA4-203ENST00000530339 EXOC1Q9NV70 894 aa17.56■□□□□ 0.4
PCDHA4-203ENST00000530339 KRT83P78385 493 aa17.56■□□□□ 0.4
PCDHA4-203ENST00000530339 FAM160A1Q05DH4 1040 aa17.56■□□□□ 0.4
PCDHA4-203ENST00000530339 PHACTR3Q96KR7 559 aa17.56■□□□□ 0.4
PCDHA4-203ENST00000530339 UBAP1LF5GYI3 381 aa17.56■□□□□ 0.4
PCDHA4-203ENST00000530339 MYO1BO43795 1136 aa17.56■□□□□ 0.4
PCDHA4-203ENST00000530339 GABPB1Q06547 395 aaPredicted RBP17.56■□□□□ 0.4
PCDHA4-203ENST00000530339 DHX32Q7L7V1 743 aaKnown RBP17.56■□□□□ 0.4
PCDHA4-203ENST00000530339 TICAM2Q86XR7 235 aa17.56■□□□□ 0.4
PCDHA4-203ENST00000530339 VPS18Q9P253 973 aa17.56■□□□□ 0.4
PCDHA4-203ENST00000530339 TACC1O75410 805 aa17.55■□□□□ 0.4
PCDHA4-203ENST00000530339 GPTP24298 496 aa17.55■□□□□ 0.4
PCDHA4-203ENST00000530339 COPS6Q7L5N1 327 aa17.55■□□□□ 0.4
PCDHA4-203ENST00000530339 KRT86O43790 486 aa17.55■□□□□ 0.4
PCDHA4-203ENST00000530339 CALML3P27482 149 aa17.55■□□□□ 0.4
PCDHA4-203ENST00000530339 HSPA4P34932 840 aa17.55■□□□□ 0.4
PCDHA4-203ENST00000530339 PAG1Q9NWQ8 432 aa17.55■□□□□ 0.4
PCDHA4-203ENST00000530339 EBAG9O00559 213 aa17.55■□□□□ 0.4
PCDHA4-203ENST00000530339 PRC1O43663 620 aa17.55■□□□□ 0.4
PCDHA4-203ENST00000530339 NBPF11Q86T75 865 aa17.55■□□□□ 0.4
PCDHA4-203ENST00000530339 EDC4Q6P2E9 1401 aaKnown RBP17.55■□□□□ 0.4
PCDHA4-203ENST00000530339 YTHDC2Q9H6S0 1430 aaKnown RBP17.55■□□□□ 0.4
PCDHA4-203ENST00000530339 RNF113AO15541 343 aaKnown RBP17.55■□□□□ 0.4
PCDHA4-203ENST00000530339 MTHFSDQ2M296 383 aaKnown RBP17.55■□□□□ 0.4
PCDHA4-203ENST00000530339 NEBLO76041 1014 aa17.54■□□□□ 0.4
PCDHA4-203ENST00000530339 SCLT1Q96NL6 688 aa17.54■□□□□ 0.4
PCDHA4-203ENST00000530339 PPP1R9BQ96SB3 815 aa17.54■□□□□ 0.4
PCDHA4-203ENST00000530339 PA2G4Q9UQ80 394 aaKnown RBP17.54■□□□□ 0.4
PCDHA4-203ENST00000530339 PSMA7O14818 248 aa17.54■□□□□ 0.4
PCDHA4-203ENST00000530339 CABP5Q9NP86 173 aa17.54■□□□□ 0.4
PCDHA4-203ENST00000530339 MYL5Q02045 173 aa17.54■□□□□ 0.4
PCDHA4-203ENST00000530339 OTUD7AQ8TE49 926 aaPredicted RBP17.54■□□□□ 0.4
PCDHA4-203ENST00000530339 MPHOSPH6Q99547 160 aaKnown RBP17.54■□□□□ 0.4
PCDHA4-203ENST00000530339 UTP14AQ9BVJ6 771 aaKnown RBP17.54■□□□□ 0.4
PCDHA4-203ENST00000530339 PRPF4BQ13523 1007 aaKnown RBP17.54■□□□□ 0.4
PCDHA4-203ENST00000530339 KRT24Q2M2I5 525 aa17.54■□□□□ 0.4
PCDHA4-203ENST00000530339 GTF3C6Q969F1 213 aa17.54■□□□□ 0.4
PCDHA4-203ENST00000530339 U2AF2P26368 475 aaKnown RBP eCLIP17.53■□□□□ 0.4
PCDHA4-203ENST00000530339 EVCP57679 992 aa17.53■□□□□ 0.4
PCDHA4-203ENST00000530339 KARSQ15046 597 aaKnown RBP17.53■□□□□ 0.4
PCDHA4-203ENST00000530339 IFIT1BQ5T764 474 aaKnown RBP17.53■□□□□ 0.4
PCDHA4-203ENST00000530339 TCERG1LQ5VWI1 586 aa17.53■□□□□ 0.4
PCDHA4-203ENST00000530339 TMEM87AQ8NBN3 555 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 197.3 ms