RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 SETDB1Q15047 1291 aa8.9□□□□□ -0.98
USP47-209ENST00000530041 ADAMTSL4Q6UY14 1074 aa8.9□□□□□ -0.98
USP47-209ENST00000530041 TXNRD3Q86VQ6 643 aa8.9□□□□□ -0.98
USP47-209ENST00000530041 DCAF11Q8TEB1 546 aa8.9□□□□□ -0.98
USP47-209ENST00000530041 POP1Q99575 1024 aaKnown RBP8.9□□□□□ -0.98
USP47-209ENST00000530041 DZANK1Q9NVP4 752 aa8.9□□□□□ -0.98
USP47-209ENST00000530041 NFKBIEO00221 500 aa8.89□□□□□ -0.99
USP47-209ENST00000530041 EREGO14944 169 aa8.89□□□□□ -0.99
USP47-209ENST00000530041 BRD1O95696 1058 aa8.89□□□□□ -0.99
USP47-209ENST00000530041 PTPRAP18433 802 aa8.89□□□□□ -0.99
USP47-209ENST00000530041 ADAM19Q9H013 955 aa8.89□□□□□ -0.99
USP47-209ENST00000530041 TPSG1Q9NRR2 321 aa8.89□□□□□ -0.99
USP47-209ENST00000530041 LINC01387J3KSC0 135 aa8.88□□□□□ -0.99
USP47-209ENST00000530041 NDUFB5O43674 189 aa8.88□□□□□ -0.99
USP47-209ENST00000530041 EDN3P14138 238 aa8.88□□□□□ -0.99
USP47-209ENST00000530041 ACPPP15309 386 aa8.88□□□□□ -0.99
USP47-209ENST00000530041 ZFYVE28Q9HCC9 887 aa8.88□□□□□ -0.99
USP47-209ENST00000530041 FAM177BA6PVY3 158 aa8.87□□□□□ -0.99
USP47-209ENST00000530041 PDE2AO00408 941 aaPredicted RBP8.87□□□□□ -0.99
USP47-209ENST00000530041 GNEQ9Y223 722 aaKnown RBP8.87□□□□□ -0.99
USP47-209ENST00000530041 AMOTL2Q9Y2J4 779 aa8.87□□□□□ -0.99
USP47-209ENST00000530041 EPHA1P21709 976 aa8.86□□□□□ -0.99
USP47-209ENST00000530041 TMEM102Q8N9M5 508 aaPredicted RBP8.86□□□□□ -0.99
USP47-209ENST00000530041 WFDC12Q8WWY7 111 aa8.86□□□□□ -0.99
USP47-209ENST00000530041 CITED4Q96RK1 184 aa8.86□□□□□ -0.99
USP47-209ENST00000530041 OSMRQ99650 979 aa8.86□□□□□ -0.99
USP47-209ENST00000530041 MRPL18Q9H0U6 180 aaKnown RBP8.86□□□□□ -0.99
USP47-209ENST00000530041 SH2B1Q9NRF2 756 aaPredicted RBP8.86□□□□□ -0.99
USP47-209ENST00000530041 SOWAHDA6NJG2 315 aa8.85□□□□□ -0.99
USP47-209ENST00000530041 TRPA1O75762 1119 aa8.85□□□□□ -0.99
USP47-209ENST00000530041 PDE3BQ13370 1112 aa8.85□□□□□ -0.99
USP47-209ENST00000530041 RSPO4Q2I0M5 234 aaPredicted RBP8.85□□□□□ -0.99
USP47-209ENST00000530041 NKAPLQ5M9Q1 402 aa8.85□□□□□ -0.99
USP47-209ENST00000530041 FAM117BQ6P1L5 589 aa8.85□□□□□ -0.99
USP47-209ENST00000530041 TXNDC11Q6PKC3 985 aa8.85□□□□□ -0.99
USP47-209ENST00000530041 GALNT11Q8NCW6 608 aa8.85□□□□□ -0.99
USP47-209ENST00000530041 FAM129BQ96TA1 746 aa8.85□□□□□ -0.99
USP47-209ENST00000530041 ZKSCAN3Q9BRR0 538 aa8.85□□□□□ -0.99
USP47-209ENST00000530041 FSCN2O14926 492 aa8.84□□□□□ -0.99
USP47-209ENST00000530041 NEFLP07196 543 aa8.84□□□□□ -0.99
USP47-209ENST00000530041 NOS3P29474 1203 aa8.84□□□□□ -0.99
USP47-209ENST00000530041 CDC25BP30305 580 aa8.84□□□□□ -0.99
USP47-209ENST00000530041 IREB2P48200 963 aaKnown RBP8.84□□□□□ -0.99
USP47-209ENST00000530041 TMEM130Q8N3G9 435 aa8.84□□□□□ -0.99
USP47-209ENST00000530041 NXPE3Q969Y0 559 aa8.84□□□□□ -0.99
USP47-209ENST00000530041 HHIPQ96QV1 700 aa8.84□□□□□ -0.99
USP47-209ENST00000530041 SSBP4Q9BWG4 385 aaPredicted RBP8.84□□□□□ -0.99
USP47-209ENST00000530041 H3BRJ5 948 aa8.83□□□□□ -1
USP47-209ENST00000530041 TM4SF5O14894 197 aa8.83□□□□□ -1
USP47-209ENST00000530041 CABP4P57796 275 aa8.83□□□□□ -1
USP47-209ENST00000530041 PEAR1Q5VY43 1037 aaPredicted RBP8.83□□□□□ -1
USP47-209ENST00000530041 KLHL23Q8NBE8 558 aa8.83□□□□□ -1
USP47-209ENST00000530041 SEMA6BQ9H3T3 888 aa8.83□□□□□ -1
USP47-209ENST00000530041 AKTIPQ9H8T0 292 aa8.83□□□□□ -1
USP47-209ENST00000530041 F8W735 103 aaPredicted RBP8.82□□□□□ -1
USP47-209ENST00000530041 CD68P34810 354 aaPredicted RBP8.82□□□□□ -1
USP47-209ENST00000530041 WNT8BQ93098 351 aa8.82□□□□□ -1
USP47-209ENST00000530041 CARD10Q9BWT7 1032 aa8.82□□□□□ -1
USP47-209ENST00000530041 LATS2Q9NRM7 1088 aa8.82□□□□□ -1
USP47-209ENST00000530041 SOX13Q9UN79 622 aa8.82□□□□□ -1
USP47-209ENST00000530041 H2AFB1P0C5Y9 115 aa8.81□□□□□ -1
USP47-209ENST00000530041 H2AFB2P0C5Z0 115 aa8.81□□□□□ -1
USP47-209ENST00000530041 PIP4K2BP78356 416 aa8.81□□□□□ -1
USP47-209ENST00000530041 FOXD4L6Q3SYB3 417 aaPredicted RBP8.81□□□□□ -1
USP47-209ENST00000530041 FOXD4L3Q6VB84 417 aaPredicted RBP8.81□□□□□ -1
USP47-209ENST00000530041 GALNT12Q8IXK2 581 aa8.81□□□□□ -1
USP47-209ENST00000530041 BSNDQ8WZ55 320 aa8.81□□□□□ -1
USP47-209ENST00000530041 TP53INP1Q96A56 240 aa8.81□□□□□ -1
USP47-209ENST00000530041 BHLHE41Q9C0J9 482 aaPredicted RBP8.81□□□□□ -1
USP47-209ENST00000530041 SEC31BQ9NQW1 1179 aa8.81□□□□□ -1
USP47-209ENST00000530041 DYRK3O43781 588 aa8.8□□□□□ -1
USP47-209ENST00000530041 POLR3DP05423 398 aaPredicted RBP8.8□□□□□ -1
USP47-209ENST00000530041 OSGEPQ9NPF4 335 aa8.8□□□□□ -1
USP47-209ENST00000530041 ALX3O95076 343 aa8.79□□□□□ -1
USP47-209ENST00000530041 IGHA2P01877 340 aa8.79□□□□□ -1
USP47-209ENST00000530041 ITGB7P26010 798 aa8.79□□□□□ -1
USP47-209ENST00000530041 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.79□□□□□ -1
USP47-209ENST00000530041 DZIP1LQ8IYY4 767 aaKnown RBP8.79□□□□□ -1
USP47-209ENST00000530041 TMC1Q8TDI8 760 aa8.79□□□□□ -1
USP47-209ENST00000530041 MEGF10Q96KG7 1140 aa8.79□□□□□ -1
USP47-209ENST00000530041 RBCK1Q9BYM8 510 aa8.79□□□□□ -1
USP47-209ENST00000530041 KCNK4Q9NYG8 393 aa8.79□□□□□ -1
USP47-209ENST00000530041 GPR182O15218 404 aa8.78□□□□□ -1
USP47-209ENST00000530041 CPNE3O75131 537 aaKnown RBP8.78□□□□□ -1
USP47-209ENST00000530041 ORC1Q13415 861 aa8.78□□□□□ -1
USP47-209ENST00000530041 USPL1Q5W0Q7 1092 aa8.78□□□□□ -1
USP47-209ENST00000530041 Q6ZS46 218 aa8.78□□□□□ -1
USP47-209ENST00000530041 KLHDC7BQ96G42 594 aa8.78□□□□□ -1
USP47-209ENST00000530041 DMRTB1Q96MA1 342 aa8.78□□□□□ -1
USP47-209ENST00000530041 BIN2Q9UBW5 565 aaPredicted RBP8.78□□□□□ -1
USP47-209ENST00000530041 A0A1W2PP55 124 aa8.77□□□□□ -1.01
USP47-209ENST00000530041 WISP1O95388 367 aa8.77□□□□□ -1.01
USP47-209ENST00000530041 KCNA1Q09470 495 aa8.77□□□□□ -1.01
USP47-209ENST00000530041 VN1R5Q7Z5H4 357 aa8.77□□□□□ -1.01
USP47-209ENST00000530041 ASAP3Q8TDY4 903 aa8.77□□□□□ -1.01
USP47-209ENST00000530041 ALKBH8Q96BT7 664 aaKnown RBP8.77□□□□□ -1.01
USP47-209ENST00000530041 NIF3L1Q9GZT8 377 aa8.77□□□□□ -1.01
USP47-209ENST00000530041 DNAJC25Q9H1X3 360 aa8.77□□□□□ -1.01
USP47-209ENST00000530041 DDX3YO15523 660 aaKnown RBP8.76□□□□□ -1.01
USP47-209ENST00000530041 ADAM11O75078 769 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms